Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10b21
(836 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542109-1|CAG46906.1| 239|Homo sapiens NET-5 protein. 42 0.003
BC071881-1|AAH71881.1| 239|Homo sapiens tetraspanin 9 protein. 42 0.003
AK223179-1|BAD96899.1| 239|Homo sapiens tetraspan NET-5 variant... 42 0.003
AF089749-1|AAC35859.1| 239|Homo sapiens tetraspan NET-5 protein. 42 0.003
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 35 0.42
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 35 0.42
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 35 0.42
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 35 0.42
DQ323735-1|ABD58927.1| 541|Homo sapiens wntless protein protein. 34 0.56
BC110826-1|AAI10827.1| 541|Homo sapiens G protein-coupled recep... 34 0.56
BC007211-1|AAH07211.2| 487|Homo sapiens GPR177 protein protein. 34 0.56
AY359035-1|AAQ89394.1| 541|Homo sapiens AGAI857 protein. 34 0.56
AL513284-6|CAI15027.1| 543|Homo sapiens G protein-coupled recep... 34 0.56
AL513284-4|CAI15024.1| 541|Homo sapiens G protein-coupled recep... 34 0.56
AL513284-3|CAI15025.1| 450|Homo sapiens G protein-coupled recep... 34 0.56
AL157407-4|CAI21993.1| 543|Homo sapiens G protein-coupled recep... 34 0.56
AK074990-1|BAC11339.1| 710|Homo sapiens protein ( Homo sapiens ... 34 0.56
AK074984-1|BAC11333.1| 541|Homo sapiens protein ( Homo sapiens ... 34 0.56
AK026744-1|BAB15540.1| 305|Homo sapiens protein ( Homo sapiens ... 34 0.56
M60871-1|AAA51951.1| 219|Homo sapiens cell surface antigen prot... 34 0.73
M37033-1|AAA35663.1| 219|Homo sapiens CD53 glycoprotein protein. 34 0.73
CR457108-1|CAG33389.1| 238|Homo sapiens TM4SF7 protein. 34 0.73
BT019643-1|AAV38449.1| 219|Homo sapiens CD53 antigen protein. 34 0.73
BT006776-1|AAP35422.1| 238|Homo sapiens transmembrane 4 superfa... 34 0.73
BC093031-1|AAH93031.1| 238|Homo sapiens tetraspanin 4 protein. 34 0.73
BC040693-1|AAH40693.1| 219|Homo sapiens CD53 molecule protein. 34 0.73
BC019314-1|AAH19314.1| 238|Homo sapiens tetraspanin 4 protein. 34 0.73
BC000389-1|AAH00389.1| 238|Homo sapiens tetraspanin 4 protein. 34 0.73
AL391064-1|CAH73292.1| 219|Homo sapiens CD53 molecule protein. 34 0.73
AF054841-1|AAC69717.1| 238|Homo sapiens tetraspan TM4SF protein. 34 0.73
AF022813-1|AAC51864.1| 238|Homo sapiens tetraspan protein. 34 0.73
AF054838-1|AAC69714.1| 241|Homo sapiens tetraspan TM4SF protein. 33 0.97
BC011206-1|AAH11206.1| 253|Homo sapiens tetraspanin 3 protein. 33 1.3
BC009248-1|AAH09248.1| 253|Homo sapiens tetraspanin 3 protein. 33 1.3
BC004280-1|AAH04280.1| 253|Homo sapiens tetraspanin 3 protein. 33 1.3
BC000704-1|AAH00704.1| 252|Homo sapiens tetraspanin 3 protein. 33 1.3
AK001326-1|BAA91627.1| 253|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK001310-1|BAA91615.1| 253|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK001305-1|BAA91613.1| 253|Homo sapiens protein ( Homo sapiens ... 33 1.3
AF133423-1|AAF08362.1| 253|Homo sapiens tetraspanin TM4-A protein. 33 1.3
AF054840-1|AAC69716.1| 253|Homo sapiens tetraspan TM4SF protein. 33 1.3
AF189713-1|AAF23374.1| 586|Homo sapiens MLL septin-like fusion ... 33 1.7
BC013404-1|AAH13404.1| 241|Homo sapiens tetraspanin 1 protein. 32 2.2
BC007290-1|AAH07290.1| 241|Homo sapiens tetraspanin 1 protein. 32 2.2
AL672043-1|CAH72468.1| 241|Homo sapiens tetraspanin 1 protein. 32 2.2
AF133425-1|AAF08364.1| 241|Homo sapiens tetraspanin TM4-C protein. 32 2.2
AF065388-1|AAC17119.1| 241|Homo sapiens tetraspan NET-1 protein. 32 2.2
CR457084-1|CAG33365.1| 260|Homo sapiens UPK1B protein. 31 6.8
BC063568-1|AAH63568.1| 260|Homo sapiens uroplakin 1B protein. 31 6.8
AF082888-1|AAD09401.1| 242|Homo sapiens uroplakin IB protein. 31 6.8
AF042331-1|AAC77794.1| 260|Homo sapiens uroplakin 1B protein. 31 6.8
AB015234-1|BAA33724.1| 260|Homo sapiens uroplakin 1b protein. 31 6.8
AB002155-1|BAA88878.1| 260|Homo sapiens human uroplakin Ib prot... 31 6.8
M35252-1|AAA35709.1| 237|Homo sapiens protein ( Human CO-029. ). 30 9.0
BC107098-1|AAI07099.1| 258|Homo sapiens uroplakin 1A protein. 30 9.0
BC031265-1|AAH31265.1| 305|Homo sapiens tetraspanin 12 protein. 30 9.0
BC005246-1|AAH05246.1| 237|Homo sapiens tetraspanin 8 protein. 30 9.0
AY358703-1|AAQ89066.1| 305|Homo sapiens NET-2 protein. 30 9.0
AK223022-1|BAD96742.1| 237|Homo sapiens transmembrane 4 superfa... 30 9.0
AF124522-1|AAD17317.1| 305|Homo sapiens tetraspan NET-2 protein. 30 9.0
AC004456-1|AAQ96879.1| 305|Homo sapiens unknown protein. 30 9.0
>CR542109-1|CAG46906.1| 239|Homo sapiens NET-5 protein.
Length = 239
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -2
Query: 442 VRSSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGC 275
+++++ +Q E++CCGV DWY ++ P CC +++ G PL+ TGC
Sbjct: 134 LKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCC-MENSQGCGRNATTPLWRTGC 190
>BC071881-1|AAH71881.1| 239|Homo sapiens tetraspanin 9 protein.
Length = 239
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -2
Query: 442 VRSSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGC 275
+++++ +Q E++CCGV DWY ++ P CC +++ G PL+ TGC
Sbjct: 134 LKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCC-MENSQGCGRNATTPLWRTGC 190
>AK223179-1|BAD96899.1| 239|Homo sapiens tetraspan NET-5 variant
protein.
Length = 239
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -2
Query: 442 VRSSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGC 275
+++++ +Q E++CCGV DWY ++ P CC +++ G PL+ TGC
Sbjct: 134 LKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCC-MENSQGCGRNATTPLWRTGC 190
>AF089749-1|AAC35859.1| 239|Homo sapiens tetraspan NET-5 protein.
Length = 239
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -2
Query: 442 VRSSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGC 275
+++++ +Q E++CCGV DWY ++ P CC +++ G PL+ TGC
Sbjct: 134 LKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCC-MENSQGCGRNATTPLWRTGC 190
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 34.7 bits (76), Expect = 0.42
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Frame = +1
Query: 178 P*TTSPPCRRS*RMLEPTASSHSSVAE*GR------DASNPSGTRENHTFPRAFH*KHVR 339
P TTS C S L T++ H+S + R ++S PS T +HT P F H
Sbjct: 745 PRTTSRGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPS-TITSHTIPPTFPPAH-S 802
Query: 340 STPEDTSFGAYT-NPS*NSLRSTSTRVAWQRKSF 438
STP TS + T NP + +T T+ + + SF
Sbjct: 803 STPPTTSASSTTVNPEAVTTMTTRTKPSTRTTSF 836
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 34.7 bits (76), Expect = 0.42
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Frame = +1
Query: 178 P*TTSPPCRRS*RMLEPTASSHSSVAE*GR------DASNPSGTRENHTFPRAFH*KHVR 339
P TTS C S L T++ H+S + R ++S PS T +HT P F H
Sbjct: 4014 PRTTSRGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPS-TITSHTIPPTFPPAH-S 4071
Query: 340 STPEDTSFGAYT-NPS*NSLRSTSTRVAWQRKSF 438
STP TS + T NP + +T T+ + + SF
Sbjct: 4072 STPPTTSASSTTVNPEAVTTMTTRTKPSTRTTSF 4105
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 34.7 bits (76), Expect = 0.42
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Frame = +1
Query: 178 P*TTSPPCRRS*RMLEPTASSHSSVAE*GR------DASNPSGTRENHTFPRAFH*KHVR 339
P TTS C S L T++ H+S + R ++S PS T +HT P F H
Sbjct: 4014 PRTTSRGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPS-TITSHTIPPTFPPAH-S 4071
Query: 340 STPEDTSFGAYT-NPS*NSLRSTSTRVAWQRKSF 438
STP TS + T NP + +T T+ + + SF
Sbjct: 4072 STPPTTSASSTTVNPEAVTTMTTRTKPSTRTTSF 4105
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 34.7 bits (76), Expect = 0.42
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Frame = +1
Query: 178 P*TTSPPCRRS*RMLEPTASSHSSVAE*GR------DASNPSGTRENHTFPRAFH*KHVR 339
P TTS C S L T++ H+S + R ++S PS T +HT P F H
Sbjct: 550 PRTTSRGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPS-TITSHTIPPTFPPAH-S 607
Query: 340 STPEDTSFGAYT-NPS*NSLRSTSTRVAWQRKSF 438
STP TS + T NP + +T T+ + + SF
Sbjct: 608 STPPTTSASSTTVNPEAVTTMTTRTKPSTRTTSF 641
>DQ323735-1|ABD58927.1| 541|Homo sapiens wntless protein protein.
Length = 541
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 347 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 396
Query: 634 STLV 623
+V
Sbjct: 397 CFMV 400
>BC110826-1|AAI10827.1| 541|Homo sapiens G protein-coupled receptor
177 protein.
Length = 541
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 347 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 396
Query: 634 STLV 623
+V
Sbjct: 397 CFMV 400
>BC007211-1|AAH07211.2| 487|Homo sapiens GPR177 protein protein.
Length = 487
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 293 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 342
Query: 634 STLV 623
+V
Sbjct: 343 CFMV 346
>AY359035-1|AAQ89394.1| 541|Homo sapiens AGAI857 protein.
Length = 541
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 347 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 396
Query: 634 STLV 623
+V
Sbjct: 397 CFMV 400
>AL513284-6|CAI15027.1| 543|Homo sapiens G protein-coupled receptor
177 protein.
Length = 543
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 345 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 394
Query: 634 STLV 623
+V
Sbjct: 395 CFMV 398
>AL513284-4|CAI15024.1| 541|Homo sapiens G protein-coupled receptor
177 protein.
Length = 541
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 347 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 396
Query: 634 STLV 623
+V
Sbjct: 397 CFMV 400
>AL513284-3|CAI15025.1| 450|Homo sapiens G protein-coupled receptor
177 protein.
Length = 450
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 256 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 305
Query: 634 STLV 623
+V
Sbjct: 306 CFMV 309
>AL157407-4|CAI21993.1| 543|Homo sapiens G protein-coupled receptor
177 protein.
Length = 543
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 345 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 394
Query: 634 STLV 623
+V
Sbjct: 395 CFMV 398
>AK074990-1|BAC11339.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ90509 fis, clone NT2RP3004294, weakly similar to
Xenopus laevis ER1 mRNA. ).
Length = 710
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 516 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 565
Query: 634 STLV 623
+V
Sbjct: 566 CFMV 569
>AK074984-1|BAC11333.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ90503 fis, clone NT2RP3004083, highly similar to
Putative NFkB activating protein 373. ).
Length = 541
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 347 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 396
Query: 634 STLV 623
+V
Sbjct: 397 CFMV 400
>AK026744-1|BAB15540.1| 305|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23091 fis, clone LNG07220. ).
Length = 305
Score = 34.3 bits (75), Expect = 0.56
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 FCLHALDSCLAVVPSWADLQRGVCSGCRIY-FWTSDLGVELSSSVLFIAGALLCLPTCWL 635
FCL D C +RGV Y WT+D+G EL+ + + +AG LCL +L
Sbjct: 111 FCLFIFDMC----------ERGVQLTNPFYSIWTTDIGTELAMAFIIVAGICLCLYFLFL 160
Query: 634 STLV 623
+V
Sbjct: 161 CFMV 164
>M60871-1|AAA51951.1| 219|Homo sapiens cell surface antigen
protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 451 DPAVRSSFAAMQLELKCCGVNSNLDWYKHRSSYPPACC 338
D + ++++ ++Q L+CCG+N DW +S PPA C
Sbjct: 128 DNSTKAAWDSIQSFLQCCGINGTSDW----TSGPPASC 161
>M37033-1|AAA35663.1| 219|Homo sapiens CD53 glycoprotein protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 451 DPAVRSSFAAMQLELKCCGVNSNLDWYKHRSSYPPACC 338
D + ++++ ++Q L+CCG+N DW +S PPA C
Sbjct: 128 DNSTKAAWDSIQSFLQCCGINGTSDW----TSGPPASC 161
>CR457108-1|CAG33389.1| 238|Homo sapiens TM4SF7 protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.73
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -2
Query: 436 SSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPA 263
++++ +Q + +CCGV++ DW++ + + P +CC S E G + C
Sbjct: 136 NAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFS-ESCGLHAPGTWWKAPCYETV 194
Query: 262 LIQLRNYVNSLS--ALASAMIVCMAVTLFTAAYTLV 161
+ L+ + ++ L +A++ + +T Y V
Sbjct: 195 KVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQV 230
>BT019643-1|AAV38449.1| 219|Homo sapiens CD53 antigen protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 451 DPAVRSSFAAMQLELKCCGVNSNLDWYKHRSSYPPACC 338
D + ++++ ++Q L+CCG+N DW +S PPA C
Sbjct: 128 DNSTKAAWDSIQSFLQCCGINGTSDW----TSGPPASC 161
>BT006776-1|AAP35422.1| 238|Homo sapiens transmembrane 4
superfamily member 7 protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.73
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -2
Query: 436 SSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPA 263
++++ +Q + +CCGV++ DW++ + + P +CC S E G + C
Sbjct: 136 NAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFS-ESCGLHAPGTWWKAPCYETV 194
Query: 262 LIQLRNYVNSLS--ALASAMIVCMAVTLFTAAYTLV 161
+ L+ + ++ L +A++ + +T Y V
Sbjct: 195 KVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQV 230
>BC093031-1|AAH93031.1| 238|Homo sapiens tetraspanin 4 protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.73
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -2
Query: 436 SSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPA 263
++++ +Q + +CCGV++ DW++ + + P +CC S E G + C
Sbjct: 136 NAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFS-ESCGLHAPGTWWKAPCYETV 194
Query: 262 LIQLRNYVNSLS--ALASAMIVCMAVTLFTAAYTLV 161
+ L+ + ++ L +A++ + +T Y V
Sbjct: 195 KVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQV 230
>BC040693-1|AAH40693.1| 219|Homo sapiens CD53 molecule protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 451 DPAVRSSFAAMQLELKCCGVNSNLDWYKHRSSYPPACC 338
D + ++++ ++Q L+CCG+N DW +S PPA C
Sbjct: 128 DNSTKAAWDSIQSFLQCCGINGTSDW----TSGPPASC 161
