Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10c14
(875 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 26 1.7
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 26 1.7
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 26 1.7
AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 26 1.7
DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormo... 25 4.0
AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled ... 25 4.0
EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton anti... 24 5.3
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 24 5.3
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 9.2
AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding pr... 23 9.2
AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding pr... 23 9.2
AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding pr... 23 9.2
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 25.8 bits (54), Expect = 1.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -1
Query: 422 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 294
FDD + + L++ EDS D TLI + L D + ++ S + DGD+
Sbjct: 334 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 377
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 25.8 bits (54), Expect = 1.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -1
Query: 422 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 294
FDD + + L++ EDS D TLI + L D + ++ S + DGD+
Sbjct: 104 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 147
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 25.8 bits (54), Expect = 1.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -1
Query: 422 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 294
FDD + + L++ EDS D TLI + L D + ++ S + DGD+
Sbjct: 110 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 153
>AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 25.8 bits (54), Expect = 1.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -1
Query: 422 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 294
FDD + + L++ EDS D TLI + L D + ++ S + DGD+
Sbjct: 104 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 147
>DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormone
receptor protein.
Length = 354
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -2
Query: 577 IHRKHTKMLLKSARRK-CSPH 518
+ +KHTK LLK+ K C H
Sbjct: 329 VRKKHTKKLLKTTHEKSCGSH 349
>AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled
receptor protein.
Length = 354
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -2
Query: 577 IHRKHTKMLLKSARRK-CSPH 518
+ +KHTK LLK+ K C H
Sbjct: 329 VRKKHTKKLLKTTHEKSCGSH 349
>EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton
antiporter protein.
Length = 647
Score = 24.2 bits (50), Expect = 5.3
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 380 SYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGDN*YLAALTPAHAF 237
SY+ I+ ++ + LW + GD A GG L LT A F
Sbjct: 145 SYRQFARILSIILIGVLLWITAFVIIGDTAAPGGQLFQLVVLTVAANF 192
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 24.2 bits (50), Expect = 5.3
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = -1
Query: 833 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 660
W+V+ ++ + K + + +V K C V L+D LI K NP+ V
Sbjct: 274 WKVMKDVKDFIKLLLHKAFIVENQPPQVMKMNTRFCASVRLLIDNALIMKIGNPKVTV 331
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.4 bits (48), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 452 LANLISHNKRLRNLTPDPALWGVWA 526
LAN + N+ R T + ++GVWA
Sbjct: 16 LANEFNPNRGRRRPTKNQQIYGVWA 40
>AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding
protein AgamOBP30 protein.
Length = 289
Score = 23.4 bits (48), Expect = 9.2
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -2
Query: 169 EADASRRL*KC*KSFAADLPVPSKIKCCVIFDGFVFLYLHW 47
+ D RR +C S D P P C ++ F Y H+
Sbjct: 118 DCDYERRTYRCLHSQRLDRPAPHDEACERAYESFRCYYEHY 158
>AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding
protein OBPjj83c protein.
Length = 273
Score = 23.4 bits (48), Expect = 9.2
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -2
Query: 169 EADASRRL*KC*KSFAADLPVPSKIKCCVIFDGFVFLYLHW 47
+ D RR +C S D P P C ++ F Y H+
Sbjct: 102 DCDYERRTYRCLHSQRLDRPAPHDEACERAYESFRCYYEHY 142
>AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding
protein 1 protein.
Length = 289
Score = 23.4 bits (48), Expect = 9.2
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -2
Query: 169 EADASRRL*KC*KSFAADLPVPSKIKCCVIFDGFVFLYLHW 47
+ D RR +C S D P P C ++ F Y H+
Sbjct: 118 DCDYERRTYRCLHSQRLDRPAPHDEACERAYESFRCYYEHY 158
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 858,028
Number of Sequences: 2352
Number of extensions: 16904
Number of successful extensions: 84
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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