Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10b24
(852 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 71 4e-14
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 71 4e-14
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 71 4e-14
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 71 4e-14
AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsiv... 26 1.7
CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply, Sphingosine... 25 3.9
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 24 5.1
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 24 5.1
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 4e-14
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+
Sbjct: 110 TLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 169
Query: 612 ISAEKAYHEQLSVAEIT 562
S + L+V E+T
Sbjct: 170 TSRGSQQYRALTVPELT 186
Score = 29.5 bits (63), Expect = 0.14
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D + +DNEA+YDIC R
Sbjct: 91 NTDETYCIDNEALYDICFR 109
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 4e-14
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+
Sbjct: 110 TLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 169
Query: 612 ISAEKAYHEQLSVAEIT 562
S + L+V E+T
Sbjct: 170 TSRGSQQYRALTVPELT 186
Score = 29.5 bits (63), Expect = 0.14
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D + +DNEA+YDIC R
Sbjct: 91 NTDETYCIDNEALYDICFR 109
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 4e-14
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+
Sbjct: 110 TLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 169
Query: 612 ISAEKAYHEQLSVAEIT 562
S + L+V E+T
Sbjct: 170 TSRGSQQYRALTVPELT 186
Score = 29.5 bits (63), Expect = 0.14
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D + +DNEA+YDIC R
Sbjct: 91 NTDETYCIDNEALYDICFR 109
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 4e-14
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = -1
Query: 792 TLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 613
TL + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+
Sbjct: 110 TLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 169
Query: 612 ISAEKAYHEQLSVAEIT 562
S + L+V E+T
Sbjct: 170 TSRGSQQYRALTVPELT 186
Score = 29.5 bits (63), Expect = 0.14
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 850 HSDAAFMVDNEAIYDICRR 794
++D + +DNEA+YDIC R
Sbjct: 91 NTDETYCIDNEALYDICFR 109
>AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsive
protein 2 protein.
Length = 439
Score = 25.8 bits (54), Expect = 1.7
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 379 HLESCRAPVYKLNGAFRFDGANGGIYILRNHVSS 480
H E A + +L AFR DG GI +L +HV+S
Sbjct: 192 HREEFTALLRELKNAFRSDGYQLGITVL-SHVNS 224
>CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply,
Sphingosine-phosphate lyase protein.
Length = 519
Score = 24.6 bits (51), Expect = 3.9
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 28 KHTLDLSKIQRHPKK*IVKLIFLAAFSLALTGIHSHLFVVFLEGGQI 168
KH +D ++ + I + + ++ GI S F +FL GG++
Sbjct: 380 KHIIDTTRYIEQELRAIKNIFIFGTPATSVIGIGSRDFDIFLLGGEL 426
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 24.2 bits (50), Expect = 5.1
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +1
Query: 289 GSSIGQHAHGALHLRQ 336
G+ IG+ ++GALH++Q
Sbjct: 515 GNDIGRSSYGALHVKQ 530
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 24.2 bits (50), Expect = 5.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -1
Query: 357 TVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFV 223
T + D+AKV+ AV + + ++ + +N+ +DL A A +
Sbjct: 991 TALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATYAMM 1035
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 917,656
Number of Sequences: 2352
Number of extensions: 20940
Number of successful extensions: 107
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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