Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10c18
(908 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058787-1|AAL14016.1| 525|Drosophila melanogaster SD08430p pro... 204 1e-52
AE014296-2800|AAN11741.1| 525|Drosophila melanogaster CG9706-PB... 204 2e-52
AE014296-2799|AAF49413.1| 525|Drosophila melanogaster CG9706-PA... 204 2e-52
AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece... 34 0.23
AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC... 34 0.23
BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p pro... 33 0.41
AY058544-1|AAL13773.1| 560|Drosophila melanogaster LD24478p pro... 33 0.41
AE014298-2788|AAF48903.1| 560|Drosophila melanogaster CG7332-PA... 33 0.41
BT016112-1|AAV36997.1| 2062|Drosophila melanogaster LD13852p pro... 33 0.54
AY052128-1|AAK93552.1| 732|Drosophila melanogaster SD07795p pro... 33 0.54
AJ007518-1|CAA07550.1| 2061|Drosophila melanogaster transcriptio... 33 0.54
AF024604-1|AAB82274.1| 1751|Drosophila melanogaster transcriptio... 33 0.54
AF024603-1|AAB82273.1| 1773|Drosophila melanogaster transcriptio... 33 0.54
AE013599-1527|AAM68625.1| 1751|Drosophila melanogaster CG8815-PD... 33 0.54
AE013599-1526|AAF58488.2| 1776|Drosophila melanogaster CG8815-PA... 33 0.54
AE013599-1525|AAM68624.1| 2062|Drosophila melanogaster CG8815-PC... 33 0.54
AE013599-1524|AAF58487.2| 2062|Drosophila melanogaster CG8815-PB... 33 0.54
AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein. 32 1.2
AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog... 32 1.2
AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-P... 32 1.2
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ... 31 2.2
>AY058787-1|AAL14016.1| 525|Drosophila melanogaster SD08430p protein.
Length = 525
Score = 204 bits (498), Expect = 1e-52
Identities = 101/255 (39%), Positives = 146/255 (57%)
Frame = -1
Query: 872 DIVSAYKQLYTIVKLPAVRKLALVLFTAKLGFCAADAVSGLKLVEAGVPREDXXXXXXXX 693
+I +YK L+ +V + V+ LA++L T K+ F A+DAV+ LKL++AGVP++
Sbjct: 267 NISESYKILWDMVCMRPVQILAVILLTVKVTFAASDAVTSLKLIDAGVPKDKLALLAIPL 326
Query: 692 XXVQIIMPVILAKHTTGPAPLSLWLKAFXXXXXXXXXXXXXXAFTPTLLGDSGPXXXXXX 513
+Q+I+P+ + ++T GP P+ ++LKA TP ++
Sbjct: 327 IPLQLILPLAVGRYTNGPRPMDVYLKAIPYRIIMATVATGLAYITPYIVRGGAVPAYYYV 386
Query: 512 XXXXXYVFHQTCLYCMFVAVMAFFAKVSDPTVGGTYMTLLNTVSNLGTNWPSTLALWAID 333
Y +Q LY MFVA MAFFAK+SDP VGGTYMT LNT+ NLG NWP+T+ LW +D
Sbjct: 387 LLITSYAIYQVFLYSMFVAAMAFFAKISDPAVGGTYMTFLNTLCNLGGNWPNTVVLWLVD 446
Query: 332 HLTYKSCSLSKLTDNKCSSTVEAELCKSEGGTCVTEIDGYYIETVICVILGFLWLQWGRP 153
LT+K CS + +N C E + C++ G C DGYY+E+ ICV+ G +WL R
Sbjct: 447 VLTWKQCSNN--AENTCQGKEEQQSCEASAGKCEITFDGYYLESGICVLYGIVWLLLVRK 504
Query: 152 TINRLQRLPPSAWQI 108
I LQ LP +W +
Sbjct: 505 WIVYLQDLPVRSWLV 519
>AE014296-2800|AAN11741.1| 525|Drosophila melanogaster CG9706-PB,
isoform B protein.
