Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10d04
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122075-1|AAM52587.1|  503|Drosophila melanogaster AT17506p pro...    31   1.9  
AJ252082-1|CAB64385.1|  979|Drosophila melanogaster BAB-I protei...    31   1.9  
AE014296-173|AAS64927.1|  526|Drosophila melanogaster CG9097-PA,...    31   1.9  
AE014296-172|AAF47439.2|  977|Drosophila melanogaster CG9097-PB,...    31   1.9  
X80468-1|CAA56640.1|  805|Drosophila melanogaster serine threoni...    31   2.5  
X55759-1|CAA39285.1|  297|Drosophila melanogaster serine/threoni...    31   2.5  
L34782-1|AAA28552.1|  805|Drosophila melanogaster serine/threoni...    31   2.5  
BT023514-1|AAY84914.1|  827|Drosophila melanogaster LD03657p pro...    31   2.5  
AE014298-2752|AAF48871.1|  805|Drosophila melanogaster CG6551-PA...    31   2.5  

>AY122075-1|AAM52587.1|  503|Drosophila melanogaster AT17506p
           protein.
          Length = 503

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 650 TSLGNGVYLSPELSATIPHSHGGFGWGASCIGG 552
           + LG G    P L    PH HGG G G   +GG
Sbjct: 424 SGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGG 456


>AJ252082-1|CAB64385.1|  979|Drosophila melanogaster BAB-I protein
           protein.
          Length = 979

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 650 TSLGNGVYLSPELSATIPHSHGGFGWGASCIGG 552
           + LG G    P L    PH HGG G G   +GG
Sbjct: 447 SGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGG 479


>AE014296-173|AAS64927.1|  526|Drosophila melanogaster CG9097-PA,
           isoform A protein.
          Length = 526

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 650 TSLGNGVYLSPELSATIPHSHGGFGWGASCIGG 552
           + LG G    P L    PH HGG G G   +GG
Sbjct: 447 SGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGG 479


>AE014296-172|AAF47439.2|  977|Drosophila melanogaster CG9097-PB,
           isoform B protein.
          Length = 977

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 650 TSLGNGVYLSPELSATIPHSHGGFGWGASCIGG 552
           + LG G    P L    PH HGG G G   +GG
Sbjct: 447 SGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGG 479


>X80468-1|CAA56640.1|  805|Drosophila melanogaster serine threonine
           kinase protein.
          Length = 805

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = -1

Query: 689 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 558
           + +FGL +++   T +     G  +Y++PEL A  P+ H    W   CI
Sbjct: 141 LCDFGLARNMTLGTHVLTSIKGTPLYMAPELLADEPYDHHADMWSLGCI 189


>X55759-1|CAA39285.1|  297|Drosophila melanogaster serine/threonine
           protein kinase protein.
          Length = 297

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = -1

Query: 689 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 558
           + +FGL +++   T +     G  +Y++PEL A  P+ H    W   CI
Sbjct: 165 LCDFGLARNMTLGTHVLTSIKGTPLYMAPELLADEPYDHHADMWSLGCI 213


>L34782-1|AAA28552.1|  805|Drosophila melanogaster serine/threonine
           kinase protein.
          Length = 805

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = -1

Query: 689 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 558
           + +FGL +++   T +     G  +Y++PEL A  P+ H    W   CI
Sbjct: 141 LCDFGLARNMTLGTHVLTSIKGTPLYMAPELLADEPYDHHADMWSLGCI 189


>BT023514-1|AAY84914.1|  827|Drosophila melanogaster LD03657p
           protein.
          Length = 827

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = -1

Query: 689 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 558
           + +FGL +++   T +     G  +Y++PEL A  P+ H    W   CI
Sbjct: 163 LCDFGLARNMTLGTHVLTSIKGTPLYMAPELLAEQPYDHHADMWSLGCI 211


>AE014298-2752|AAF48871.1|  805|Drosophila melanogaster CG6551-PA
           protein.
          Length = 805

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = -1

Query: 689 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 558
           + +FGL +++   T +     G  +Y++PEL A  P+ H    W   CI
Sbjct: 141 LCDFGLARNMTLGTHVLTSIKGTPLYMAPELLAEQPYDHHADMWSLGCI 189


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,200,317
Number of Sequences: 53049
Number of extensions: 837163
Number of successful extensions: 2264
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2264
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)