>BC019314-1|AAH19314.1| 238|Homo sapiens tetraspanin 4 protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.73
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -2
Query: 436 SSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPA 263
++++ +Q + +CCGV++ DW++ + + P +CC S E G + C
Sbjct: 136 NAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFS-ESCGLHAPGTWWKAPCYETV 194
Query: 262 LIQLRNYVNSLS--ALASAMIVCMAVTLFTAAYTLV 161
+ L+ + ++ L +A++ + +T Y V
Sbjct: 195 KVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQV 230
>BC000389-1|AAH00389.1| 238|Homo sapiens tetraspanin 4 protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.73
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -2
Query: 436 SSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPA 263
++++ +Q + +CCGV++ DW++ + + P +CC S E G + C
Sbjct: 136 NAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFS-ESCGLHAPGTWWKAPCYETV 194
Query: 262 LIQLRNYVNSLS--ALASAMIVCMAVTLFTAAYTLV 161
+ L+ + ++ L +A++ + +T Y V
Sbjct: 195 KVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQV 230
>AL391064-1|CAH73292.1| 219|Homo sapiens CD53 molecule protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 451 DPAVRSSFAAMQLELKCCGVNSNLDWYKHRSSYPPACC 338
D + ++++ ++Q L+CCG+N DW +S PPA C
Sbjct: 128 DNSTKAAWDSIQSFLQCCGINGTSDW----TSGPPASC 161
>AF054841-1|AAC69717.1| 238|Homo sapiens tetraspan TM4SF protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.73
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -2
Query: 436 SSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPA 263
++++ +Q + +CCGV++ DW++ + + P +CC S E G + C
Sbjct: 136 NAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFS-ESCGLHAPGTWWKAPCYETV 194
Query: 262 LIQLRNYVNSLS--ALASAMIVCMAVTLFTAAYTLV 161
+ L+ + ++ L +A++ + +T Y V
Sbjct: 195 KVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQV 230
>AF022813-1|AAC51864.1| 238|Homo sapiens tetraspan protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.73
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -2
Query: 436 SSFAAMQLELKCCGVNSNLDWYK--HRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPA 263
++++ +Q + +CCGV++ DW++ + + P +CC S E G + C
Sbjct: 136 NAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFS-ESCGLHAPGTWWKAPCYETV 194
Query: 262 LIQLRNYVNSLS--ALASAMIVCMAVTLFTAAYTLV 161
+ L+ + ++ L +A++ + +T Y V
Sbjct: 195 KVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQV 230
>AF054838-1|AAC69714.1| 241|Homo sapiens tetraspan TM4SF protein.
Length = 241
Score = 33.5 bits (73), Expect = 0.97
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Frame = -2
Query: 409 LKCCGVNSNLD-----WYKHRSSYPPACCG----RASNEKRGERCDFPLYPTGCLRPALI 257
LKCCG + D ++K S++PP CC +NE E+ GC L
Sbjct: 147 LKCCGFTNYTDFEDSPYFKENSAFPPFCCNDNVTNTANETCTEQKAHDQKVEGCFNQLLY 206
Query: 256 QLRNYVNSLSALASAM 209
+R ++ +A+ +
Sbjct: 207 DIRTNAVTVGGVAAGI 222
>BC011206-1|AAH11206.1| 253|Homo sapiens tetraspanin 3 protein.
Length = 253
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Frame = -2
Query: 421 MQLELKCCGVNS-----NLDWYKH--RSSYPPACCGRASNEKRGERC-DFPLYPTGC 275
+Q +L CCG+++ N DW+K S P +CC ++ G LY GC
Sbjct: 141 VQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGC 197
>BC009248-1|AAH09248.1| 253|Homo sapiens tetraspanin 3 protein.
Length = 253
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Frame = -2
Query: 421 MQLELKCCGVNS-----NLDWYKH--RSSYPPACCGRASNEKRGERC-DFPLYPTGC 275
+Q +L CCG+++ N DW+K S P +CC ++ G LY GC
Sbjct: 141 VQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGC 197
>BC004280-1|AAH04280.1| 253|Homo sapiens tetraspanin 3 protein.
Length = 253
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Frame = -2
Query: 421 MQLELKCCGVNS-----NLDWYKH--RSSYPPACCGRASNEKRGERC-DFPLYPTGC 275
+Q +L CCG+++ N DW+K S P +CC ++ G LY GC
Sbjct: 141 VQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGC 197
>BC000704-1|AAH00704.1| 252|Homo sapiens tetraspanin 3 protein.
Length = 252
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Frame = -2
Query: 421 MQLELKCCGVNS-----NLDWYKH--RSSYPPACCGRASNEKRGERC-DFPLYPTGC 275
+Q +L CCG+++ N DW+K S P +CC ++ G LY GC
Sbjct: 140 VQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGC 196
>AK001326-1|BAA91627.1| 253|Homo sapiens protein ( Homo sapiens
cDNA FLJ10464 fis, clone NT2RP1001546, weakly similar to
PLATELET-ENDOTHELIAL TETRASPAN ANTIGEN 3. ).
Length = 253
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Frame = -2
Query: 421 MQLELKCCGVNS-----NLDWYKH--RSSYPPACCGRASNEKRGERC-DFPLYPTGC 275
+Q +L CCG+++ N DW+K S P +CC ++ G LY GC
Sbjct: 141 VQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGC 197
>AK001310-1|BAA91615.1| 253|Homo sapiens protein ( Homo sapiens
cDNA FLJ10448 fis, clone NT2RP1000856, weakly similar to
PLATELET-ENDOTHELIAL TETRASPAN ANTIGEN 3. ).
Length = 253
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Frame = -2
Query: 421 MQLELKCCGVNS-----NLDWYKH--RSSYPPACCGRASNEKRGERC-DFPLYPTGC 275
+Q +L CCG+++ N DW+K S P +CC ++ G LY GC
Sbjct: 141 VQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGC 197
>AK001305-1|BAA91613.1| 253|Homo sapiens protein ( Homo sapiens
cDNA FLJ10443 fis, clone NT2RP1000782, weakly similar to
PLATELET-ENDOTHELIAL TETRASPAN ANTIGEN 3. ).
Length = 253
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Frame = -2
Query: 421 MQLELKCCGVNS-----NLDWYKH--RSSYPPACCGRASNEKRGERC-DFPLYPTGC 275
+Q +L CCG+++ N DW+K S P +CC ++ G LY GC
Sbjct: 141 VQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGC 197
>AF133423-1|AAF08362.1| 253|Homo sapiens tetraspanin TM4-A protein.
Length = 253
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Frame = -2
Query: 421 MQLELKCCGVNS-----NLDWYKH--RSSYPPACCGRASNEKRGERC-DFPLYPTGC 275
+Q +L CCG+++ N DW+K S P +CC ++ G LY GC
Sbjct: 141 VQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGC 197
>AF054840-1|AAC69716.1| 253|Homo sapiens tetraspan TM4SF protein.
Length = 253
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Frame = -2
Query: 421 MQLELKCCGVNS-----NLDWYKH--RSSYPPACCGRASNEKRGERC-DFPLYPTGC 275
+Q +L CCG+++ N DW+K S P +CC ++ G LY GC
Sbjct: 141 VQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGC 197
>AF189713-1|AAF23374.1| 586|Homo sapiens MLL septin-like fusion
protein MSF-A protein.
Length = 586
Score = 32.7 bits (71), Expect = 1.7
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +3
Query: 621 GTRVDSQQVGR--HSSAPAMKST--LEDSSTPRSEVQK*IRHPEQTPRCRSAQDGTTAKQ 788
GTR S ++ R SS PA+K + +E+ TP S + + QTP R+ +T K
Sbjct: 8 GTRTSSGRLRRLGDSSGPALKRSFEVEEVETPNSTPPRRV----QTPLLRATVASSTQKF 63
Query: 789 ESSACKQNQTTTSHVD 836
+ K ++ + HVD
Sbjct: 64 QDLGVKNSEPSARHVD 79
>BC013404-1|AAH13404.1| 241|Homo sapiens tetraspanin 1 protein.
