Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10d01
(807 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060765-1|AAL28313.1| 108|Drosophila melanogaster GH22881p pro... 71 1e-12
AE014134-1175|AAN10602.2| 108|Drosophila melanogaster CG17377-P... 71 1e-12
AE014134-1174|AAN10601.1| 287|Drosophila melanogaster CG17377-P... 71 1e-12
AE014134-1173|AAF52442.3| 173|Drosophila melanogaster CG17377-P... 71 1e-12
AY119649-1|AAM50303.1| 975|Drosophila melanogaster RE46053p pro... 33 0.35
AY094838-1|AAM11191.1| 1351|Drosophila melanogaster LD47350p pro... 33 0.35
AE014298-702|AAF46002.2| 975|Drosophila melanogaster CG6824-PA,... 33 0.35
AE014298-701|ABC67174.1| 1028|Drosophila melanogaster CG6824-PD,... 33 0.35
AE014298-700|AAF46003.2| 1222|Drosophila melanogaster CG6824-PC,... 33 0.35
AE014298-699|AAF46001.2| 1351|Drosophila melanogaster CG6824-PB,... 33 0.35
X59772-1|CAB36921.1| 850|Drosophila melanogaster ovo protein pr... 33 0.46
U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa pro... 33 0.46
AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein... 33 0.46
AJ430588-1|CAD23206.1| 1354|Drosophila melanogaster shavenbaby p... 33 0.46
X67704-2|CAA47942.1| 265|Drosophila melanogaster sperm protein ... 31 2.5
AY118617-1|AAM49986.1| 265|Drosophila melanogaster LP10995p pro... 31 2.5
AY060667-1|AAL28215.1| 334|Drosophila melanogaster GH09231p pro... 31 2.5
AE014297-4222|AAF56780.1| 265|Drosophila melanogaster CG18396-P... 31 2.5
AE014297-4221|AAF56779.1| 334|Drosophila melanogaster CG11719-P... 31 2.5
X67704-1|CAA47941.1| 334|Drosophila melanogaster sperm protein ... 29 5.7
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro... 29 7.5
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P... 29 7.5
BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p pro... 29 9.9
AY119029-1|AAM50889.1| 507|Drosophila melanogaster LP05465p pro... 29 9.9
AE014296-2533|AAF49620.2| 1217|Drosophila melanogaster CG7439-PC... 29 9.9
AE014296-2532|AAF49619.2| 1214|Drosophila melanogaster CG7439-PB... 29 9.9
AE014134-2443|AAF53364.2| 620|Drosophila melanogaster CG8942-PA... 29 9.9
>AY060765-1|AAL28313.1| 108|Drosophila melanogaster GH22881p
protein.
Length = 108
Score = 71.3 bits (167), Expect = 1e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -1
Query: 327 KSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPS 184
+SRELR GIMY +C C+KRNGLQ C R+ C G P CL P P C P+
Sbjct: 14 RSRELRCGIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61
>AE014134-1175|AAN10602.2| 108|Drosophila melanogaster CG17377-PB,
isoform B protein.
Length = 108
Score = 71.3 bits (167), Expect = 1e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -1
Query: 327 KSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPS 184
+SRELR GIMY +C C+KRNGLQ C R+ C G P CL P P C P+
Sbjct: 14 RSRELRCGIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61
>AE014134-1174|AAN10601.1| 287|Drosophila melanogaster CG17377-PC,
isoform C protein.
Length = 287
Score = 71.3 bits (167), Expect = 1e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -1
Query: 327 KSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPS 184
+SRELR GIMY +C C+KRNGLQ C R+ C G P CL P P C P+
Sbjct: 14 RSRELRCGIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61
>AE014134-1173|AAF52442.3| 173|Drosophila melanogaster CG17377-PA,
isoform A protein.
Length = 173
Score = 71.3 bits (167), Expect = 1e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -1
Query: 327 KSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPS 184
+SRELR GIMY +C C+KRNGLQ C R+ C G P CL P P C P+
Sbjct: 14 RSRELRCGIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61
>AY119649-1|AAM50303.1| 975|Drosophila melanogaster RE46053p
protein.
Length = 975
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAALSAHLQN--QEGSSSGRAEVSG 85
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 426 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAA--AAAAAHLQRPMSSSSSSGGTNSSN 483
Query: 84 STGGN 70
S+GG+
Sbjct: 484 SSGGS 488
>AY094838-1|AAM11191.1| 1351|Drosophila melanogaster LD47350p protein.
