Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10b22
(846 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012497-1|AAS93768.1| 478|Drosophila melanogaster GH28815p pro... 118 1e-26
AE014297-712|AAG22134.2| 478|Drosophila melanogaster CG33722-PC... 118 1e-26
AE014297-711|AAO41516.1| 478|Drosophila melanogaster CG33722-PB... 118 1e-26
AY069610-1|AAL39755.1| 441|Drosophila melanogaster LD37137p pro... 44 2e-04
AE013599-2740|AAF57656.2| 441|Drosophila melanogaster CG5469-PD... 44 2e-04
AE013599-2739|AAM68442.1| 441|Drosophila melanogaster CG5469-PC... 44 2e-04
AE013599-2738|AAF57657.2| 441|Drosophila melanogaster CG5469-PB... 44 2e-04
AY094730-1|AAM11083.1| 1372|Drosophila melanogaster GH25780p pro... 29 6.1
AE014297-134|AAO41500.1| 1372|Drosophila melanogaster CG31531-PC... 29 6.1
AE014297-133|AAF52105.2| 1372|Drosophila melanogaster CG31531-PB... 29 6.1
AE014297-132|AAF52104.2| 1372|Drosophila melanogaster CG31531-PA... 29 6.1
>BT012497-1|AAS93768.1| 478|Drosophila melanogaster GH28815p
protein.
Length = 478
Score = 118 bits (283), Expect = 1e-26
Identities = 60/185 (32%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Frame = -3
Query: 703 LGTQKAIVFTQPEIIENDLEDLPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMXXXXXX 524
+G ++A++F+ E +N DLPD F++LT+ +++ + +DL++ ++ PL+
Sbjct: 286 IGPRQAVLFSLDESKKN-ANDLPDSFFDLTVNDLKMVLRDLKRTSSGDDDAPLLTAKLRE 344
Query: 523 XXXXXXXXXXKLNKYKNAVVRIQFPDHMILQGIFAPTDTIEDVTNFLKEHLAHPEKPFHI 344
LN+YK+ V+RIQFPD +LQG+F P + + V +F++E L P + FH+
Sbjct: 345 LERQKAMLAK-LNQYKDCVLRIQFPDRFVLQGMFKPHEPLSKVEDFVREFLVQPGEQFHL 403
Query: 343 FTTPLKETLEPKMTLLEARFVPCVHMHFKWLEENPDSL---YLKKEIYSNTTTSDAASIL 173
FT P K+ L TLLE FVP +HF +++++ +++ ++K+E T+ + A
Sbjct: 404 FTIPPKKVLPSGETLLELNFVPNAIVHFGFIKDSLNAVSNRFVKEEYVDQLTSEEGAHYA 463
Query: 172 ASKYR 158
KYR
Sbjct: 464 VQKYR 468
>AE014297-712|AAG22134.2| 478|Drosophila melanogaster CG33722-PC,
isoform C protein.
Length = 478
Score = 118 bits (283), Expect = 1e-26
Identities = 60/185 (32%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Frame = -3
Query: 703 LGTQKAIVFTQPEIIENDLEDLPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMXXXXXX 524
+G ++A++F+ E +N DLPD F++LT+ +++ + +DL++ ++ PL+
Sbjct: 286 IGPRQAVLFSLDESKKN-ANDLPDSFFDLTVNDLKMVLRDLKRTSSGDDDAPLLTAKLRE 344
Query: 523 XXXXXXXXXXKLNKYKNAVVRIQFPDHMILQGIFAPTDTIEDVTNFLKEHLAHPEKPFHI 344
LN+YK+ V+RIQFPD +LQG+F P + + V +F++E L P + FH+
Sbjct: 345 LERQKAMLAK-LNQYKDCVLRIQFPDRFVLQGMFKPHEPLSKVEDFVREFLVQPGEQFHL 403
Query: 343 FTTPLKETLEPKMTLLEARFVPCVHMHFKWLEENPDSL---YLKKEIYSNTTTSDAASIL 173
FT P K+ L TLLE FVP +HF +++++ +++ ++K+E T+ + A
Sbjct: 404 FTIPPKKVLPSGETLLELNFVPNAIVHFGFIKDSLNAVSNRFVKEEYVDQLTSEEGAHYA 463
Query: 172 ASKYR 158
KYR
Sbjct: 464 VQKYR 468
>AE014297-711|AAO41516.1| 478|Drosophila melanogaster CG33722-PB,
isoform B protein.
Length = 478
Score = 118 bits (283), Expect = 1e-26
Identities = 60/185 (32%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Frame = -3
Query: 703 LGTQKAIVFTQPEIIENDLEDLPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMXXXXXX 524
+G ++A++F+ E +N DLPD F++LT+ +++ + +DL++ ++ PL+
Sbjct: 286 IGPRQAVLFSLDESKKN-ANDLPDSFFDLTVNDLKMVLRDLKRTSSGDDDAPLLTAKLRE 344
Query: 523 XXXXXXXXXXKLNKYKNAVVRIQFPDHMILQGIFAPTDTIEDVTNFLKEHLAHPEKPFHI 344
LN+YK+ V+RIQFPD +LQG+F P + + V +F++E L P + FH+
Sbjct: 345 LERQKAMLAK-LNQYKDCVLRIQFPDRFVLQGMFKPHEPLSKVEDFVREFLVQPGEQFHL 403
Query: 343 FTTPLKETLEPKMTLLEARFVPCVHMHFKWLEENPDSL---YLKKEIYSNTTTSDAASIL 173
FT P K+ L TLLE FVP +HF +++++ +++ ++K+E T+ + A
Sbjct: 404 FTIPPKKVLPSGETLLELNFVPNAIVHFGFIKDSLNAVSNRFVKEEYVDQLTSEEGAHYA 463
Query: 172 ASKYR 158
KYR
Sbjct: 464 VQKYR 468
>AY069610-1|AAL39755.1| 441|Drosophila melanogaster LD37137p
protein.
Length = 441
Score = 44.4 bits (100), Expect = 2e-04
Identities = 29/99 (29%), Positives = 47/99 (47%)
Frame = -3
Query: 640 LPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMXXXXXXXXXXXXXXXXKLNKYKNAVVR 461
LPD+FY L+ EE++K +Q+L+ E L Y+ A+VR
Sbjct: 293 LPDEFYRLSPEEIKK------EQQLRSEAIA-QSQMLRTKAMREREEQRNLRMYRYALVR 345
Query: 460 IQFPDHMILQGIFAPTDTIEDVTNFLKEHLAHPEKPFHI 344
++FP+ + +QG F + I DV F++ LA F +
Sbjct: 346 VKFPNGLFIQGTFNVYEKISDVFEFVQSCLADESLDFSL 384
>AE013599-2740|AAF57656.2| 441|Drosophila melanogaster CG5469-PD,
isoform D protein.
Length = 441
Score = 44.4 bits (100), Expect = 2e-04
Identities = 29/99 (29%), Positives = 47/99 (47%)
Frame = -3
Query: 640 LPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMXXXXXXXXXXXXXXXXKLNKYKNAVVR 461
LPD+FY L+ EE++K +Q+L+ E L Y+ A+VR
Sbjct: 293 LPDEFYRLSPEEIKK------EQQLRSEAIA-QSQMLRTKAMREREEQRNLRMYRYALVR 345
Query: 460 IQFPDHMILQGIFAPTDTIEDVTNFLKEHLAHPEKPFHI 344
++FP+ + +QG F + I DV F++ LA F +
Sbjct: 346 VKFPNGLFIQGTFNVYEKISDVFEFVQSCLADESLDFSL 384
>AE013599-2739|AAM68442.1| 441|Drosophila melanogaster CG5469-PC,
isoform C protein.
