Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10c24
(826 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341231-1|AAR13795.1| 231|Anopheles gambiae vacuolar ATPase pr... 25 3.7
AY341230-1|AAR13794.1| 231|Anopheles gambiae vacuolar ATPase pr... 25 3.7
AY341229-1|AAR13793.1| 231|Anopheles gambiae vacuolar ATPase pr... 25 3.7
AY341228-1|AAR13792.1| 231|Anopheles gambiae vacuolar ATPase pr... 25 3.7
AY341227-1|AAR13791.1| 231|Anopheles gambiae vacuolar ATPase pr... 25 3.7
AY341226-1|AAR13790.1| 231|Anopheles gambiae vacuolar ATPase pr... 25 3.7
AY341225-1|AAR13789.1| 231|Anopheles gambiae vacuolar ATPase pr... 25 3.7
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 24 4.9
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 24 4.9
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 4.9
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 8.6
>AY341231-1|AAR13795.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 24.6 bits (51), Expect = 3.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -1
Query: 463 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 287
R GR + + + + +P DD+T P P T + + + +YP V+ L
Sbjct: 173 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVL 231
>AY341230-1|AAR13794.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 24.6 bits (51), Expect = 3.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -1
Query: 463 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 287
R GR + + + + +P DD+T P P T + + + +YP V+ L
Sbjct: 173 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVL 231
>AY341229-1|AAR13793.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 24.6 bits (51), Expect = 3.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -1
Query: 463 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 287
R GR + + + + +P DD+T P P T + + + +YP V+ L
Sbjct: 173 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVL 231
>AY341228-1|AAR13792.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 24.6 bits (51), Expect = 3.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -1
Query: 463 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 287
R GR + + + + +P DD+T P P T + + + +YP V+ L
Sbjct: 173 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVL 231
>AY341227-1|AAR13791.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 24.6 bits (51), Expect = 3.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -1
Query: 463 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 287
R GR + + + + +P DD+T P P T + + + +YP V+ L
Sbjct: 173 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVL 231
>AY341226-1|AAR13790.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 24.6 bits (51), Expect = 3.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -1
Query: 463 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 287
R GR + + + + +P DD+T P P T + + + +YP V+ L
Sbjct: 173 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVL 231
>AY341225-1|AAR13789.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 24.6 bits (51), Expect = 3.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -1
Query: 463 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 287
R GR + + + + +P DD+T P P T + + + +YP V+ L
Sbjct: 173 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVL 231
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 24.2 bits (50), Expect = 4.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 391 LTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLDSTSR 272
+ +P P + F HLD +T A AEL P++ D +R
Sbjct: 117 IANPNPRSPFRHLDFST---SATAELRRNPSLSAPDECAR 153
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 24.2 bits (50), Expect = 4.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 391 LTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLDSTSR 272
+ +P P + F HLD +T A AEL P++ D +R
Sbjct: 117 IANPNPRSPFRHLDFST---SATAELRRNPSLSAPDECAR 153
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.2 bits (50), Expect = 4.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 538 TTVSPGPPRLGSAQPRSPGQGHP 606
T P PPR G P+ PG P
Sbjct: 205 TPTQPQPPRPGGMYPQPPGVPMP 227
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 8.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 632 FWPYTRDARVSSSYSGEDYFEELLIIAAHIYIFK 733
+WP T D +S EEL IAAH+ I K
Sbjct: 418 YWPETDDVDSGASDFDRVTPEELQEIAAHMAIRK 451
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,160
Number of Sequences: 2352
Number of extensions: 14361
Number of successful extensions: 55
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -