Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10c02
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 38 0.009
04_01_0290 + 3843610-3843712,3844088-3846003 36 0.029
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 36 0.038
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 36 0.050
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 35 0.088
01_05_0282 - 20347915-20348874,20348968-20349012,20349568-203498... 33 0.20
06_02_0139 + 12247051-12247155,12247250-12247327,12247412-122475... 33 0.27
04_01_0283 + 3768732-3768792,3769235-3769876,3769907-3770076,377... 33 0.36
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 32 0.47
05_06_0193 + 26279105-26279229,26279725-26279833,26280362-262804... 32 0.47
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 32 0.62
08_02_0747 - 20728073-20728081,20728167-20728353,20728810-207289... 31 1.1
04_03_0374 - 15078721-15079350 31 1.1
04_03_0317 + 14292003-14292632 31 1.1
03_01_0291 - 2250349-2250966,2251062-2251444,2251604-2251981,225... 31 1.1
02_04_0268 + 21435231-21435240,21435330-21435558,21435778-214358... 31 1.1
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13... 31 1.4
08_02_1240 + 25504789-25504794,25505421-25505555,25505854-255059... 30 1.9
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 30 1.9
03_02_0715 + 10621789-10623243,10624074-10625018 30 2.5
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 29 3.3
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26... 29 3.3
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 29 3.3
01_01_1076 - 8474869-8474934,8475028-8475128,8475248-8475405,847... 29 3.3
10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,381... 29 4.4
07_03_0607 + 19916946-19917479,19917543-19918010,19918092-199184... 29 4.4
04_04_0015 + 22164889-22165000,22165135-22165167,22165992-221662... 29 4.4
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 29 4.4
04_03_0318 + 14296001-14296630 29 4.4
03_05_1150 - 30758981-30759778,30759970-30760729,30760823-307609... 29 4.4
01_01_0595 - 4430738-4430785,4430904-4432679 29 4.4
08_02_1490 + 27495155-27495334,27495437-27495746,27495865-274959... 29 5.8
06_03_0214 + 18067945-18068463,18068940-18069839,18069918-18070652 29 5.8
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 28 7.6
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 28 7.6
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 37.9 bits (84), Expect = 0.009
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Frame = -3
Query: 552 HTKCMNETAKSIC-----EGGDRGYQWKCAVCQKSATKLSNEVQNSKEINIENTLNLLSE 388
H+KC+ E K+ E + K AV QK + L++E+Q E + +N N L +
Sbjct: 693 HSKCLTELEKAQSSVKELESTNGDLNDKIAVLQKEGSSLASELQQL-EASFKNLGNDLEQ 751
Query: 387 KFELVNKIQLPKLHNELAHVKLVTE--RIDKQNEQILHEIDEIKTKL 253
KFE ++ +Q ELA+ L E + +Q + + E+ KL
Sbjct: 752 KFEQISVMQKNNEELELANSNLQNELAMVQEQKNEAVASTVELGNKL 798
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 36.3 bits (80), Expect = 0.029
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = -3
Query: 537 NETAKSICEGGDRGYQWKCAVCQKSATKLSNEVQNSKEINIENTLNLLSEKFELVNKIQL 358
+E AK + E D + + K N+ S+ + E LN+ + E + K++L
