Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10c02
(809 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 34 0.005
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 29 0.22
DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein. 25 3.7
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 24 6.4
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 6.4
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 6.4
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 24 6.4
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 24 6.4
DQ004402-1|AAY21241.1| 144|Anopheles gambiae lysozyme c-8 protein. 23 8.4
AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase inhi... 23 8.4
AY659930-1|AAT51798.2| 144|Anopheles gambiae lysozyme c-3 protein. 23 8.4
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 34.3 bits (75), Expect = 0.005
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -3
Query: 627 MVCAYCHRTLRHAESIKCC-FCESKYHTKCMNETAKSICE-GGDRGYQWKCAVCQK 466
M C+ C+ A S+ C C SK+HT C + S E G + W C C +
Sbjct: 35 MQCSTCNAPTDSANSVSCAGVCGSKHHTHCTGLSRDSTRELGRNNQLLWLCKNCNE 90
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 28.7 bits (61), Expect = 0.22
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = -3
Query: 666 FNWVHSLLSNFQRMVCAYCHRTLRHAESIKCCFCESKYHTKCM 538
F + +L +C CH+ L ++C C+ H +C+
Sbjct: 324 FTHIFQILPPSYDRLCQQCHKALHLDIGLRCVVCDFTCHQQCV 366
>DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein.
Length = 511
Score = 24.6 bits (51), Expect = 3.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 177 LDDNDHLQMVNNTEKSVRYRTRRRSYLLHNMLRLLNSRNKVRRRR*MKQD 28
LDD + ++ S R RRS+L ++ L+ + V R+ +K D
Sbjct: 235 LDDEQEVMQAVESQGSRRKFNVRRSFLTGDIASALSGNSLVGRKANLKDD 284
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 23.8 bits (49), Expect = 6.4
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = -3
Query: 624 VCAYCHRTLRHAESI-KCCFCESKYHTKCMN---ETAKSICEGGDRGYQWKCAVC 472
+C C L I C +C++ +H C E ++ D W C C
Sbjct: 15 ICFSCAEPLEATGCIISCAYCDATFHRGCCKLPPELIDAVLSNVD--LHWSCIGC 67
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.8 bits (49), Expect = 6.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 523 FSRFIHTLRMVFRFAKTTFDTFSV 594
F FI TLRMV + K++ FSV
Sbjct: 2993 FYTFIVTLRMVDAYEKSSIPGFSV 3016
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.8 bits (49), Expect = 6.4
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 483 ISIDIPDLLLRRYF*PFHSYTSYGISIRKNN 575
+SI +P+ L + PFH++ S ++ ++N
Sbjct: 122 LSIGVPETLEALFAFPFHAWASESPTLNQDN 152
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.8 bits (49), Expect = 6.4
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 483 ISIDIPDLLLRRYF*PFHSYTSYGISIRKNN 575
+SI +P+ L + PFH++ S ++ ++N
Sbjct: 122 LSIGVPETLEALFAFPFHAWASESPTLNQDN 152
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 23.8 bits (49), Expect = 6.4
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 371 FTSSNFSLNKFNVFSILISLEF*TSFDSFVADFWQTAHF 487
+TSS S N V S + L + + + FWQ + F
Sbjct: 422 YTSSELSFNDITVDSFDVQLNKANAPKNVLLTFWQRSQF 460
>DQ004402-1|AAY21241.1| 144|Anopheles gambiae lysozyme c-8 protein.
Length = 144
Score = 23.4 bits (48), Expect = 8.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 271 IYFVQNLLVLLIDPFGHQFHVCQLIMQL 354
++FV LL +L +G F+ C+L+ L
Sbjct: 3 LFFVTILLAVLGTTYGKVFNKCELVRLL 30
>AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase
inhibitor protein protein.
Length = 335
Score = 23.4 bits (48), Expect = 8.4
Identities = 13/65 (20%), Positives = 29/65 (44%)
Frame = -3
Query: 579 KCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSNEVQNSKEINIENTLN 400
K C +Y C+ T C G + +KC S + ++ + ++ +I++ N N
Sbjct: 92 KTCALNGEY---CL--THMECCSGNCLTFSYKCVPLSPSDSAMTGPLYSTPQISMVNFTN 146
Query: 399 LLSEK 385
+ ++
Sbjct: 147 RIGDE 151
>AY659930-1|AAT51798.2| 144|Anopheles gambiae lysozyme c-3 protein.
Length = 144
Score = 23.4 bits (48), Expect = 8.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 271 IYFVQNLLVLLIDPFGHQFHVCQLIMQL 354
++FV LL +L +G F+ C+L+ L
Sbjct: 3 LFFVTILLAVLGTTYGKVFNKCELVRLL 30
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,316
Number of Sequences: 2352
Number of extensions: 15398
Number of successful extensions: 72
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -