Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10d02
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 419 e-117
03_01_0034 + 318432-318825,318902-319851 417 e-117
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 417 e-117
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 417 e-117
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 417 e-117
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 416 e-117
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 415 e-116
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 409 e-114
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 186 2e-47
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 181 6e-46
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 180 8e-46
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 180 1e-45
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 108 4e-24
03_06_0181 - 32180321-32180491,32180849-32181010 29 3.0
08_02_1008 - 23508377-23508541,23508940-23509116 29 5.2
03_06_0386 + 33555682-33556344,33557138-33557299 29 5.2
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 28 6.9
09_02_0204 - 5768596-5768793,5769857-5770006,5770407-5770583 28 9.1
07_01_0756 + 5819367-5820038,5820847-5821005 28 9.1
05_04_0035 + 17378541-17381276 28 9.1
05_01_0120 - 828834-831143 28 9.1
02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117 28 9.1
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 419 bits (1032), Expect = e-117
Identities = 188/216 (87%), Positives = 209/216 (96%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
LKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT
Sbjct: 215 LKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT 274
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
SRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+Q
Sbjct: 275 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQ 334
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAF 207
NKNSSYFVEWIPNNVK++VCDIPPRGLKM+ATF+GN+T+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 335 NKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAF 394
Query: 206 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
LHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 395 LHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 417 bits (1027), Expect = e-117
Identities = 188/216 (87%), Positives = 208/216 (96%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
LKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT
Sbjct: 215 LKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT 274
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
SRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+Q
Sbjct: 275 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQ 334
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAF 207
NKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 335 NKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAF 394
Query: 206 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 395 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 417 bits (1027), Expect = e-117
Identities = 187/216 (86%), Positives = 209/216 (96%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
LKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT
Sbjct: 236 LKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT 295
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
SRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+Q
Sbjct: 296 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ 355
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAF 207
NKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGN+T+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 356 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAF 415
Query: 206 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 416 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 451
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 417 bits (1027), Expect = e-117
Identities = 187/216 (86%), Positives = 209/216 (96%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
LKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT
Sbjct: 215 LKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT 274
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
SRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+Q
Sbjct: 275 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ 334
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAF 207
NKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGN+T+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 335 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAF 394
Query: 206 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 395 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 417 bits (1026), Expect = e-117
Identities = 186/216 (86%), Positives = 209/216 (96%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
LKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT
Sbjct: 395 LKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT 454
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
SRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+Q
Sbjct: 455 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ 514
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAF 207
NKNSSYFVEWIPNNVK++VCDIPPRGL M++TF+GN+T+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 515 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAF 574
Query: 206 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 575 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 610
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 416 bits (1025), Expect = e-117
Identities = 187/216 (86%), Positives = 208/216 (96%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
LKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT
Sbjct: 215 LKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT 274
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
SRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+Q
Sbjct: 275 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQ 334
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAF 207
NKNSSYFVEWIPNNVK++VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 335 NKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAF 394
Query: 206 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
LHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 395 LHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 415 bits (1022), Expect = e-116
Identities = 187/216 (86%), Positives = 208/216 (96%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
LKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT
Sbjct: 215 LKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT 274
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
SRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+Q
Sbjct: 275 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQ 334
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAF 207
NKNSSYFVEWIPNNVK++VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 335 NKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAF 394
Query: 206 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
LHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 395 LHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 409 bits (1007), Expect = e-114