Length = 525
Score = 204 bits (497), Expect = 2e-52
Identities = 101/255 (39%), Positives = 146/255 (57%)
Frame = -1
Query: 872 DIVSAYKQLYTIVKLPAVRKLALVLFTAKLGFCAADAVSGLKLVEAGVPREDXXXXXXXX 693
+I +YK L+ +V + V+ LA++L T K+ F A+DAV+ LKL++AGVP++
Sbjct: 267 NIHESYKILWDMVCMRPVQILAVILLTVKVTFAASDAVTSLKLIDAGVPKDKLALLAIPL 326
Query: 692 XXVQIIMPVILAKHTTGPAPLSLWLKAFXXXXXXXXXXXXXXAFTPTLLGDSGPXXXXXX 513
+Q+I+P+ + ++T GP P+ ++LKA TP ++
Sbjct: 327 IPLQLILPLAVGRYTNGPRPMDVYLKAIPYRIIMATVATGLAYITPYIVRGGAVPAYYYV 386
Query: 512 XXXXXYVFHQTCLYCMFVAVMAFFAKVSDPTVGGTYMTLLNTVSNLGTNWPSTLALWAID 333
Y +Q LY MFVA MAFFAK+SDP VGGTYMT LNT+ NLG NWP+T+ LW +D
Sbjct: 387 LLITSYAIYQVFLYSMFVAAMAFFAKISDPAVGGTYMTFLNTLCNLGGNWPNTVVLWLVD 446
Query: 332 HLTYKSCSLSKLTDNKCSSTVEAELCKSEGGTCVTEIDGYYIETVICVILGFLWLQWGRP 153
LT+K CS + +N C E + C++ G C DGYY+E+ ICV+ G +WL R
Sbjct: 447 VLTWKQCSNN--AENTCQGKEEQQSCEASAGKCEITFDGYYLESGICVLYGIVWLLLVRK 504
Query: 152 TINRLQRLPPSAWQI 108
I LQ LP +W +
Sbjct: 505 WIVYLQDLPVRSWLV 519
>AE014296-2799|AAF49413.1| 525|Drosophila melanogaster CG9706-PA,
isoform A protein.
Length = 525
Score = 204 bits (497), Expect = 2e-52
Identities = 101/255 (39%), Positives = 146/255 (57%)
Frame = -1
Query: 872 DIVSAYKQLYTIVKLPAVRKLALVLFTAKLGFCAADAVSGLKLVEAGVPREDXXXXXXXX 693
+I +YK L+ +V + V+ LA++L T K+ F A+DAV+ LKL++AGVP++
Sbjct: 267 NIHESYKILWDMVCMRPVQILAVILLTVKVTFAASDAVTSLKLIDAGVPKDKLALLAIPL 326
Query: 692 XXVQIIMPVILAKHTTGPAPLSLWLKAFXXXXXXXXXXXXXXAFTPTLLGDSGPXXXXXX 513
+Q+I+P+ + ++T GP P+ ++LKA TP ++
Sbjct: 327 IPLQLILPLAVGRYTNGPRPMDVYLKAIPYRIIMATVATGLAYITPYIVRGGAVPAYYYV 386
Query: 512 XXXXXYVFHQTCLYCMFVAVMAFFAKVSDPTVGGTYMTLLNTVSNLGTNWPSTLALWAID 333
Y +Q LY MFVA MAFFAK+SDP VGGTYMT LNT+ NLG NWP+T+ LW +D
Sbjct: 387 LLITSYAIYQVFLYSMFVAAMAFFAKISDPAVGGTYMTFLNTLCNLGGNWPNTVVLWLVD 446
Query: 332 HLTYKSCSLSKLTDNKCSSTVEAELCKSEGGTCVTEIDGYYIETVICVILGFLWLQWGRP 153
LT+K CS + +N C E + C++ G C DGYY+E+ ICV+ G +WL R
Sbjct: 447 VLTWKQCSNN--AENTCQGKEEQQSCEASAGKCEITFDGYYLESGICVLYGIVWLLLVRK 504
Query: 152 TINRLQRLPPSAWQI 108
I LQ LP +W +
Sbjct: 505 WIVYLQDLPVRSWLV 519
>AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone
receptor 4 protein.
Length = 1518
Score = 34.3 bits (75), Expect = 0.23
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 631 SGAGPVVCLAKITGIMICTGTKGTASKAKSSRGTPASTSFKPDTASAAQKPSLAVNRTKA 810
SGAGP V + T + T +S + SS T +STS TA A+ + + + +
Sbjct: 128 SGAGPCVSTSSTTAAAATSSTSSLSSSSSSSSSTSSSTSSASPTAGASSTATCPASSSSS 187
Query: 811 NLRTAG 828
+ +G
Sbjct: 188 SGNGSG 193
>AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC
protein.
Length = 1518
Score = 34.3 bits (75), Expect = 0.23
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 631 SGAGPVVCLAKITGIMICTGTKGTASKAKSSRGTPASTSFKPDTASAAQKPSLAVNRTKA 810
SGAGP V + T + T +S + SS T +STS TA A+ + + + +
Sbjct: 128 SGAGPCVSTSSTTAAAATSSTSSLSSSSSSSSSTSSSTSSASPTAGASSTATCPASSSSS 187
Query: 811 NLRTAG 828
+ +G
Sbjct: 188 SGNGSG 193
>BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p protein.
Length = 1047
Score = 33.5 bits (73), Expect = 0.41
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +1
Query: 541 SPSSVGVKATRAAARGPTSS-LNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGT----A 705
+P+ KA +A P S G+ ++D + + + + TGT T A
Sbjct: 884 TPAPPQPKAASSAGSSPRSGEATGEEVTEKDGATAVAAAVVAGSRMAVTTGTSTTTTTTA 943
Query: 706 SKAKSSRGTPASTSFKPDTASAAQKPSLAVNRTKANL 816
S + SS G+ +STS ++S++ SL+V + +L
Sbjct: 944 SSSLSSSGSSSSTSGSGSSSSSSSTSSLSVPQPAPSL 980
>AY058544-1|AAL13773.1| 560|Drosophila melanogaster LD24478p
protein.
Length = 560
Score = 33.5 bits (73), Expect = 0.41
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +1
Query: 502 NMSMLR*EYEGPESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMI 681
N ++R + G +SPSSV K+ AAA T+S+ F + + +
Sbjct: 2 NEKIVREQRGGEDSPSSVSAKSATAAASASTASM---TFASAALESHKTTTITTASSSPR 58
Query: 682 CTGTKGTASKAKSSRGTPASTS 747
+G +AS + S PAS+S
Sbjct: 59 TSGASASASSSSRSASAPASSS 80
>AE014298-2788|AAF48903.1| 560|Drosophila melanogaster CG7332-PA
protein.
Length = 560
Score = 33.5 bits (73), Expect = 0.41
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +1
Query: 502 NMSMLR*EYEGPESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMI 681
N ++R + G +SPSSV K+ AAA T+S+ F + + +
Sbjct: 2 NEKIVREQRGGEDSPSSVSAKSATAAASASTASM---TFASAALESHKTTTITTASSSPR 58
Query: 682 CTGTKGTASKAKSSRGTPASTS 747
+G +AS + S PAS+S
Sbjct: 59 TSGASASASSSSRSASAPASSS 80
>BT016112-1|AAV36997.1| 2062|Drosophila melanogaster LD13852p protein.
Length = 2062
Score = 33.1 bits (72), Expect = 0.54
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +1
Query: 538 ESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGTASKAK 717
+SP +TR A P+ S + N S P + TG+ AS A
Sbjct: 1334 DSPLGRTESSTRNAKSTPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSAT 1393
Query: 718 SSRGTPASTSFKPDTASAAQKPSLAVNRT 804
+S TP + P T+SAA S A + T
Sbjct: 1394 ASSATPVDDA-TPSTSSAAAAASAASSST 1421
>AY052128-1|AAK93552.1| 732|Drosophila melanogaster SD07795p
protein.
