Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10c09
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   3.9  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    23   3.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.9  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/48 (20%), Positives = 25/48 (52%)
 Frame = +3

Query: 96  FARLLLYTLFAATHFTVFLPEQRARRIRLVNRQREHCRDRVRKH*LVH 239
           + R+++ T     +    + E+R + I L+ +Q E    ++++  L+H
Sbjct: 38  YPRIVVSTFNIVFYMYTLILEERFKLINLIIKQEEFFSPKIKRMVLLH 85


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 28  FTDQLTILVFLWLCGDCIVTIFISRVYYCIRYSLLLTLRYFY 153
           FT  L  L  ++      +   I  ++YC+   +LL + YFY
Sbjct: 202 FTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLI-ILLCIYYFY 242


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +3

Query: 537 FSSLLFATRSVRFHYGFEFDLSPRRV*NILAMELGVERSPPNXHRLIVKNEHLTNNSFMG 716
           F++ L   + +R H G   DL+P +   I A E+    SP     +     H + N F+G
Sbjct: 204 FTNALVLQQHIRLHTGEPTDLTPEQ---IQAAEVKDFPSPGGFPSI-----HNSINPFLG 255

Query: 717 QHF 725
           Q F
Sbjct: 256 QGF 258


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 621 YFRPAAVINQTRNRNESERIASRREGRKKYH 529
           Y RPA+     + R    ++  R+E R KY+
Sbjct: 66  YLRPASGFQSLQFRLLENKLGVRQENRVKYN 96


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 621 YFRPAAVINQTRNRNESERIASRREGRKKYH 529
           Y RPA+     + R    ++  R+E R KY+
Sbjct: 126 YLRPASGFQSLQFRLLENKLGVRQENRVKYN 156


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 621 YFRPAAVINQTRNRNESERIASRREGRKKYH 529
           Y RPA+     + R    ++  R+E R KY+
Sbjct: 126 YLRPASGFQSLQFRLLENKLGVRQENRVKYN 156


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 46   ILVFLWLCGDCIVT 87
            IL F W C D ++T
Sbjct: 1036 ILAFSWACNDAVMT 1049


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +1

Query: 28  FTDQLTILVFLWLCGDCIVTIFISRVYYCIRYS 126
           F     I+  L++C  C  T+  SR++  + ++
Sbjct: 274 FWSAFFIVNVLYICNQCYNTVEESRIFGLVTFT 306


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,810
Number of Sequences: 336
Number of extensions: 2571
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)