Identities = 183/216 (84%), Positives = 206/216 (95%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
LKLT P++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT
Sbjct: 231 LKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT 290
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
SRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQM+N+Q
Sbjct: 291 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQ 350
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAF 207
NKNSSYFVEWIPNNVK++VCDIPP GL M++TF+GN+T+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 351 NKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAF 410
Query: 206 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
LHWYT EGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 411 LHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDATA 446
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 186 bits (452), Expect = 2e-47
Identities = 83/218 (38%), Positives = 131/218 (60%), Gaps = 8/218 (3%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF + +AP+
Sbjct: 217 LDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVI 276
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
S + LSVPE+T +F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+
Sbjct: 277 SAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIK 336
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFT 231
K + FV+W P K + PP ++ + I N TA+ E+F RI +F
Sbjct: 337 TKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFD 396
Query: 230 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 117
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 181 bits (440), Expect = 6e-46
Identities = 82/218 (37%), Positives = 129/218 (59%), Gaps = 8/218 (3%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+
Sbjct: 217 LDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVI 276
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
S + LSV E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+
Sbjct: 277 SAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIK 336
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFT 231
K + FV+W P K + PP ++ + I N+T++ E+F RI +F
Sbjct: 337 TKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFD 396
Query: 230 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 117
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 LMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 180 bits (439), Expect = 8e-46
Identities = 80/218 (36%), Positives = 131/218 (60%), Gaps = 8/218 (3%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF + +AP+
Sbjct: 298 LDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPII 357
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
S + SVPE+T +F+ ++MA CDPRHG+Y+ ++RG + K+V+ + +I+
Sbjct: 358 SVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIK 417
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPPRG--------LKMSATFIGNTTAIQELFKRISEQFT 231
+ + FV+W P K + PP ++ + I N TA+ E+F RI +F
Sbjct: 418 TRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFD 477
Query: 230 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 117
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 478 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 180 bits (437), Expect = 1e-45
Identities = 82/218 (37%), Positives = 129/218 (59%), Gaps = 8/218 (3%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+
Sbjct: 217 LDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVI 276
Query: 566 SRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQ 387
S + LSV E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+
Sbjct: 277 SAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIK 336
Query: 386 NKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFT 231
K + FV+W P K + PP ++ + I N+T++ E+F RI +F
Sbjct: 337 TKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFD 396
Query: 230 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 117
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 LMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 108 bits (260), Expect = 4e-24
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 10/219 (4%)
Frame = -1
Query: 746 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT 567
L L PT+ N LVS MS TT LR+PG +N DL L +++P PR HF M G+ PLT
Sbjct: 218 LHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLT 277
Query: 566 -SRGSQQYRALSVPELTQQMFDAKNMMAACDPRH-----GRYLTVAAVFRGRMSMKEVDE 405
R R +V ++ +++ KN+M + R+ +Y+++ + +G + +V E
Sbjct: 278 VERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHE 337
Query: 404 QMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAM 225
+ I+ + F+EW P +++S + N T+I+ LF + Q+ +
Sbjct: 338 SLQRIRERKLVNFIEW------------GPASIQVSGLMLANHTSIRHLFSKCLGQYEKL 385
Query: 224 FRRKAFLHWYTG----EGMDEMEFTEAESNMNDLVSEYQ 120
+++AFL Y E D EF E+ + LV EY+
Sbjct: 386 RKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>03_06_0181 - 32180321-32180491,32180849-32181010
Length = 110
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 449 RRSDIYHGEGHRQPSCSWHQTFAASAPAQIE 541
R+ ++HGEG R+ S + +Q+F +SA Q++
Sbjct: 20 RQLQLFHGEGLRRLSPASYQSFCSSACGQVD 50
>08_02_1008 - 23508377-23508541,23508940-23509116
Length = 113
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 180 HTLPRVPVQESFSSEHGCKLFRNSFKQLLDSCGV 281
H + RV +E S+ GC + + +LD CGV
Sbjct: 51 HDIERVRNKEQLSTRVGCGRVHSIIENILDKCGV 84
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 616 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 726
T +F K+ F C +TPD +TK+ KSP+
Sbjct: 213 TKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSPF 249
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +1
Query: 394 LSICSSTSFIDIRPRKTAA--TVRYLPWRGSQAAIMFLASNICCVSSGTDRARYCWLPRE 567
LS SF+ ++P + ++PW S++C V+ G+D A W ++
Sbjct: 332 LSGQKKVSFLPVKPHTKGIINNINFMPW-----------SDVCFVTGGSDHAVILWQEKD 380
Query: 568 VNGAKPGIKKCNLGNGTMLTASF-RKSAFSCPGNRKHVVTPDIVA 699
+ + K + M A +KS G+ K +++ D+ A
Sbjct: 381 DSWNHKKVHKDLHSSAVMGVAGLQQKSTILSVGSDKRIISFDLAA 425
>09_02_0204 - 5768596-5768793,5769857-5770006,5770407-5770583
Length = 174
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 180 HTLPRVPVQESFSSEHGCKLFRNSFKQLLDSCGV 281
H + RV +E ++ GC + + +LD CGV
Sbjct: 51 HDIERVCNKEQLNTRVGCSRVHSIIENILDKCGV 84
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 616 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 726
T +F K+ F C +TPD ET++ K+P+
Sbjct: 216 TKTLGNFVKATFDCLMKTYGFLTPDFWRETRFIKTPF 252
>05_04_0035 + 17378541-17381276
Length = 911
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 417 LHRHPSAENGSDGQISTMARVTGSHHVL 500
LH HPS + S S A + +HH+L
Sbjct: 16 LHPHPSLSSSSSSTASPAAAASATHHLL 43
>05_01_0120 - 828834-831143
Length = 769
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 626 PLVSANRRSVVLGIASTWSHQTLSLKPNGSSPHTLGL 736
P +S + S I+S +S + SL P+ SSP +LGL
Sbjct: 502 PFLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGL 538
>02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117
Length = 386
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 559 PREVNGAKPGIKKCNLGNGTMLTASFRKSAFSCPGNRKHVVTPDIVAE 702
PR N +PG+ + + NG F + + PG R V+ P +V +
Sbjct: 192 PRRTNSVRPGVAENLVKNG-----DFEEGPYIIPGTRWGVLIPSMVVD 234
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,744,236
Number of Sequences: 37544
Number of extensions: 490192
Number of successful extensions: 1336
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -