Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10d01
(807 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8IPJ1 Cluster: CG17377-PC, isoform C; n=6; melanogaste... 71 3e-11
UniRef50_UPI0000E49E54 Cluster: PREDICTED: similar to MGC108253 ... 35 2.1
UniRef50_Q60AD9 Cluster: Beta-ketoacyl synthase domain protein; ... 35 2.1
UniRef50_Q9A3Z5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_P51521 Cluster: Protein ovo; n=10; cellular organisms|R... 33 6.4
UniRef50_Q0E3Z3 Cluster: Os02g0147100 protein; n=2; Oryza sativa... 33 8.5
UniRef50_Q0E3Y8 Cluster: Os02g0147700 protein; n=5; Oryza sativa... 33 8.5
UniRef50_A5B779 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
>UniRef50_Q8IPJ1 Cluster: CG17377-PC, isoform C; n=6; melanogaster
subgroup|Rep: CG17377-PC, isoform C - Drosophila
melanogaster (Fruit fly)
Length = 287
Score = 71.3 bits (167), Expect = 3e-11
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -1
Query: 327 KSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPS 184
+SRELR GIMY +C C+KRNGLQ C R+ C G P CL P P C P+
Sbjct: 14 RSRELRCGIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61
>UniRef50_UPI0000E49E54 Cluster: PREDICTED: similar to MGC108253
protein, partial; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to MGC108253 protein,
partial - Strongylocentrotus purpuratus
Length = 1302
Score = 35.1 bits (77), Expect = 2.1
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 432 QHY-GFRKKKSADGNSGAEEGGSKKKDENENQLKRTKSRELR 310
QH G K+K ++ +SG EEGG + + E E+++KR +LR
Sbjct: 174 QHQSGGLKRKLSEMSSGGEEGGDEDEKEEEDKMKRDAMEQLR 215
>UniRef50_Q60AD9 Cluster: Beta-ketoacyl synthase domain protein;
n=15; Proteobacteria|Rep: Beta-ketoacyl synthase domain
protein - Methylococcus capsulatus
Length = 266
Score = 35.1 bits (77), Expect = 2.1
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = -1
Query: 210 LPDPLCAPSQLARARGLADPAALSAHLQNQEGSSSGRAEV------SGSTGGNRFIVCE 52
+P P+C P+ R G + AL+A LQ EGS A + SG G N I+CE
Sbjct: 41 VPPPVCLPAAERRRAGTSIKLALAAGLQALEGSGRDPATLPTVFASSGGDGDNCHIICE 99
>UniRef50_Q9A3Z5 Cluster: Putative uncharacterized protein; n=1;
Caulobacter vibrioides|Rep: Putative uncharacterized
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 738
Score = 34.7 bits (76), Expect = 2.8
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = -1
Query: 249 RRTGCSGEPTCLA--LPDPLCAPSQLARARGLADPAALSA---HLQNQEGSSSGRAEVSG 85
RR G G P C +PD C PS + R G+ P+A S+ GS S RA
Sbjct: 667 RRAGTQGRPLCAGPWVPDRPCGPSGMTRCFGVKRPSASSSSGPRSWGPPGSRSRRARPRA 726
Query: 84 STGGN 70
S G+
Sbjct: 727 SCPGS 731
>UniRef50_P51521 Cluster: Protein ovo; n=10; cellular organisms|Rep:
Protein ovo - Drosophila melanogaster (Fruit fly)
Length = 1351
Score = 33.5 bits (73), Expect = 6.4
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAALSAHLQN--QEGSSSGRAEVSG 85
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 980 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAA--AAAAAHLQRPMSSSSSSGGTNSSN 1037
Query: 84 STGGN 70
S+GG+
Sbjct: 1038 SSGGS 1042
>UniRef50_Q0E3Z3 Cluster: Os02g0147100 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os02g0147100 protein -
Oryza sativa subsp. japonica (Rice)
Length = 407
Score = 33.1 bits (72), Expect = 8.5
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = -1
Query: 201 PLCAPSQLARARGLADPAALSAHLQNQEGSSSGRAEVSGSTGGNRFIVCELKGIVLGTSA 22
PL P ++ R++ L + S L G+ GR +S S GN+ ++ +LKG + ++
Sbjct: 246 PLIIPDKIQRSKALIECDGDSIDLSGDVGAV-GRIIISNSPNGNQELLLDLKGTIYKSTI 304
Query: 21 NTSEKCC 1
S C
Sbjct: 305 VPSRTFC 311
>UniRef50_Q0E3Y8 Cluster: Os02g0147700 protein; n=5; Oryza
sativa|Rep: Os02g0147700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 342
Score = 33.1 bits (72), Expect = 8.5
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = -1
Query: 201 PLCAPSQLARARGLADPAALSAHLQNQEGSSSGRAEVSGSTGGNRFIVCELKGIVLGTSA 22
PL P ++ R++ L + S L G+ GR +S S GN+ ++ +LKG + ++
Sbjct: 163 PLIIPDKIQRSKALIECDGDSIDLSGDVGAV-GRIIISNSPNGNQELLLDLKGTIYKSTI 221
Query: 21 NTSEKCC 1
S C
Sbjct: 222 VPSRTFC 228
>UniRef50_A5B779 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 909
Score = 33.1 bits (72), Expect = 8.5
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -1
Query: 441 ATSQHYGFRKKKSADG--NSGAEEGGSKKKDENENQLKRTKSRELRGGIMYYSC-HCIKR 271
A Q RK++S +G + AE G K +N N+ K K + + G Y C HC K
Sbjct: 198 AQEQRRMIRKEESMEGALQAKAENSGGGKDKKNNNKKKNNKIDKNKDGT-YPPCPHCKKT 256
Query: 270 NGLQHDC 250
N Q C
Sbjct: 257 NHPQRKC 263
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 804,133,665
Number of Sequences: 1657284
Number of extensions: 16485238
Number of successful extensions: 50785
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 47345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50630
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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