Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10c23
(787 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U63383-1|AAC16970.1| 145|Homo sapiens 6-pyruvoyl-tetrahydropter... 107 6e-23
M97655-1|AAA51541.1| 145|Homo sapiens 6-pyruvoyltetrahydropteri... 107 6e-23
L76259-1|AAB64229.1| 145|Homo sapiens PTS protein. 107 6e-23
D25234-1|BAA04959.1| 145|Homo sapiens 6-pyruvoyl-tetrahydropter... 107 6e-23
D17400-1|BAA04224.1| 145|Homo sapiens 6-pyruvoyl-tetrahydropter... 107 6e-23
BC009686-1|AAH09686.1| 145|Homo sapiens 6-pyruvoyltetrahydropte... 107 6e-23
AB042297-1|BAA95486.1| 145|Homo sapiens 6-pyruvoyltetrahydropte... 107 6e-23
BC018029-1|AAH18029.1| 145|Homo sapiens 6-pyruvoyltetrahydropte... 106 1e-22
X06341-1|CAA29647.1| 243|Homo sapiens Blast-1 protein. 30 8.2
M59904-1|AAA62834.1| 243|Homo sapiens pan-leukocyte antigen pro... 30 8.2
M37766-1|AAA36211.1| 243|Homo sapiens MEM-102 glycoprotein prot... 30 8.2
CR457012-1|CAG33293.1| 243|Homo sapiens CD48 protein. 30 8.2
BT019813-1|AAV38616.1| 243|Homo sapiens CD48 antigen (B-cell me... 30 8.2
BC016182-1|AAH16182.1| 243|Homo sapiens CD48 molecule protein. 30 8.2
AL121985-3|CAC00578.1| 243|Homo sapiens CD48 molecule protein. 30 8.2
>U63383-1|AAC16970.1| 145|Homo sapiens 6-pyruvoyl-tetrahydropterin
synthase protein.
Length = 145
Score = 107 bits (256), Expect = 6e-23
Identities = 48/90 (53%), Positives = 64/90 (71%)
Frame = -3
Query: 701 LVTXKGPVDPQTGMVMNIXDLKKYIKTAILEPLDHXNLDNDVPYFKTXASTXENVAIYVW 522
+VT G +DP TGMVMN+ DLKKY++ AI++PLDH NLD DVPYF ST ENVA+Y+W
Sbjct: 56 VVTVHGEIDPATGMVMNLADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIW 115
Query: 521 DQLQRIXEKPQXLHEXKILEXEXNXVVXRG 432
D LQ++ L++ K+ E + N VV +G
Sbjct: 116 DNLQKVL-PVGVLYKVKVYETDNNIVVYKG 144
>M97655-1|AAA51541.1| 145|Homo sapiens 6-pyruvoyltetrahydropterin
synthase protein.
Length = 145
Score = 107 bits (256), Expect = 6e-23
Identities = 48/90 (53%), Positives = 64/90 (71%)
Frame = -3
Query: 701 LVTXKGPVDPQTGMVMNIXDLKKYIKTAILEPLDHXNLDNDVPYFKTXASTXENVAIYVW 522
+VT G +DP TGMVMN+ DLKKY++ AI++PLDH NLD DVPYF ST ENVA+Y+W
Sbjct: 56 VVTVHGEIDPATGMVMNLADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIW 115
Query: 521 DQLQRIXEKPQXLHEXKILEXEXNXVVXRG 432
D LQ++ L++ K+ E + N VV +G
Sbjct: 116 DNLQKVL-PVGVLYKVKVYETDNNIVVYKG 144
>L76259-1|AAB64229.1| 145|Homo sapiens PTS protein.
Length = 145
Score = 107 bits (256), Expect = 6e-23
Identities = 48/90 (53%), Positives = 64/90 (71%)
Frame = -3
Query: 701 LVTXKGPVDPQTGMVMNIXDLKKYIKTAILEPLDHXNLDNDVPYFKTXASTXENVAIYVW 522
+VT G +DP TGMVMN+ DLKKY++ AI++PLDH NLD DVPYF ST ENVA+Y+W
Sbjct: 56 VVTVHGEIDPATGMVMNLADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIW 115
Query: 521 DQLQRIXEKPQXLHEXKILEXEXNXVVXRG 432
D LQ++ L++ K+ E + N VV +G
Sbjct: 116 DNLQKVL-PVGVLYKVKVYETDNNIVVYKG 144
>D25234-1|BAA04959.1| 145|Homo sapiens 6-pyruvoyl-tetrahydropterin
synthase protein.
Length = 145
Score = 107 bits (256), Expect = 6e-23
Identities = 48/90 (53%), Positives = 64/90 (71%)
Frame = -3
Query: 701 LVTXKGPVDPQTGMVMNIXDLKKYIKTAILEPLDHXNLDNDVPYFKTXASTXENVAIYVW 522
+VT G +DP TGMVMN+ DLKKY++ AI++PLDH NLD DVPYF ST ENVA+Y+W
Sbjct: 56 VVTVHGEIDPATGMVMNLADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIW 115
Query: 521 DQLQRIXEKPQXLHEXKILEXEXNXVVXRG 432
D LQ++ L++ K+ E + N VV +G
Sbjct: 116 DNLQKVL-PVGVLYKVKVYETDNNIVVYKG 144
>D17400-1|BAA04224.1| 145|Homo sapiens 6-pyruvoyl-tetrahydropterin
synthase protein.
Length = 145
Score = 107 bits (256), Expect = 6e-23
Identities = 48/90 (53%), Positives = 64/90 (71%)
Frame = -3
Query: 701 LVTXKGPVDPQTGMVMNIXDLKKYIKTAILEPLDHXNLDNDVPYFKTXASTXENVAIYVW 522
+VT G +DP TGMVMN+ DLKKY++ AI++PLDH NLD DVPYF ST ENVA+Y+W
Sbjct: 56 VVTVHGEIDPATGMVMNLADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIW 115
Query: 521 DQLQRIXEKPQXLHEXKILEXEXNXVVXRG 432
D LQ++ L++ K+ E + N VV +G
Sbjct: 116 DNLQKVL-PVGVLYKVKVYETDNNIVVYKG 144
>BC009686-1|AAH09686.1| 145|Homo sapiens 6-pyruvoyltetrahydropterin
synthase protein.
Length = 145
Score = 107 bits (256), Expect = 6e-23
Identities = 48/90 (53%), Positives = 64/90 (71%)
Frame = -3
Query: 701 LVTXKGPVDPQTGMVMNIXDLKKYIKTAILEPLDHXNLDNDVPYFKTXASTXENVAIYVW 522
+VT G +DP TGMVMN+ DLKKY++ AI++PLDH NLD DVPYF ST ENVA+Y+W
Sbjct: 56 VVTVHGEIDPATGMVMNLADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIW 115
Query: 521 DQLQRIXEKPQXLHEXKILEXEXNXVVXRG 432
D LQ++ L++ K+ E + N VV +G
Sbjct: 116 DNLQKVL-PVGVLYKVKVYETDNNIVVYKG 144
>AB042297-1|BAA95486.1| 145|Homo sapiens 6-pyruvoyltetrahydropterin
synthase protein.
Length = 145
Score = 107 bits (256), Expect = 6e-23
Identities = 48/90 (53%), Positives = 64/90 (71%)
Frame = -3
Query: 701 LVTXKGPVDPQTGMVMNIXDLKKYIKTAILEPLDHXNLDNDVPYFKTXASTXENVAIYVW 522
+VT G +DP TGMVMN+ DLKKY++ AI++PLDH NLD DVPYF ST ENVA+Y+W
Sbjct: 56 VVTVHGEIDPATGMVMNLADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIW 115
Query: 521 DQLQRIXEKPQXLHEXKILEXEXNXVVXRG 432
D LQ++ L++ K+ E + N VV +G
Sbjct: 116 DNLQKVL-PVGVLYKVKVYETDNNIVVYKG 144
>BC018029-1|AAH18029.1| 145|Homo sapiens 6-pyruvoyltetrahydropterin
synthase protein.
Length = 145
Score = 106 bits (254), Expect = 1e-22
Identities = 48/90 (53%), Positives = 64/90 (71%)
Frame = -3
Query: 701 LVTXKGPVDPQTGMVMNIXDLKKYIKTAILEPLDHXNLDNDVPYFKTXASTXENVAIYVW 522
+VT G +DP TGMVMN+ DLKKY++ AI++PLDH NLD DVPYF ST ENVA+Y+W
Sbjct: 56 VVTVHGEIDPATGMVMNLADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYMW 115
Query: 521 DQLQRIXEKPQXLHEXKILEXEXNXVVXRG 432
D LQ++ L++ K+ E + N VV +G
Sbjct: 116 DNLQKVL-PVGVLYKVKVYETDNNIVVYKG 144
>X06341-1|CAA29647.1| 243|Homo sapiens Blast-1 protein.
