Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10b21
(836 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060649-1|AAL28197.1| 217|Drosophila melanogaster GH07902p pro... 44 2e-04
AE013599-3712|AAF47085.1| 286|Drosophila melanogaster CG11303-P... 44 2e-04
AB010263-1|BAA32691.1| 286|Drosophila melanogaster TM4SF protein. 44 2e-04
AB010261-3|BAA32686.1| 286|Drosophila melanogaster TM4SF protein. 44 2e-04
AY071260-1|AAL48882.1| 236|Drosophila melanogaster RE29825p pro... 40 0.004
AE014296-2985|AAF49286.1| 236|Drosophila melanogaster CG5492-PB... 40 0.004
AE014296-2984|AAN11686.1| 236|Drosophila melanogaster CG5492-PA... 40 0.004
BT010223-1|AAQ23541.1| 235|Drosophila melanogaster RE72862p pro... 39 0.007
AE014134-3391|AAF53992.2| 245|Drosophila melanogaster CG8666-PA... 39 0.007
AY122216-1|AAM52728.1| 308|Drosophila melanogaster LP09584p pro... 38 0.023
AY069049-1|AAL39194.1| 226|Drosophila melanogaster GH05668p pro... 38 0.023
AF274014-1|AAF90140.1| 226|Drosophila melanogaster tetraspanin ... 38 0.023
AF274012-1|AAF90138.1| 308|Drosophila melanogaster tetraspanin ... 38 0.023
AE014134-1574|AAN10683.1| 308|Drosophila melanogaster CG9496-PB... 38 0.023
AE014134-1573|AAF52720.1| 308|Drosophila melanogaster CG9496-PA... 38 0.023
AE013599-275|AAF57420.2| 226|Drosophila melanogaster CG18817-PC... 38 0.023
AE013599-274|AAG22210.2| 226|Drosophila melanogaster CG18817-PB... 38 0.023
AE013599-273|AAG22311.2| 226|Drosophila melanogaster CG18817-PA... 38 0.023
AE014298-839|AAF46118.3| 282|Drosophila melanogaster CG4690-PA ... 34 0.28
AY075454-1|AAL68267.1| 228|Drosophila melanogaster RE12209p pro... 33 0.48
AF220043-1|AAF23827.1| 228|Drosophila melanogaster tetraspanin ... 33 0.48
AE013599-281|AAF59311.1| 228|Drosophila melanogaster CG10106-PA... 33 0.48
AY119159-1|AAM51019.1| 283|Drosophila melanogaster RH08414p pro... 32 0.85
AY070990-1|AAL48612.1| 229|Drosophila melanogaster RE08220p pro... 32 1.1
AF274018-1|AAF90144.1| 229|Drosophila melanogaster tetraspanin ... 32 1.1
AE013599-287|AAF59307.2| 229|Drosophila melanogaster CG12843-PA... 32 1.1
AY102700-1|AAM27529.1| 227|Drosophila melanogaster SD10395p pro... 31 2.6
AF220042-1|AAF23826.1| 227|Drosophila melanogaster tetraspanin ... 31 2.6
AE013599-280|AAF59312.3| 227|Drosophila melanogaster CG12846-PA... 31 2.6
AE013599-1296|AAF58649.1| 225|Drosophila melanogaster CG9033-PA... 29 6.0
AE013599-1295|AAM68735.1| 239|Drosophila melanogaster CG9033-PB... 29 6.0
AE013599-286|AAM68906.1| 189|Drosophila melanogaster CG12844-PC... 29 6.0
AE013599-285|AAM68905.1| 189|Drosophila melanogaster CG12844-PA... 29 6.0
AE013599-284|AAF59308.2| 231|Drosophila melanogaster CG12844-PB... 29 6.0
>AY060649-1|AAL28197.1| 217|Drosophila melanogaster GH07902p
protein.
Length = 217
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = -2
Query: 421 MQLELKCCGVNSNLDWYKHRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPALIQLRNY 242
MQ +L+CCGV+ LD+ R S P +CC R + CD Y GCL Q+RN
Sbjct: 75 MQSQLQCCGVDGPLDY--RRLSLPWSCCSRPEHAYE-SACD-THYKRGCLAVVSEQIRNR 130
Query: 241 VNSLSALASAMIVCMAVTLFTAAYTLV 161
+ + A+ + + ++ +F A + +
Sbjct: 131 LLITAFGAAIIAIFQSLGIFCAVHLTI 157
>AE013599-3712|AAF47085.1| 286|Drosophila melanogaster CG11303-PA,
isoform A protein.