Sbjct: 146 DEKAKMMMESVDLKSRLEEIQGNMDMIKSENDKLRSEALVAEQKLNICEAEIERL-KMEL 204
Query: 357 PKLH--NELAHVKLVTERIDKQNEQILHEIDEIKTKLNGIRTVK 232
L NE A + D QNE+I E++++KTKL I+T K
Sbjct: 205 GALTEANEAA-----AKAFDTQNEEITKELEDLKTKLEEIKTNK 243
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 35.9 bits (79), Expect = 0.038
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 624 VCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSA 460
VC C + C C+S+YHT C+N I EG W C CQ A
Sbjct: 1080 VCKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEG-----NWYCPSCQTKA 1129
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 35.5 bits (78), Expect = 0.050
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 12/83 (14%)
Frame = -3
Query: 399 LLSEKFEL---VNKI--QLPKLHNELAHVKLVTERIDKQNE------QILHE-IDEIKTK 256
+LS++ EL +NKI +PK +ELAH++ +I K+ + Q+L + +DEI TK
Sbjct: 471 ILSQERELRAKLNKILHSIPKHEDELAHLREEHNKIAKERQTSGVKYQMLKQRLDEIDTK 530
Query: 255 LNGIRTVKHNKHRYRNAHFEDRV 187
L ++ KH R+A F + V
Sbjct: 531 LRELKADKHESE--RDARFSETV 551
>07_03_1575 - 27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 34.7 bits (76), Expect = 0.088
Identities = 41/174 (23%), Positives = 76/174 (43%)
Frame = -3
Query: 624 VCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSN 445
+C +C + ++ ++++ C +CE+ +H K + G Y + C C S L+
Sbjct: 1136 LCGHCDKEVKISDAVNCQYCEALFHKKHF-----KVPRGATDAY-YVCNKC-LSEKVLNV 1188
Query: 444 EVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEIDEI 265
+ K ++ +N+L ++K L KI K + + K+ + ++E
Sbjct: 1189 KSPQKKVVSKKNSLKKKTKKQSL--KIVTRSKQIVAKSKKKMGKNKGKRGRPRKYPLNES 1246
Query: 264 KTKLNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNTEKSVRYRTRRRS 103
K KL +R VK + +N + R+S RL M N+ S R RRR+
Sbjct: 1247 KNKLPELR-VKEPANVPKNEPAK-RISKRLYSK---YMKGNSNISERSAKRRRT 1295
>01_05_0282 -
20347915-20348874,20348968-20349012,20349568-20349816,
20350393-20350581,20351051-20351155,20351165-20351488,
20351493-20351555
Length = 644
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = -3
Query: 624 VCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVC--QKSATKL 451
+C CH +I C C+ YH C+ SI +G +W C+ C +++ +
Sbjct: 546 LCRVCHSDRDDDLTILCDGCDEAYHLYCITPRRTSIPKG-----KWYCSSCAIERAKEGM 600
Query: 450 SNEVQNSKEINIENTLNLLSEKFELVNKI 364
+ + +++ ++ L ++E+V+ I
Sbjct: 601 ARHEKRMLKLHRKDDPGLQGMRYEMVDMI 629
>06_02_0139 +
12247051-12247155,12247250-12247327,12247412-12247519,
12247882-12247944,12248024-12248185,12248424-12248624,
12248663-12248725,12248915-12249244,12249870-12250034,
12250110-12251078
Length = 747
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -3
Query: 387 KFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEIDEIKTK-LNGIR 241
KF+L N + + L+ L HV ++ E +D ++ ILH +DE + LNG R
Sbjct: 150 KFKL-NGVSIDLLYANLTHV-VIPEDLDLSHDSILHNVDEQTVRSLNGCR 197
>04_01_0283 +
3768732-3768792,3769235-3769876,3769907-3770076,
3770134-3770511,3770602-3770991
Length = 546
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = -3
Query: 447 NEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEIDE 268
N+ S+ + E LN+ + E + K++L L + + D QNE+I ++++
Sbjct: 160 NDKLRSEALIAEQKLNICEAEIERL-KMELGGLTEAK---EAAAKAFDTQNEEITKDLED 215
Query: 267 IKTKLNGIRTVK 232
+KTKL I+T K
Sbjct: 216 LKTKLEEIKTNK 227
>06_03_1511 -
30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/71 (23%), Positives = 27/71 (38%)
Frame = -3
Query: 624 VCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSN 445
VC C+ L + C C+ +H C++ +S+ G W C+ C S
Sbjct: 258 VCEQCNSGLHGEVMLLCDRCDKGWHLYCLSPPLESVPPG-----NWYCSECMNSDRNCFG 312
Query: 444 EVQNSKEINIE 412
V K +E
Sbjct: 313 FVHRRKTCQVE 323
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -3
Query: 633 QRMVCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVC--QKSA 460
Q+ +CA C + + +C C+++YH+ C+ S +W C C +S
Sbjct: 1414 QKGLCAICSCDVGDHITPRCMICQARYHSSCVEPLPAST----QVTREWTCPFCFHLESG 1469
Query: 459 TKLSNEVQ 436
L N +Q
Sbjct: 1470 DPLQNRLQ 1477
>05_06_0193 +
26279105-26279229,26279725-26279833,26280362-26280437,
26280527-26281472,26281564-26281615,26281945-26282067,
26282144-26282219,26282308-26282492,26282615-26282806,
26282895-26282963,26283745-26283954,26285602-26285751,
26286283-26286344,26286428-26286503,26286575-26286745
Length = 873
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -3
Query: 240 TVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNTEKSVRYRTRRRSYLLHNMLRLLNSRN 61
+V +K R E+ +SN L D +QM+ NTEK++ + R L ++ +L +
Sbjct: 69 SVSSDKERQEKYGDENGISN-LQLEDLIQMIQNTEKNIMLLNQARLQALEHVETVLKEKE 127
Query: 60 KVRRR 46
++R+
Sbjct: 128 DLQRK 132
>02_01_0369 +
2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 31.9 bits (69), Expect = 0.62
Identities = 19/91 (20%), Positives = 44/91 (48%)
Frame = -3
Query: 405 LNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEIDEIKTKLNGIRTVKHN 226
L L ++ +N P+ NE+ +++++ E +K + E+ + + +L+ + TVK
Sbjct: 387 LQLQMDESADLNTDDTPQSSNEVINLQVLLEETEKSKLAVCEELQQCRHELSDMNTVK-E 445
Query: 225 KHRYRNAHFEDRVSNRLDDNDHLQMVNNTEK 133
+ A DR++ + +HL+ + K
Sbjct: 446 ELELTVASLTDRINTSNNKCEHLEFELQSSK 476
>08_02_0747 -
20728073-20728081,20728167-20728353,20728810-20728913,
20729008-20729139,20729583-20729810,20730263-20730358,
20730440-20730511,20730588-20730760,20730947-20731000,
20731086-20731134,20731228-20731326,20731420-20731511,
20731607-20731832,20731927-20732100,20732186-20732809,
20732890-20733033,20733108-20733218,20733516-20733650,
20733963-20733989
Length = 911
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = -3
Query: 471 QKSATKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKL--VTERIDKQ 298
QK+ S+ NSK + ++ L + +E+F VNK + E+ H+ + + +++K
Sbjct: 501 QKNNNFTSSPKGNSKTVLDDDKLPIPNEEFNPVNKSTILNSSEEIKHINIDEIMTKLNKT 560
Query: 297 NEQILHEIDEIKTKLNGIRTVKHNK 223
++ DE T+ N T ++N+
Sbjct: 561 GHVPINPPDE--TEKNSALTARNNQ 583
>04_03_0374 - 15078721-15079350
Length = 209
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Frame = -3
Query: 444 EVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEI--- 274
EVQ +K + + E F+ + ++ K +L + + E++DK E+ LH++
Sbjct: 47 EVQATKVWPLVWKATRVLEHFKAMPQLDRYKKMTDLEDI--LNEQVDKLKEE-LHKVGRD 103
Query: 273 -DEIKTKLNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNTEKSVR 124
DE TKL + + ++ E S L N HL++VN+ K +R
Sbjct: 104 ADESDTKLILVEALNGHRPSLEGLTIEQITSLGLMANAHLKIVNDRLKKLR 154
>04_03_0317 + 14292003-14292632
Length = 209
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = -3
Query: 324 LVTERIDKQNEQILHEI----DEIKTKLNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHL 157
++ E++DK EQ LH++ DE +TKL I + ++ E S N HL
Sbjct: 85 ILNEQVDKLKEQ-LHKVGRDADESETKLLLIEAINGHRPSLEGLTIEQITSLGWMANAHL 143
Query: 156 QMVNNTEKSVR 124
++VN+ K +R
Sbjct: 144 KIVNDRLKKLR 154
>03_01_0291 -
2250349-2250966,2251062-2251444,2251604-2251981,
2252147-2252294,2252382-2252906,2253990-2254112,
2254151-2254205,2254510-2254640
Length = 786
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -3
Query: 258 KLNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNTEKSVR-YRTRRRSYLLHNML 82
K NG++ N H+Y N H V ++ QM +N ++ V + R+++ ++ +L
Sbjct: 69 KKNGLQVCSVNVHQYGNTHRAQEVQYNSNNFLGFQMESNRQQYVHCFLLRQKAVVILLVL 128
Query: 81 RLLNSRNKVRRR 46
L+ RNK +R
Sbjct: 129 ILVWLRNKNGKR 140
>02_04_0268 +
21435231-21435240,21435330-21435558,21435778-21435898,
21435992-21436264
Length = 210
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = -3
Query: 633 QRMVCAYCHRTLRHAESIKCC-FCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSAT 457
Q +C C T + E CC CE +H KC+ T + Q+KC C +
Sbjct: 153 QAYMCGACGETYANGEFWICCDVCEKWFHGKCVRITPAK----AEHIKQYKCPGCSSKRS 208
Query: 456 K 454
+
Sbjct: 209 R 209
>06_01_0007 +
130582-131544,132187-132264,132615-132732,133228-133271,
133389-133448,133536-133588,133671-133837,133963-134167,
134989-135046,135225-135281,135363-135608,135938-136002,
136090-136158,136238-136331,136467-136607,137159-137304,
137452-138110,138222-138335,138406-138560
Length = 1163
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/69 (21%), Positives = 31/69 (44%)
Frame = -3
Query: 582 IKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSNEVQNSKEINIENTL 403
I C CE +YH C+ + + G + C C + + L + + I E+ +
Sbjct: 578 ILCDQCEKEYHVGCLRSQWQVDLKELPEGEWFCCNSCSEIRSSLDKIISDGALILAESDI 637
Query: 402 NLLSEKFEL 376
+++ +K E+
Sbjct: 638 DIIRKKHEM 646
>08_02_1240 +
25504789-25504794,25505421-25505555,25505854-25505964,
25506091-25506183,25506264-25506884,25506970-25507143,
25507239-25507464,25507560-25507651,25507744-25507842,
25507936-25507984,25508071-25508124,25508312-25508484,
25508561-25508632,25508713-25508808,25509032-25509048,
25509704-25509875,25509973-25510071,25510381-25510484,
25510940-25511126,25511212-25511220
Length = 862
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = -3
Query: 471 QKSATKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKL--VTERIDKQ 298
+K+ S+ NSK I ++ L + +E+F VNK + E+ H+ + + +++K
Sbjct: 476 KKNNNFTSSPKGNSKTILDDDKLPIPNEEFNPVNKSTILNSSEEIKHINIDEIMTKLNKT 535
Query: 297 NEQILHEIDEIKTKLNGIRTVKHNKHRYRNAHFEDRVSNRLDDND 163
++ DE T+ N T ++N+ F D+ S ++ D+D
Sbjct: 536 GHVPINPPDE--TEKNSALTARNNQ------VFHDQPSFKIWDSD 572
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -3
Query: 645 LSNFQRMVCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQ 469
L ++ +VC C+R + C C+S HT C+ + + EG W C C+
Sbjct: 454 LDPYENVVCIECNRGGDDNLMLLCDICDSSAHTYCVG-LGRQVPEG-----NWYCGGCR 506
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -3
Query: 645 LSNFQRMVCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQ 469