Length = 241
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -2
Query: 409 LKCCGVNSNLD-----WYKHRSSYPPACCGRASNEKRGERC 302
LKCCG + D ++K S++PP CC E C
Sbjct: 147 LKCCGFTNYTDFEDSPYFKENSAFPPFCCNDNVTNTANETC 187
>BC007290-1|AAH07290.1| 241|Homo sapiens tetraspanin 1 protein.
Length = 241
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -2
Query: 409 LKCCGVNSNLD-----WYKHRSSYPPACCGRASNEKRGERC 302
LKCCG + D ++K S++PP CC E C
Sbjct: 147 LKCCGFTNYTDFEDSPYFKENSAFPPFCCNDNVTNTANETC 187
>AL672043-1|CAH72468.1| 241|Homo sapiens tetraspanin 1 protein.
Length = 241
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -2
Query: 409 LKCCGVNSNLD-----WYKHRSSYPPACCGRASNEKRGERC 302
LKCCG + D ++K S++PP CC E C
Sbjct: 147 LKCCGFTNYTDFEDSPYFKENSAFPPFCCNDNVTNTANETC 187
>AF133425-1|AAF08364.1| 241|Homo sapiens tetraspanin TM4-C protein.
Length = 241
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -2
Query: 409 LKCCGVNSNLD-----WYKHRSSYPPACCGRASNEKRGERC 302
LKCCG + D ++K S++PP CC E C
Sbjct: 147 LKCCGFTNYTDFEDSPYFKENSAFPPFCCNDNVTNTANETC 187
>AF065388-1|AAC17119.1| 241|Homo sapiens tetraspan NET-1 protein.
Length = 241
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -2
Query: 409 LKCCGVNSNLD-----WYKHRSSYPPACCGRASNEKRGERC 302
LKCCG + D ++K S++PP CC E C
Sbjct: 147 LKCCGFTNYTDFEDSPYFKENSAFPPFCCNDNVTNTANETC 187
>CR457084-1|CAG33365.1| 260|Homo sapiens UPK1B protein.
Length = 260
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 442 VRSSFAAMQLELKCCGVNSNLDWYKHRSSY 353
V ++ + L+ CCGVN DW K+ S++
Sbjct: 146 VTKTWDRLMLQDNCCGVNGPSDWQKYTSAF 175
>BC063568-1|AAH63568.1| 260|Homo sapiens uroplakin 1B protein.
Length = 260
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 442 VRSSFAAMQLELKCCGVNSNLDWYKHRSSY 353
V ++ + L+ CCGVN DW K+ S++
Sbjct: 146 VTKTWDRLMLQDNCCGVNGPSDWQKYTSAF 175
>AF082888-1|AAD09401.1| 242|Homo sapiens uroplakin IB protein.
Length = 242
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 442 VRSSFAAMQLELKCCGVNSNLDWYKHRSSY 353
V ++ + L+ CCGVN DW K+ S++
Sbjct: 136 VTKTWDRLMLQDNCCGVNGPSDWQKYTSAF 165
>AF042331-1|AAC77794.1| 260|Homo sapiens uroplakin 1B protein.
Length = 260
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 442 VRSSFAAMQLELKCCGVNSNLDWYKHRSSY 353
V ++ + L+ CCGVN DW K+ S++
Sbjct: 146 VTKTWDRLMLQDNCCGVNGPSDWQKYTSAF 175
>AB015234-1|BAA33724.1| 260|Homo sapiens uroplakin 1b protein.
Length = 260
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 442 VRSSFAAMQLELKCCGVNSNLDWYKHRSSY 353
V ++ + L+ CCGVN DW K+ S++
Sbjct: 146 VTKTWDRLMLQDNCCGVNGPSDWQKYTSAF 175
>AB002155-1|BAA88878.1| 260|Homo sapiens human uroplakin Ib
protein.