Length = 1351
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAALSAHLQN--QEGSSSGRAEVSG 85
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 980 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAA--AAAAAHLQRPMSSSSSSGGTNSSN 1037
Query: 84 STGGN 70
S+GG+
Sbjct: 1038 SSGGS 1042
>AE014298-702|AAF46002.2| 975|Drosophila melanogaster CG6824-PA,
isoform A protein.
Length = 975
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAALSAHLQN--QEGSSSGRAEVSG 85
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 426 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAA--AAAAAHLQRPMSSSSSSGGTNSSN 483
Query: 84 STGGN 70
S+GG+
Sbjct: 484 SSGGS 488
>AE014298-701|ABC67174.1| 1028|Drosophila melanogaster CG6824-PD,
isoform D protein.
Length = 1028
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAALSAHLQN--QEGSSSGRAEVSG 85
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 479 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAA--AAAAAHLQRPMSSSSSSGGTNSSN 536
Query: 84 STGGN 70
S+GG+
Sbjct: 537 SSGGS 541
>AE014298-700|AAF46003.2| 1222|Drosophila melanogaster CG6824-PC,
isoform C protein.
Length = 1222
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAALSAHLQN--QEGSSSGRAEVSG 85
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 851 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAA--AAAAAHLQRPMSSSSSSGGTNSSN 908
Query: 84 STGGN 70
S+GG+
Sbjct: 909 SSGGS 913
>AE014298-699|AAF46001.2| 1351|Drosophila melanogaster CG6824-PB,
isoform B protein.
Length = 1351
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAALSAHLQN--QEGSSSGRAEVSG 85
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 980 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAA--AAAAAHLQRPMSSSSSSGGTNSSN 1037
Query: 84 STGGN 70
S+GG+
Sbjct: 1038 SSGGS 1042
>X59772-1|CAB36921.1| 850|Drosophila melanogaster ovo protein
protein.
Length = 850
Score = 33.1 bits (72), Expect = 0.46
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAAL-SAHLQN--QEGSSSGRAEVS 88
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 476 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAAAAAAAAAAHLQRPMSSSSSSGGTNSS 535
Query: 87 GSTGGN 70
S+GG+
Sbjct: 536 NSSGGS 541
>U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa
protein.
Length = 1028
Score = 33.1 bits (72), Expect = 0.46
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAAL-SAHLQN--QEGSSSGRAEVS 88
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 476 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAAAAAAAAAAHLQRPMSSSSSSGGTNSS 535
Query: 87 GSTGGN 70
S+GG+
Sbjct: 536 NSSGGS 541
>AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein
protein.
Length = 1222
Score = 33.1 bits (72), Expect = 0.46
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAAL-SAHLQN--QEGSSSGRAEVS 88
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 848 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAAAAAAAAAAHLQRPMSSSSSSGGTNSS 907
Query: 87 GSTGGN 70
S+GG+
Sbjct: 908 NSSGGS 913
>AJ430588-1|CAD23206.1| 1354|Drosophila melanogaster shavenbaby
protein.
Length = 1354
Score = 33.1 bits (72), Expect = 0.46
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -1
Query: 258 HDCRRTGCSGEPTCLALPDPLCAPSQLARARGLADPAAL-SAHLQN--QEGSSSGRAEVS 88
H G + + ++LP P A + A A A AA +AHLQ SSSG S
Sbjct: 980 HHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAAAAAAAAAAHLQRPMSSSSSSGGTNSS 1039
Query: 87 GSTGGN 70
S+GG+
Sbjct: 1040 NSSGGS 1045
>X67704-2|CAA47942.1| 265|Drosophila melanogaster sperm protein
protein.
Length = 265
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 704 MCTPCGPMVCYKYEDCGPPLQCLPR--SAFKRNGLQDC 597
MC+PCGP C + C P +C P+ +A + L C
Sbjct: 1 MCSPCGP--CSPCDPCCGPFECSPKCYNAAQLEALPQC 36
>AY118617-1|AAM49986.1| 265|Drosophila melanogaster LP10995p
protein.
Length = 265
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 704 MCTPCGPMVCYKYEDCGPPLQCLPR--SAFKRNGLQDC 597
MC+PCGP C + C P +C P+ +A + L C
Sbjct: 1 MCSPCGP--CSPCDPCCGPFECSPKCYNAAQLEALPQC 36
>AY060667-1|AAL28215.1| 334|Drosophila melanogaster GH09231p
protein.
Length = 334
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 704 MCTPCGPMVCYKYEDCGPPLQCLPR--SAFKRNGLQDC 597
MC+PCGP C + C P +C P+ +A + L C
Sbjct: 1 MCSPCGP--CSPCDPCCGPFECSPKCYNAAQLEALPQC 36
Score = 29.5 bits (63), Expect = 5.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 701 CTPCGPMVCYKYEDCGPPLQCLP 633
C PC P Y+ +CGP C P
Sbjct: 287 CGPCSPPCPYESPECGPCYPCAP 309
>AE014297-4222|AAF56780.1| 265|Drosophila melanogaster CG18396-PA
protein.