L ++ +VC C++ + + C C+S HT C+ + + EG W C C+
Sbjct: 498 LDPYENVVCIECNQGGDDSLMLLCDICDSSAHTYCVG-LGREVPEG-----NWYCGGCR 550
>10_08_0829 -
20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 29.5 bits (63), Expect = 3.3
Identities = 29/126 (23%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Frame = -3
Query: 441 VQNSKEINIENTLN--LLSEKFELVNK---IQLPKLHNELAHVKLVTERIDKQNEQI--- 286
V NS+E++ E L+ L S+ L K ++L KL + + + E++ K E++
Sbjct: 575 VPNSEEVSSEGDLSDRLTSKVKYLETKCADLEL-KLISFRSESSELEEKLQKSQEELKDR 633
Query: 285 LHEIDEIKTKLNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNTEKSVRYRTRRR 106
+ E+ +++ KL+G ++ + +A S +LD+ND+ ++ +V + +
Sbjct: 634 ILELSDLRDKLSGFHALEMEEGDTDSAKSYKLKSEKLDENDNKTELDALRSTVLLKEQEI 693
Query: 105 SYLLHN 88
L H+
Sbjct: 694 ESLQHS 699
>08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-269805,
269895-270098,271532-271664,271810-271881,273106-273168,
273252-275034,275169-275217
Length = 1229
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -3
Query: 624 VCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQ 469
+C C + + + C C+ YH CM +I +G +W C C+
Sbjct: 1142 LCRGCFQDKDDDQIVMCDGCDEGYHIYCMRPARNTIPKG-----KWYCTFCK 1188
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = -3
Query: 624 VCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSAT 457
VC C E ++C C + +HT C++ SI D + W C C T
Sbjct: 17 VCMLCKVLTTEVEQLRCSTCATPWHTPCLS----SIPPLTDVAH-WVCPDCSGDVT 67
>01_01_1076 -
8474869-8474934,8475028-8475128,8475248-8475405,
8475554-8475628,8476528-8476667,8477284-8477377,
8478063-8478271
Length = 280
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = -3
Query: 450 SNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEID 271
S+EV N + E LL + + +L L NE+ + V E D+ ++I H+I
Sbjct: 151 SSEVNNGADKLAEQRTALLESRRQ-----ELVFLDNEIVFNEAVIEERDQGIQEIQHQIT 205
Query: 270 EIKTKLNGIRTVKHNKHRY---RNAHFEDRVSNRLDDNDHLQMVNNTEKS 130
E+ + + H++ + + H E+ V L T+KS
Sbjct: 206 EVNEIFKDLAVLVHDQGQMIDDIDTHIENAVIATTQAKGQLSKAAKTQKS 255
>10_01_0345 -
3811057-3811236,3811342-3811615,3811732-3812289,
3812602-3812747,3812930-3813097,3813896-3814003,
3814859-3815029,3816557-3816949,3817522-3817617,
3817715-3817774,3818600-3818744,3819296-3819520,
3820106-3820254
Length = 890
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 648 LLSNFQRMVCAYCHRTLRHAESIKCCFC 565
++ FQ VC+ T ++ SI CCFC
Sbjct: 408 IVDKFQVYVCSQLFTTHQYTFSIACCFC 435
>07_03_0607 +
19916946-19917479,19917543-19918010,19918092-19918479,
19919025-19919076,19919294-19919333
Length = 493
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/88 (21%), Positives = 36/88 (40%)
Frame = -3
Query: 657 VHSLLSNFQRMVCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCA 478
VHS S QR++ +RT+ E+I CCF +T ++C G G +
Sbjct: 260 VHSN-SALQRLLIGMPNRTILVIENIDCCFSARSREDGKDRKTPPAVCYGDGGGDYDEDE 318
Query: 477 VCQKSATKLSNEVQNSKEINIENTLNLL 394
++ ++ + + + LN +
Sbjct: 319 YYEEDEGNWRDDFSEKQSLTLSGLLNFI 346
>04_04_0015 +
22164889-22165000,22165135-22165167,22165992-22166220,
22166709-22166826,22166910-22167188
Length = 256
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = -3
Query: 624 VCAYCHRTLRHAESIKCC-FCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATK 454