Length = 441
Score = 44.4 bits (100), Expect = 2e-04
Identities = 29/99 (29%), Positives = 47/99 (47%)
Frame = -3
Query: 640 LPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMXXXXXXXXXXXXXXXXKLNKYKNAVVR 461
LPD+FY L+ EE++K +Q+L+ E L Y+ A+VR
Sbjct: 293 LPDEFYRLSPEEIKK------EQQLRSEAIA-QSQMLRTKAMREREEQRNLRMYRYALVR 345
Query: 460 IQFPDHMILQGIFAPTDTIEDVTNFLKEHLAHPEKPFHI 344
++FP+ + +QG F + I DV F++ LA F +
Sbjct: 346 VKFPNGLFIQGTFNVYEKISDVFEFVQSCLADESLDFSL 384
>AE013599-2738|AAF57657.2| 441|Drosophila melanogaster CG5469-PB,
isoform B protein.
Length = 441
Score = 44.4 bits (100), Expect = 2e-04
Identities = 29/99 (29%), Positives = 47/99 (47%)
Frame = -3
Query: 640 LPDDFYELTIEEVRKLYKDLQQQRLKLENTPLMXXXXXXXXXXXXXXXXKLNKYKNAVVR 461
LPD+FY L+ EE++K +Q+L+ E L Y+ A+VR
Sbjct: 293 LPDEFYRLSPEEIKK------EQQLRSEAIA-QSQMLRTKAMREREEQRNLRMYRYALVR 345
Query: 460 IQFPDHMILQGIFAPTDTIEDVTNFLKEHLAHPEKPFHI 344
++FP+ + +QG F + I DV F++ LA F +
Sbjct: 346 VKFPNGLFIQGTFNVYEKISDVFEFVQSCLADESLDFSL 384
>AY094730-1|AAM11083.1| 1372|Drosophila melanogaster GH25780p protein.
Length = 1372
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -3
Query: 403 EDVTNFLKEHLAHPEKPFHIFTTPLKETLEPKMTLLEARFVPCVHMHFKWLEENPDSLYL 224
+++ +FL+ + H E+P H T L ETLE K+ L + V +++ + YL
Sbjct: 1255 KNIFDFLRRNFGHQEEPQHHST--LNETLEKKVVLTSTKSGVDVVNADEFVRVDNSKFYL 1312
Query: 223 KKEI 212
E+
Sbjct: 1313 ASEL 1316
>AE014297-134|AAO41500.1| 1372|Drosophila melanogaster CG31531-PC,
isoform C protein.
Length = 1372
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -3
Query: 403 EDVTNFLKEHLAHPEKPFHIFTTPLKETLEPKMTLLEARFVPCVHMHFKWLEENPDSLYL 224
+++ +FL+ + H E+P H T L ETLE K+ L + V +++ + YL
Sbjct: 1255 KNIFDFLRRNFGHQEEPQHHST--LNETLEKKVVLTSTKSGVDVVNADEFVRVDNSKFYL 1312
Query: 223 KKEI 212
E+
Sbjct: 1313 ASEL 1316
>AE014297-133|AAF52105.2| 1372|Drosophila melanogaster CG31531-PB,
isoform B protein.
Length = 1372
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -3
Query: 403 EDVTNFLKEHLAHPEKPFHIFTTPLKETLEPKMTLLEARFVPCVHMHFKWLEENPDSLYL 224
+++ +FL+ + H E+P H T L ETLE K+ L + V +++ + YL
Sbjct: 1255 KNIFDFLRRNFGHQEEPQHHST--LNETLEKKVVLTSTKSGVDVVNADEFVRVDNSKFYL 1312
Query: 223 KKEI 212
E+
Sbjct: 1313 ASEL 1316
>AE014297-132|AAF52104.2| 1372|Drosophila melanogaster CG31531-PA,
isoform A protein.
Length = 1372
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -3
Query: 403 EDVTNFLKEHLAHPEKPFHIFTTPLKETLEPKMTLLEARFVPCVHMHFKWLEENPDSLYL 224
+++ +FL+ + H E+P H T L ETLE K+ L + V +++ + YL
Sbjct: 1255 KNIFDFLRRNFGHQEEPQHHST--LNETLEKKVVLTSTKSGVDVVNADEFVRVDNSKFYL 1312
Query: 223 KKEI 212
E+
Sbjct: 1313 ASEL 1316
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,157,492
Number of Sequences: 53049
Number of extensions: 641574
Number of successful extensions: 1542
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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