Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10c18
         (908 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D88152-1|BAA20072.1|  549|Homo sapiens acetyl-coenzyme A transpo...   233   5e-61
BC014416-1|AAH14416.1|  549|Homo sapiens SLC33A1 protein protein.     233   5e-61
AF534825-1|AAO15023.1|  166|Homo sapiens TREM-like transcript 3 ...    32   2.5  
AF016694-1|AAB71687.1|  246|Homo sapiens small intestinal mucin ...    31   5.8  

>D88152-1|BAA20072.1|  549|Homo sapiens acetyl-coenzyme A transporter
            protein.
          Length = 549

 Score =  233 bits (571), Expect = 5e-61
 Identities = 116/256 (45%), Positives = 154/256 (60%)
 Frame = -1

Query: 869  IVSAYKQLYTIVKLPAVRKLALVLFTAKLGFCAADAVSGLKLVEAGVPREDXXXXXXXXX 690
            I   YK L+ I+K+PAV    L++ TAK+GF AADAV+GLKLVE GVP+E          
Sbjct: 294  ITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMV 353

Query: 689  XVQIIMPVILAKHTTGPAPLSLWLKAFXXXXXXXXXXXXXXAFTPTLLGDSGPXXXXXXX 510
             +QII+P+I++K+T GP PL+ + KA                +TP +    G        
Sbjct: 354  PLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIV 413

Query: 509  XXXXYVFHQTCLYCMFVAVMAFFAKVSDPTVGGTYMTLLNTVSNLGTNWPSTLALWAIDH 330
                Y  HQ  +Y M+V++MAF AKVSDP +GGTYMTLLNTVSNLG NWPST+ALW +D 
Sbjct: 414  VLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDP 473

Query: 329  LTYKSCSLSKLTDNKCSSTVEAELCKSEGGTCVTEIDGYYIETVICVILGFLWLQWGRPT 150
            LT K C     ++  C +    ELCK  GG+CVT +DGYY+E++ICV +GF W  +  P 
Sbjct: 474  LTVKEC--VGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPK 531

Query: 149  INRLQRLPPSAWQISR 102
              +LQ    S+W+  R
Sbjct: 532  FKKLQDEGSSSWKCKR 547


>BC014416-1|AAH14416.1|  549|Homo sapiens SLC33A1 protein protein.
          Length = 549

 Score =  233 bits (571), Expect = 5e-61
 Identities = 116/256 (45%), Positives = 154/256 (60%)
 Frame = -1

Query: 869  IVSAYKQLYTIVKLPAVRKLALVLFTAKLGFCAADAVSGLKLVEAGVPREDXXXXXXXXX 690
            I   YK L+ I+K+PAV    L++ TAK+GF AADAV+GLKLVE GVP+E          
Sbjct: 294  ITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMV 353

Query: 689  XVQIIMPVILAKHTTGPAPLSLWLKAFXXXXXXXXXXXXXXAFTPTLLGDSGPXXXXXXX 510
             +QII+P+I++K+T GP PL+ + KA                +TP +    G        
Sbjct: 354  PLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIV 413

Query: 509  XXXXYVFHQTCLYCMFVAVMAFFAKVSDPTVGGTYMTLLNTVSNLGTNWPSTLALWAIDH 330
                Y  HQ  +Y M+V++MAF AKVSDP +GGTYMTLLNTVSNLG NWPST+ALW +D 
Sbjct: 414  VLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDP 473

Query: 329  LTYKSCSLSKLTDNKCSSTVEAELCKSEGGTCVTEIDGYYIETVICVILGFLWLQWGRPT 150
            LT K C     ++  C +    ELCK  GG+CVT +DGYY+E++ICV +GF W  +  P 
Sbjct: 474  LTVKEC--VGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPK 531

Query: 149  INRLQRLPPSAWQISR 102
              +LQ    S+W+  R
Sbjct: 532  FKKLQDEGSSSWKCKR 547


>AF534825-1|AAO15023.1|  166|Homo sapiens TREM-like transcript 3
           protein.
          Length = 166

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 19/74 (25%), Positives = 34/74 (45%)
 Frame = -1

Query: 404 MTLLNTVSNLGTNWPSTLALWAIDHLTYKSCSLSKLTDNKCSSTVEAELCKSEGGTCVTE 225
           +T+L  VS +    P+T   W +  L   +    +L +NK   + E+ L KS    C+  
Sbjct: 86  VTVLRDVSLVVFAAPTTSPTWTLTWLPTNTDGAIQLQENKLRDSTESALWKSSAPICLGS 145

Query: 224 IDGYYIETVICVIL 183
                + +V+C +L
Sbjct: 146 AGPKLLVSVLCGLL 159


>AF016694-1|AAB71687.1|  246|Homo sapiens small intestinal mucin
           MUC3 protein.
          Length = 246

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 637 AGPVVCLAKITGIMICTGTKGTA-SKAKSSRGTPASTSFKPDTASAAQKPSLAVNRTKAN 813
           + PVV   + T  +  T T+GT+ + +  S GTP  TS    T + A   + +++ T A+
Sbjct: 127 SSPVVTSTEGTSSL--TPTEGTSIATSTPSEGTPPLTSMPVSTTTVASSETNSLSTTPAD 184

Query: 814 LRTA 825
            RTA
Sbjct: 185 TRTA 188


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,809,544
Number of Sequences: 237096
Number of extensions: 3107889
Number of successful extensions: 6505
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6501
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)