+C C + E CC CE+ +H KC+ T + +KC C T+
Sbjct: 202 ICGACGEAYANGEFWICCDICETWFHGKCVRITPAK----AEHIKHYKCPGCSNKRTR 255
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 585 SIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCA-VCQKSATKLSNEV 439
+++C CE +YH KC+ K +C W C CQ+ L + V
Sbjct: 1106 ALECAQCERQYHAKCI--YGKLLCNEEGGPCAWFCGRRCQQIYMNLRSRV 1153
>04_03_0318 + 14296001-14296630
Length = 209
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = -3
Query: 324 LVTERIDKQNEQILHEI----DEIKTKLNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHL 157
++ E+++K EQ LH++ DE +TKL I + ++ E S N HL
Sbjct: 85 ILNEQVNKLKEQ-LHKVGRDADESETKLLLIEAINGHRPSLEGLTIEQITSLGWMANAHL 143
Query: 156 QMVNNTEKSVR 124
++VN+ K +R
Sbjct: 144 KIVNDRLKKLR 154
>03_05_1150 -
30758981-30759778,30759970-30760729,30760823-30760920,
30761997-30762521
Length = 726
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 487 PLISPISSFADTFSRFIHTLRMVFRFAKTTFDTFSVPK 600
PL++P SS A+T + F+ + ++ FDTF K
Sbjct: 299 PLVAPWSSIANTAAGFVMFIYLIVPLCYWKFDTFDARK 336
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = -3
Query: 621 CAYCHRTLRHAES--IKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLS 448
CA C T + C C+ H C S GD W C+VC +A K S
Sbjct: 408 CAVCGSTDGDPSDPIVFCDGCDLMVHASCYGNPLASFIPDGD----WFCSVCTAAAAKKS 463
>08_02_1490 +
27495155-27495334,27495437-27495746,27495865-27495965,
27496620-27496661,27496763-27496884,27496954-27497062,
27497309-27497362
Length = 305
Score = 28.7 bits (61), Expect = 5.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -3
Query: 621 CAYCHRTLRHAESIKCCFCESKYHTKCMNE 532
C C ES+ C+ YH++C+N+
Sbjct: 253 CVICRVEFEEGESLVALPCKHSYHSECINQ 282
>06_03_0214 + 18067945-18068463,18068940-18069839,18069918-18070652
Length = 717
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -3
Query: 291 QILHEIDEI-KTKLNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNTEKSVRYRT 115
+ LHE + + + +R + + ++ A + +S RL D+L +KS+R
Sbjct: 364 EYLHEFNNLARYAPEDVREDEEKQEKFL-AGMDPELSVRLISGDYLDFQRLVDKSIRLEA 422
Query: 114 RRRSYLLHNMLRLLNSRNK 58
+ + + H RL N RN+
Sbjct: 423 KHKEQVSHKR-RLANFRNQ 440
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = -3
Query: 363 QLPKLHNELAHVKLVTERIDKQNEQILHEIDEIKTKLNGIRTVKHNKHRYRNAHFEDRVS 184
Q + EL+ + V E ++ Q +++E+DE+K + ++++H K R R++
Sbjct: 971 QSETMQRELSDARSVIEALESQQIMLINELDELKE--SNQQSLEHLKKRDLEI---SRLN 1025
Query: 183 NRLDDNDHLQMVNNTEKSVR 124
N LD + + + E V+
Sbjct: 1026 NELDVHRRQEFLAMEEPKVQ 1045
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Frame = -3
Query: 465 SATKLSNEVQNSK----EINIENTLNLLS--EKFELVNKI--QLPKLHNELAHVKLVTER 310
S +L NE+Q+ + ++N E L + E V+ + QL KL EL ++ +
Sbjct: 423 SKNELQNEIQSLRSTISQLNTEKDATLFQHQQSVERVSDLESQLLKLQPELEEIEQKVQM 482
Query: 309 IDKQNEQILHEID----EIKTKLNGIRTVKHNKHRYRNAH 202
+ + EQ E D +++ + N + + HR++N H
Sbjct: 483 LMQDLEQKRQEADSAHAQLQDECNRHTQTEADLHRFKNLH 522
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,175,645
Number of Sequences: 37544
Number of extensions: 318738
Number of successful extensions: 941
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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