Length = 243
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = -2
Query: 705 ISCNXKGSCRSSNWYGDEYX*PQEIHKNSHPGTTRPXEFR**CSILQNXGKYXRKCRNIC 526
+SC G + WYGD+ P+E+ + T P + C Q K +C
Sbjct: 152 LSCVIPGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYS-RCYTCQVSNSVSSKNGTVC 210
Query: 525 LGP 517
L P
Sbjct: 211 LSP 213
>M59904-1|AAA62834.1| 243|Homo sapiens pan-leukocyte antigen
protein.
Length = 243
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = -2
Query: 705 ISCNXKGSCRSSNWYGDEYX*PQEIHKNSHPGTTRPXEFR**CSILQNXGKYXRKCRNIC 526
+SC G + WYGD+ P+E+ + T P + C Q K +C
Sbjct: 152 LSCVIPGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYS-RCYTCQVSNSVSSKNGTVC 210
Query: 525 LGP 517
L P
Sbjct: 211 LSP 213
>M37766-1|AAA36211.1| 243|Homo sapiens MEM-102 glycoprotein
protein.
Length = 243
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = -2
Query: 705 ISCNXKGSCRSSNWYGDEYX*PQEIHKNSHPGTTRPXEFR**CSILQNXGKYXRKCRNIC 526
+SC G + WYGD+ P+E+ + T P + C Q K +C
Sbjct: 152 LSCVIPGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYS-RCYTCQVSNSVSSKNGTVC 210
Query: 525 LGP 517
L P
Sbjct: 211 LSP 213
>CR457012-1|CAG33293.1| 243|Homo sapiens CD48 protein.
Length = 243
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = -2
Query: 705 ISCNXKGSCRSSNWYGDEYX*PQEIHKNSHPGTTRPXEFR**CSILQNXGKYXRKCRNIC 526
+SC G + WYGD+ P+E+ + T P + C Q K +C
Sbjct: 152 LSCVIPGESVNYTWYGDKRPLPKELQNSVLETTLMPHNYS-RCYTCQVSNSVSSKNGTVC 210
Query: 525 LGP 517
L P
Sbjct: 211 LSP 213
>BT019813-1|AAV38616.1| 243|Homo sapiens CD48 antigen (B-cell
membrane protein) protein.
Length = 243
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = -2
Query: 705 ISCNXKGSCRSSNWYGDEYX*PQEIHKNSHPGTTRPXEFR**CSILQNXGKYXRKCRNIC 526
+SC G + WYGD+ P+E+ + T P + C Q K +C
Sbjct: 152 LSCVIPGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYS-RCYTCQVSNSVSSKNGTVC 210
Query: 525 LGP 517
L P
Sbjct: 211 LSP 213
>BC016182-1|AAH16182.1| 243|Homo sapiens CD48 molecule protein.
Length = 243
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = -2
Query: 705 ISCNXKGSCRSSNWYGDEYX*PQEIHKNSHPGTTRPXEFR**CSILQNXGKYXRKCRNIC 526
+SC G + WYGD+ P+E+ + T P + C Q K +C
Sbjct: 152 LSCVIPGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYS-RCYTCQVSNSVSSKNGTVC 210
Query: 525 LGP 517
L P
Sbjct: 211 LSP 213
>AL121985-3|CAC00578.1| 243|Homo sapiens CD48 molecule protein.
Length = 243
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = -2
Query: 705 ISCNXKGSCRSSNWYGDEYX*PQEIHKNSHPGTTRPXEFR**CSILQNXGKYXRKCRNIC 526
+SC G + WYGD+ P+E+ + T P + C Q K +C
Sbjct: 152 LSCVIPGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYS-RCYTCQVSNSVSSKNGTVC 210
Query: 525 LGP 517
L P
Sbjct: 211 LSP 213
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,729,832
Number of Sequences: 237096
Number of extensions: 1208137
Number of successful extensions: 1395
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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