Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10b24
(852 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 426 e-120
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 423 e-119
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 419 e-117
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 411 e-115
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 166 2e-41
03_01_0034 + 318432-318825,318902-319851 166 2e-41
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 166 2e-41
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 165 3e-41
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 164 9e-41
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 164 9e-41
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 163 1e-40
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 161 6e-40
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 81 8e-16
01_06_1014 - 33810112-33811995 31 0.88
12_02_1026 - 25478462-25479232,25479249-25479821 29 4.7
03_02_0666 + 10282355-10282403,10282692-10282963,10283125-10283508 29 4.7
11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371 29 6.2
04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065 29 6.2
07_03_0700 + 20797600-20798064 28 8.2
07_01_0008 - 56178-57095 28 8.2
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 426 bits (1050), Expect = e-120
Identities = 191/223 (85%), Positives = 210/223 (94%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPV
Sbjct: 216 SLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPV 275
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
ISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TI
Sbjct: 276 ISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATI 335
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
KTKRT+QFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE +SR++HKF
Sbjct: 336 KTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKF 395
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 124
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 37.1 bits (82), Expect = 0.018
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
H+D A ++DNEAIYDICRR
Sbjct: 197 HTDVAVLLDNEAIYDICRR 215
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 423 bits (1042), Expect = e-119
Identities = 188/224 (83%), Positives = 211/224 (94%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPV
Sbjct: 216 SLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPV 275
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
ISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TI
Sbjct: 276 ISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATI 335
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
KTKRTIQFVDWCPTGFK GINYQPP+VVP GDLAKVQRAVCM+SN+T++ E +SR++HKF
Sbjct: 336 KTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKF 395
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 121
DLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +S
Sbjct: 396 DLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES 439
Score = 37.1 bits (82), Expect = 0.018
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
H+D A ++DNEAIYDICRR
Sbjct: 197 HTDVAVLLDNEAIYDICRR 215
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 419 bits (1033), Expect = e-117
Identities = 187/223 (83%), Positives = 210/223 (94%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPV
Sbjct: 216 SLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPV 275
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
ISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TI
Sbjct: 276 ISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATI 335
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
KTKRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN+T++ E +SR++ KF
Sbjct: 336 KTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKF 395
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 124
DLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 396 DLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGSE 438
Score = 37.1 bits (82), Expect = 0.018
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
H+D A ++DNEAIYDICRR
Sbjct: 197 HTDVAVLLDNEAIYDICRR 215
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 411 bits (1011), Expect = e-115
Identities = 182/223 (81%), Positives = 206/223 (92%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
+LDIERPTYTNLNRLI Q++SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+
Sbjct: 297 SLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPI 356
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
IS EKA+HEQ SV EITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ +I
Sbjct: 357 ISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSI 416
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
KT+RT+QFVDWCPTGFK GINYQPPT VPGGDLAKV+RAVCM+SN TA+AE +SR++ KF
Sbjct: 417 KTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKF 476
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 124
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 477 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 519
Score = 34.3 bits (75), Expect = 0.13
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
H+D ++DNEAIYDIC+R
Sbjct: 278 HTDVVVLLDNEAIYDICKR 296
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 166 bits (403), Expect = 2e-41
Identities = 77/219 (35%), Positives = 127/219 (57%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+
Sbjct: 214 TLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 273
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + +
Sbjct: 274 TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
+ K + FV+W P K + PP ++ A + N+T+I E + R++ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDIPP--------RGLKMAATFVGNSTSIQEMFRRVSEQF 385
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 136
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D ++DNEA+YDIC R
Sbjct: 195 NADECMVLDNEALYDICFR 213
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 166 bits (403), Expect = 2e-41
Identities = 77/219 (35%), Positives = 128/219 (58%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+
Sbjct: 214 TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 273
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + +
Sbjct: 274 TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
+ K + FV+W P K + PPT ++ A + N+T+I E + R++ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 136
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D ++DNEA+YDIC R
Sbjct: 195 NADECMVLDNEALYDICFR 213
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 166 bits (403), Expect = 2e-41
Identities = 77/219 (35%), Positives = 127/219 (57%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+
Sbjct: 214 TLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 273
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + +
Sbjct: 274 TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
+ K + FV+W P K + PP ++ A + N+T+I E + R++ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDIPPN--------GLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 136
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D ++DNEA+YDIC R
