Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10c06
(269 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ438610-6|CAD27478.1| 226|Anopheles gambiae hypothetical prote... 24 0.86
DQ370046-1|ABD18607.1| 125|Anopheles gambiae putative secreted ... 23 1.5
CR954256-8|CAJ14149.1| 247|Anopheles gambiae putative signal pe... 22 3.5
AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14... 22 4.6
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 21 6.1
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 21 6.1
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 21 8.0
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 21 8.0
DQ518577-1|ABF66619.1| 318|Anopheles gambiae putative secreted ... 21 8.0
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 21 8.0
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 21 8.0
>AJ438610-6|CAD27478.1| 226|Anopheles gambiae hypothetical protein
protein.
Length = 226
Score = 24.2 bits (50), Expect = 0.86
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 194 CPPVCSPPDCRPICGPAS 141
C CSP C P C P S
Sbjct: 150 CLSKCSPTKCVPFCRPFS 167
Score = 21.0 bits (42), Expect = 8.0
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -1
Query: 194 CPPVCSPPDCRPICGPASPLLCQS 123
C P P CRP G + L +S
Sbjct: 154 CSPTKCVPFCRPFSGQTALLTPES 177
>DQ370046-1|ABD18607.1| 125|Anopheles gambiae putative secreted
polypeptide protein.
Length = 125
Score = 23.4 bits (48), Expect = 1.5
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = -1
Query: 194 CPPV--CSPPDCRPICGPASPLLCQSSV-PPTQRCY 96
C P C P + CGP L C +V RCY
Sbjct: 49 CVPTKECPPDEVFKCCGPCYQLNCYGTVLDCAGRCY 84
>CR954256-8|CAJ14149.1| 247|Anopheles gambiae putative signal
peptidase protein.
Length = 247
Score = 22.2 bits (45), Expect = 3.5
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -1
Query: 110 TQRCYPVNPCINIYSCYTQIM 48
T+ + +NP N Y+ YT ++
Sbjct: 94 TRASFNLNPLSNTYTIYTSVL 114
>AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14A
protein.
Length = 365
Score = 21.8 bits (44), Expect = 4.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 197 YCPPVCSPPDCRPICGPASPLLCQSSV 117
+ PVC PPD P P SP L ++V
Sbjct: 238 FVSPVCLPPDDFP---PTSPGLNVTAV 261
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 21.4 bits (43), Expect = 6.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 143 SPLLCQSSVPPTQ 105
SPL C+ SVP Q
Sbjct: 804 SPLYCEGSVPTLQ 816
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 21.4 bits (43), Expect = 6.1
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -2
Query: 64 VTLKLCNAMDDFYSE 20
V L+LCN + D++++
Sbjct: 596 VPLQLCNILQDYFTD 610
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 21.0 bits (42), Expect = 8.0
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 164 RPICGPASPLLCQSSVPPTQRCYPVNPCINIYSCYTQ 54
RP SP LC S+ + P++P C TQ
Sbjct: 227 RPYDISKSPRLCSSNGSSSATPLPLHPYHTDSDCSTQ 263
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 21.0 bits (42), Expect = 8.0
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 164 RPICGPASPLLCQSSVPPTQRCYPVNPCINIYSCYTQ 54
RP SP LC S+ + P++P C TQ
Sbjct: 227 RPYDISKSPRLCSSNGSSSATPLPLHPYHTDSDCSTQ 263
>DQ518577-1|ABF66619.1| 318|Anopheles gambiae putative secreted
carbonic anhydrase protein.
Length = 318
Score = 21.0 bits (42), Expect = 8.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 129 PEQRATNTTVLSCKSLHQHIQLLHSN 52
P+QR + SC HQ +HS+
Sbjct: 40 PDQRRWSKAHQSCAGAHQSPIAIHSH 65
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 21.0 bits (42), Expect = 8.0
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 83 KDLQDSTVVLVARCSGKGAEMQVHRSDDNPEVNRLVDNNPFFTFLI 220
K+L D V G M + + +D +NRL+D+ T L+
Sbjct: 606 KELYDVRSGCVQEQDGTHLLMNLIKVNDPVVMNRLIDSAAIDTILV 651
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 21.0 bits (42), Expect = 8.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 149 PASPLLCQSSVPPTQRCYPV 90
PASPL+ ++VP Y +
Sbjct: 1262 PASPLVPDTAVPDPHSLYAI 1281
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,285
Number of Sequences: 2352
Number of extensions: 6400
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15293985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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