Length = 260
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 442 VRSSFAAMQLELKCCGVNSNLDWYKHRSSY 353
V ++ + L+ CCGVN DW K+ S++
Sbjct: 146 VTKTWDRLMLQDNCCGVNGPSDWQKYTSAF 175
>M35252-1|AAA35709.1| 237|Homo sapiens protein ( Human CO-029. ).
Length = 237
Score = 30.3 bits (65), Expect = 9.0
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 439 RSSFAAMQLELKCCG-VNSNLDWYKHRSSYPPAC 341
+ + Q E KCCG VN DW + YP C
Sbjct: 139 QEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELC 172
>BC107098-1|AAI07099.1| 258|Homo sapiens uroplakin 1A protein.
Length = 258
Score = 30.3 bits (65), Expect = 9.0
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 18/106 (16%)
Frame = -2
Query: 421 MQLELKCCGVNSNLDWYKHRSSY-----------PPACCGRASN----EKRGER---CDF 296
+ +E +CCG + +DW S++ PP CC R N + G R D+
Sbjct: 153 VMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFIPLNEEGCRLGHMDY 212
Query: 295 PLYPTGCLRPALIQLRNYVNSLSALASAMIVCMAVTLFTAAYTLVT 158
L+ GC + +Y +S A+++ + A Y T
Sbjct: 213 -LFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTT 257
>BC031265-1|AAH31265.1| 305|Homo sapiens tetraspanin 12 protein.
Length = 305
Score = 30.3 bits (65), Expect = 9.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = -2
Query: 418 QLELKCCGVNSNLDWYK-HRSSYPP-ACCGR--ASNEKRGERCDF-PLYPTGC 275
Q E KCCGV DW + +PP +CC R K+ + D LY GC
Sbjct: 154 QREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHQEDLSDLYQEGC 206
>BC005246-1|AAH05246.1| 237|Homo sapiens tetraspanin 8 protein.
Length = 237
Score = 30.3 bits (65), Expect = 9.0
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 439 RSSFAAMQLELKCCG-VNSNLDWYKHRSSYPPAC 341
+ + Q E KCCG VN DW + YP C
Sbjct: 139 QEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELC 172
>AY358703-1|AAQ89066.1| 305|Homo sapiens NET-2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 9.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = -2
Query: 418 QLELKCCGVNSNLDWYK-HRSSYPP-ACCGR--ASNEKRGERCDF-PLYPTGC 275
Q E KCCGV DW + +PP +CC R K+ + D LY GC
Sbjct: 154 QREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHQEDLSDLYQEGC 206
>AK223022-1|BAD96742.1| 237|Homo sapiens transmembrane 4
superfamily member 3 variant protein.
Length = 237
Score = 30.3 bits (65), Expect = 9.0
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 439 RSSFAAMQLELKCCG-VNSNLDWYKHRSSYPPAC 341
+ + Q E KCCG VN DW + YP C
Sbjct: 139 QEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELC 172
>AF124522-1|AAD17317.1| 305|Homo sapiens tetraspan NET-2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 9.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = -2
Query: 418 QLELKCCGVNSNLDWYK-HRSSYPP-ACCGR--ASNEKRGERCDF-PLYPTGC 275
Q E KCCGV DW + +PP +CC R K+ + D LY GC
Sbjct: 154 QREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHQEDLSDLYQEGC 206
>AC004456-1|AAQ96879.1| 305|Homo sapiens unknown protein.
Length = 305
Score = 30.3 bits (65), Expect = 9.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = -2
Query: 418 QLELKCCGVNSNLDWYK-HRSSYPP-ACCGR--ASNEKRGERCDF-PLYPTGC 275
Q E KCCGV DW + +PP +CC R K+ + D LY GC
Sbjct: 154 QREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAHQEDLSDLYQEGC 206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,171,886
Number of Sequences: 237096
Number of extensions: 2803786
Number of successful extensions: 11920
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 11377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11905
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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