Sbjct: 195 NADECMVLDNEALYDICFR 213
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 165 bits (402), Expect = 3e-41
Identities = 77/219 (35%), Positives = 127/219 (57%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+
Sbjct: 214 TLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 273
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + +
Sbjct: 274 TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNV 333
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
+ K + FV+W P K + PP ++ A + N+T+I E + R++ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDIPP--------IGLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 136
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D ++DNEA+YDIC R
Sbjct: 195 NADECMVLDNEALYDICFR 213
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 164 bits (398), Expect = 9e-41
Identities = 76/219 (34%), Positives = 126/219 (57%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+
Sbjct: 235 TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 294
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + +
Sbjct: 295 TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 354
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
+ K + FV+W P K + PP + A + N+T+I E + R++ +F
Sbjct: 355 QNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQF 406
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 136
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 407 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 445
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D ++DNEA+YDIC R
Sbjct: 216 NADECMVLDNEALYDICFR 234
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 164 bits (398), Expect = 9e-41
Identities = 76/219 (34%), Positives = 126/219 (57%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+
Sbjct: 214 TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 273
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + +
Sbjct: 274 TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
+ K + FV+W P K + PP + A + N+T+I E + R++ +F
Sbjct: 334 QNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQF 385
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 136
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D ++DNEA+YDIC R
Sbjct: 195 NADECMVLDNEALYDICFR 213
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 163 bits (397), Expect = 1e-40
Identities = 76/219 (34%), Positives = 126/219 (57%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+
Sbjct: 394 TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 453
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + +
Sbjct: 454 TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 513
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
+ K + FV+W P K + PP + A + N+T+I E + R++ +F
Sbjct: 514 QNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFVGNSTSIQEMFRRVSEQF 565
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 136
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 566 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 604
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D ++DNEA+YDIC R
Sbjct: 375 NADECMVLDNEALYDICFR 393
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 161 bits (391), Expect = 6e-40
Identities = 75/219 (34%), Positives = 125/219 (57%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+
Sbjct: 230 TLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 289
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTI 433
S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + +
Sbjct: 290 TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINV 349
Query: 432 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKF 253
+ K + FV+W P K + PP + A + N+T+I E + R++ +F
Sbjct: 350 QNKNSSYFVEWIPNNVKSSVCDIPP--------VGLSMASTFVGNSTSIQEMFRRVSEQF 401
Query: 252 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 136
M+ ++AF+HWY EGM+E EF+EA ++ L +Y++
Sbjct: 402 TAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQ 440
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D ++DNEA+YDIC R
Sbjct: 211 NADECMVLDNEALYDICFR 229
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 81.4 bits (192), Expect = 8e-16
Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 10/227 (4%)
Frame = -1
Query: 789 LDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV- 613
L + PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 218 LHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLT 277
Query: 612 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNA 448
+ + + +V ++ + N MV R+ KY++ + +G+V P V+
Sbjct: 278 VERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHE 337
Query: 447 AIGTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSR 268
++ I+ ++ + F++W P A +Q + ML+N T+I +S+
Sbjct: 338 SLQRIRERKLVNFIEWGP--------------------ASIQVSGLMLANHTSIRHLFSK 377
Query: 267 LNHKFDLMYAKRAFVHWY----VGEGMEEGEFSEAREDLAALEKDYE 139
+++ + K+AF+ Y + E + EF E+RE + +L +Y+
Sbjct: 378 CLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.88
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 240 AKRAFVHWYVGEGMEEGEFSEAREDL 163
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>12_02_1026 - 25478462-25479232,25479249-25479821
Length = 447
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -3
Query: 403 LVPDRIQGGDKLSATNCGTGWRFGEGAARRVHA----VQYYCHSRGV 275
LV + GGD LS R E AARRV YCH+RGV
Sbjct: 99 LVMELATGGDLLSRLAALPRRRLPESAARRVFVQLVDALSYCHARGV 145
>03_02_0666 + 10282355-10282403,10282692-10282963,10283125-10283508
Length = 234
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 215 YQCTNARLAYIKSNLWLRRDHASAMAVVLDSMH 313
Y+ N R+ Y+KSN W H A + ++D++H
Sbjct: 112 YKIENYRVLYLKSNCW----HEGASSEIIDAIH 140
>11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371
Length = 680
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -2
Query: 152 RKTTKRWEWIPVRAREKAARNINFTIYFLGCLWILLRSRVCFSLWL 15
R+ T +W+ P +E+A + T+ + W LR R C + +L
Sbjct: 343 RQETVQWKLFPFSLQERAKQWYTSTVGCVNGSWEKLRDRFCLAFFL 388
>04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065
Length = 194
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 699 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 571
A ++D T +N VPY + TY P ++ K E+ S A
Sbjct: 126 ASSIDHTLNSSNAVPYDGTRYEQTTYGPTLTKRKPGKERSSTA 168
>07_03_0700 + 20797600-20798064
Length = 154
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 272 LASTTSLI*CMPSVHS--CIGTWERGWRKASFQKPVRI 165
+ S+ +++ C P + C+G W+ WR+A ++ + I
Sbjct: 69 MVSSAAVLFCFPGIWGPFCLGLWKTIWRRAGWRGLINI 106
>07_01_0008 - 56178-57095
Length = 305
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +3
Query: 174 GLLKTRLPPSPLPRTNARMHAWHTSNQTCG*GETTPLLWQ*YWTACTRRAA-PSPNLHPV 350
G + L PS P AR+H+W N T Q +A +RR A P +LHP+
Sbjct: 118 GTAASHLAPSSAP---ARLHSWIHYNATSA-------TLQLRLSATSRRPALPLLSLHPL 167
Query: 351 PQLVADSLSPP*ILSGTSLQTEWCVSF*W 437
P L +L+G + C F W
Sbjct: 168 PPSALLLLRTKPMLAGFTSSATNCTLFAW 196
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,255,985
Number of Sequences: 37544
Number of extensions: 572058
Number of successful extensions: 1694
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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