Length = 732
Score = 33.1 bits (72), Expect = 0.54
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +1
Query: 538 ESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGTASKAK 717
+SP +TR A P+ S + N S P + TG+ AS A
Sbjct: 4 DSPLGRTESSTRNAKSTPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSAT 63
Query: 718 SSRGTPASTSFKPDTASAAQKPSLAVNRT 804
+S TP + P T+SAA S A + T
Sbjct: 64 ASSATPVDDA-TPSTSSAAAAASAASSST 91
>AJ007518-1|CAA07550.1| 2061|Drosophila melanogaster transcription
factor protein.
Length = 2061
Score = 33.1 bits (72), Expect = 0.54
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +1
Query: 538 ESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGTASKAK 717
+SP +TR A P+ S + N S P + TG+ AS A
Sbjct: 1334 DSPLGRTESSTRNAKSTPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSAT 1393
Query: 718 SSRGTPASTSFKPDTASAAQKPSLAVNRT 804
+S TP + P T+SAA S A + T
Sbjct: 1394 ASSATPVDDA-TPSTSSAAAAASAASSST 1421
>AF024604-1|AAB82274.1| 1751|Drosophila melanogaster transcriptional
co-repressor SIN3A protein.
Length = 1751
Score = 33.1 bits (72), Expect = 0.54
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +1
Query: 538 ESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGTASKAK 717
+SP +TR A P+ S + N S P + TG+ AS A
Sbjct: 1331 DSPLGRTESSTRNAKSTPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSAT 1390
Query: 718 SSRGTPASTSFKPDTASAAQKPSLAVNRT 804
+S TP + P T+SAA S A + T
Sbjct: 1391 ASSATPVDDA-TPSTSSAAAAASAASSST 1418
>AF024603-1|AAB82273.1| 1773|Drosophila melanogaster transcriptional
co-repressor SIN3A protein.
Length = 1773
Score = 33.1 bits (72), Expect = 0.54
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +1
Query: 538 ESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGTASKAK 717
+SP +TR A P+ S + N S P + TG+ AS A
Sbjct: 1331 DSPLGRTESSTRNAKSTPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSAT 1390
Query: 718 SSRGTPASTSFKPDTASAAQKPSLAVNRT 804
+S TP + P T+SAA S A + T
Sbjct: 1391 ASSATPVDDA-TPSTSSAAAAASAASSST 1418
>AE013599-1527|AAM68625.1| 1751|Drosophila melanogaster CG8815-PD,
isoform D protein.
Length = 1751
Score = 33.1 bits (72), Expect = 0.54
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +1
Query: 538 ESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGTASKAK 717
+SP +TR A P+ S + N S P + TG+ AS A
Sbjct: 1334 DSPLGRTESSTRNAKSTPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSAT 1393
Query: 718 SSRGTPASTSFKPDTASAAQKPSLAVNRT 804
+S TP + P T+SAA S A + T
Sbjct: 1394 ASSATPVDDA-TPSTSSAAAAASAASSST 1421
>AE013599-1526|AAF58488.2| 1776|Drosophila melanogaster CG8815-PA,
isoform A protein.
Length = 1776
Score = 33.1 bits (72), Expect = 0.54
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +1
Query: 538 ESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGTASKAK 717
+SP +TR A P+ S + N S P + TG+ AS A
Sbjct: 1334 DSPLGRTESSTRNAKSTPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSAT 1393
Query: 718 SSRGTPASTSFKPDTASAAQKPSLAVNRT 804
+S TP + P T+SAA S A + T
Sbjct: 1394 ASSATPVDDA-TPSTSSAAAAASAASSST 1421
>AE013599-1525|AAM68624.1| 2062|Drosophila melanogaster CG8815-PC,
isoform C protein.