Length = 265
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 704 MCTPCGPMVCYKYEDCGPPLQCLPR--SAFKRNGLQDC 597
MC+PCGP C + C P +C P+ +A + L C
Sbjct: 1 MCSPCGP--CSPCDPCCGPFECSPKCYNAAQLEALPQC 36
>AE014297-4221|AAF56779.1| 334|Drosophila melanogaster CG11719-PA
protein.
Length = 334
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 704 MCTPCGPMVCYKYEDCGPPLQCLPR--SAFKRNGLQDC 597
MC+PCGP C + C P +C P+ +A + L C
Sbjct: 1 MCSPCGP--CSPCDPCCGPFECSPKCYNAAQLEALPQC 36
Score = 29.5 bits (63), Expect = 5.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 701 CTPCGPMVCYKYEDCGPPLQCLP 633
C PC P Y+ +CGP C P
Sbjct: 287 CGPCSPPCPYESPECGPCYPCAP 309
>X67704-1|CAA47941.1| 334|Drosophila melanogaster sperm protein
protein.
Length = 334
Score = 29.5 bits (63), Expect = 5.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 701 CTPCGPMVCYKYEDCGPPLQCLP 633
C PC P Y+ +CGP C P
Sbjct: 287 CGPCSPPCPYESPECGPCYPCAP 309
>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p protein.
Length = 1872
Score = 29.1 bits (62), Expect = 7.5
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -1
Query: 414 KKKSADGNSGAEEGGSKKKDENENQLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGC 235
K++S DG G+ G + + K +GG+ C C + L CRR+ C
Sbjct: 1459 KRRSPDGQGGSTAGSGGLAKSSSQEFLEDKDNVKKGGL----CGCCSK--LFMPCRRSRC 1512
Query: 234 S 232
S
Sbjct: 1513 S 1513
>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
protein.
Length = 1831
Score = 29.1 bits (62), Expect = 7.5
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -1
Query: 414 KKKSADGNSGAEEGGSKKKDENENQLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGC 235
K++S DG G+ G + + K +GG+ C C + L CRR+ C
Sbjct: 1457 KRRSPDGQGGSTAGSGGLAKSSSQEFLEDKDNVKKGGL----CGCCSK--LFMPCRRSRC 1510
Query: 234 S 232
S
Sbjct: 1511 S 1511
>BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p
protein.
Length = 1214
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 207 PDPLCAPSQLARARGLADPAALSAHLQNQEGSSSGRAEVSGSTGGNR 67
P L P QL + + L P +Q+ S R + S S+GG+R
Sbjct: 34 PQQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQSSRQQPSTSSGGSR 80
>AY119029-1|AAM50889.1| 507|Drosophila melanogaster LP05465p
protein.
Length = 507
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 707 IMCTPCGPMVCYKYEDCGPPLQCLPRSAFKRNGLQD 600
I C P P VC K E C P C ++ +KR D
Sbjct: 122 IDCHPVCPTVCGKNEFCDRPGVCSCQNGYKRTSPSD 157
>AE014296-2533|AAF49620.2| 1217|Drosophila melanogaster CG7439-PC,
isoform C protein.
Length = 1217
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 207 PDPLCAPSQLARARGLADPAALSAHLQNQEGSSSGRAEVSGSTGGNR 67
P L P QL + + L P +Q+ S R + S S+GG+R
Sbjct: 37 PQQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQSSRQQPSTSSGGSR 83
>AE014296-2532|AAF49619.2| 1214|Drosophila melanogaster CG7439-PB,
isoform B protein.
Length = 1214
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 207 PDPLCAPSQLARARGLADPAALSAHLQNQEGSSSGRAEVSGSTGGNR 67
P L P QL + + L P +Q+ S R + S S+GG+R
Sbjct: 34 PQQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQSSRQQPSTSSGGSR 80
>AE014134-2443|AAF53364.2| 620|Drosophila melanogaster CG8942-PA
protein.
Length = 620
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 707 IMCTPCGPMVCYKYEDCGPPLQCLPRSAFKRNGLQD 600
I C P P VC K E C P C ++ +KR D
Sbjct: 122 IDCHPVCPTVCGKNEFCDRPGVCSCQNGYKRTSPSD 157
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,069,901
Number of Sequences: 53049
Number of extensions: 798800
Number of successful extensions: 2761
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2743
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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