Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10d04
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   1.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   5.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 425 HLLAYDQSFHLYKVHHLHWRLAF 493
           H LAY +      +HH HW L +
Sbjct: 192 HRLAYFREDLGINLHHWHWHLVY 214


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +2

Query: 443 QSFHLYKVHHLHWRLAFGN*SLRVHQPLRTRLHKISDLRYNSPP 574
           +S+H  + HH   R   G+ S  + +   +R+  ++  R   PP
Sbjct: 790 RSYHQQQSHHYGRRERSGSESSSISERCSSRVESLTPERKMEPP 833


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 425 HLLAYDQSFHLYKVHHLHWRLAF 493
           H +AY +      +HH HW L +
Sbjct: 192 HRVAYWREDIGLNLHHWHWHLVY 214


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 742 IIMYFMRITEIVWRTFIRFSILA 674
           +  Y+++   ++W TF  + ILA
Sbjct: 194 LAQYYLQADMLLWHTFGYYHILA 216


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 742 IIMYFMRITEIVWRTFIRFSILA 674
           +  Y+++   ++W TF  + ILA
Sbjct: 194 LAQYYLQADMLLWHTFGYYHILA 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,544
Number of Sequences: 336
Number of extensions: 4810
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)