Length = 2062
Score = 33.1 bits (72), Expect = 0.54
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +1
Query: 538 ESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGTASKAK 717
+SP +TR A P+ S + N S P + TG+ AS A
Sbjct: 1334 DSPLGRTESSTRNAKSTPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSAT 1393
Query: 718 SSRGTPASTSFKPDTASAAQKPSLAVNRT 804
+S TP + P T+SAA S A + T
Sbjct: 1394 ASSATPVDDA-TPSTSSAAAAASAASSST 1421
>AE013599-1524|AAF58487.2| 2062|Drosophila melanogaster CG8815-PB,
isoform B protein.
Length = 2062
Score = 33.1 bits (72), Expect = 0.54
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +1
Query: 538 ESPSSVGVKATRAAARGPTSSLNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGTASKAK 717
+SP +TR A P+ S + N S P + TG+ AS A
Sbjct: 1334 DSPLGRTESSTRNAKSTPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSAT 1393
Query: 718 SSRGTPASTSFKPDTASAAQKPSLAVNRT 804
+S TP + P T+SAA S A + T
Sbjct: 1394 ASSATPVDDA-TPSTSSAAAAASAASSST 1421
>AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.
Length = 1047
Score = 31.9 bits (69), Expect = 1.2
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Frame = +1
Query: 541 SPSSVGVKATRAAARGPTSS-LNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGT----A 705
+P+ K +A P S G+ ++D + + + + TGT T A
Sbjct: 884 TPAPPQQKTASSAGSSPRSGEATGEEVTEKDGATAVAAAVVAGSRMAVTTGTSTTTTTTA 943
Query: 706 SKAKSSRGTPASTSFKPDTASAAQKPSLAVNRTKANL 816
S + SS G+ +STS ++S++ SL+V + +L
Sbjct: 944 SSSLSSSGSSSSTSGSGSSSSSSSTSSLSVPQPAPSL 980
>AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog
protein.
Length = 1061
Score = 31.9 bits (69), Expect = 1.2
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Frame = +1
Query: 541 SPSSVGVKATRAAARGPTSS-LNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGT----A 705
+P+ K +A P S G+ ++D + + + + TGT T A
Sbjct: 884 TPAPPQQKTASSAGSSPRSGEATGEEVTEKDGATAVAAAVVAGSRMAVTTGTSTTTTTTA 943
Query: 706 SKAKSSRGTPASTSFKPDTASAAQKPSLAVNRTKANL 816
S + SS G+ +STS ++S++ SL+V + +L
Sbjct: 944 SSSLSSSGSSSSTSGSGSSSSSSSTSSLSVPQPAPSL 980
>AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-PA
protein.
Length = 1047
Score = 31.9 bits (69), Expect = 1.2
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Frame = +1
Query: 541 SPSSVGVKATRAAARGPTSS-LNGKAFNQRDSGAGPVVCLAKITGIMICTGTKGT----A 705
+P+ K +A P S G+ ++D + + + + TGT T A
Sbjct: 884 TPAPPQQKTASSAGSSPRSGEATGEEVTEKDGATAVAAAVVAGSRMAVTTGTSTTTTTTA 943
Query: 706 SKAKSSRGTPASTSFKPDTASAAQKPSLAVNRTKANL 816
S + SS G+ +STS ++S++ SL+V + +L
Sbjct: 944 SSSLSSSGSSSSTSGSGSSSSSSSTSSLSVPQPAPSL 980
>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
protein.
Length = 1464
Score = 31.1 bits (67), Expect = 2.2
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 631 SGAGPVVCLAKITGIMICTGTKGTASKAKSSRGTPASTSFKPDTASAAQKPSLAVNRTKA 810
SGAGP V + + T +S + SS T +STS TA A+ + + + +
Sbjct: 128 SGAGPCVSTSSTRAAARTSSTSSLSSSSSSSSSTSSSTSSASPTAGASSTATCPASSSSS 187
Query: 811 NLRTAG 828
+ +G
Sbjct: 188 SGNGSG 193
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,445,357
Number of Sequences: 53049
Number of extensions: 940288
Number of successful extensions: 3210
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3204
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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