Length = 286
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = -2
Query: 421 MQLELKCCGVNSNLDWYKHRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPALIQLRNY 242
MQ +L+CCGV+ LD+ R S P +CC R + CD Y GCL Q+RN
Sbjct: 144 MQSQLQCCGVDGPLDY--RRLSLPWSCCSRPEHAYE-SACD-THYKRGCLAVVSEQIRNR 199
Query: 241 VNSLSALASAMIVCMAVTLFTAAYTLV 161
+ + A+ + + ++ +F A + +
Sbjct: 200 LLITAFGAAIIAIFQSLGIFCAVHLTI 226
>AB010263-1|BAA32691.1| 286|Drosophila melanogaster TM4SF protein.
Length = 286
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = -2
Query: 421 MQLELKCCGVNSNLDWYKHRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPALIQLRNY 242
MQ +L+CCGV+ LD+ R S P +CC R + CD Y GCL Q+RN
Sbjct: 144 MQSQLQCCGVDGPLDY--RRLSLPWSCCSRPEHAYE-SACD-THYKRGCLAVVSEQIRNR 199
Query: 241 VNSLSALASAMIVCMAVTLFTAAYTLV 161
+ + A+ + + ++ +F A + +
Sbjct: 200 LLITAFGAAIIAIFQSLGIFCAVHLTI 226
>AB010261-3|BAA32686.1| 286|Drosophila melanogaster TM4SF protein.
Length = 286
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = -2
Query: 421 MQLELKCCGVNSNLDWYKHRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPALIQLRNY 242
MQ +L+CCGV+ LD+ R S P +CC R + CD Y GCL Q+RN
Sbjct: 144 MQSQLQCCGVDGPLDY--RRLSLPWSCCSRPEHAYE-SACD-THYKRGCLAVVSEQIRNR 199
Query: 241 VNSLSALASAMIVCMAVTLFTAAYTLV 161
+ + A+ + + ++ +F A + +
Sbjct: 200 LLITAFGAAIIAIFQSLGIFCAVHLTI 226
>AY071260-1|AAL48882.1| 236|Drosophila melanogaster RE29825p
protein.
Length = 236
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Frame = -2
Query: 508 REPAALNASMAQAMMLDAIDPAVRSSFAAMQLELKCCGVNSNLDWYKHRSSYPPACCGRA 329
R + M M L + ++ Q L+CCGV++ DW ++ P +CC
Sbjct: 115 RVQQTMRQEMRSTMALYGSRREITQAWDLTQERLQCCGVDTWHDWNRY-GPVPESCCQEL 173
Query: 328 SNEKRGERCDFP----LYPTGCLRPALIQLRNYVNSLSALASAMIVCM 197
+R E FP LY GCL +R++ + + A+ + M
Sbjct: 174 FGGQRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILM 221
>AE014296-2985|AAF49286.1| 236|Drosophila melanogaster CG5492-PB,
isoform B protein.
Length = 236
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Frame = -2
Query: 508 REPAALNASMAQAMMLDAIDPAVRSSFAAMQLELKCCGVNSNLDWYKHRSSYPPACCGRA 329
R + M M L + ++ Q L+CCGV++ DW ++ P +CC
Sbjct: 115 RVQQTMRQEMRSTMALYGSRREITQAWDLTQERLQCCGVDTWHDWNRY-GPVPESCCQEL 173
Query: 328 SNEKRGERCDFP----LYPTGCLRPALIQLRNYVNSLSALASAMIVCM 197
+R E FP LY GCL +R++ + + A+ + M
Sbjct: 174 FGGQRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILM 221
>AE014296-2984|AAN11686.1| 236|Drosophila melanogaster CG5492-PA,
isoform A protein.
Length = 236
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Frame = -2
Query: 508 REPAALNASMAQAMMLDAIDPAVRSSFAAMQLELKCCGVNSNLDWYKHRSSYPPACCGRA 329
R + M M L + ++ Q L+CCGV++ DW ++ P +CC
Sbjct: 115 RVQQTMRQEMRSTMALYGSRREITQAWDLTQERLQCCGVDTWHDWNRY-GPVPESCCQEL 173
Query: 328 SNEKRGERCDFP----LYPTGCLRPALIQLRNYVNSLSALASAMIVCM 197
+R E FP LY GCL +R++ + + A+ + M
Sbjct: 174 FGGQRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILM 221
>BT010223-1|AAQ23541.1| 235|Drosophila melanogaster RE72862p
protein.
Length = 235
Score = 39.1 bits (87), Expect = 0.007
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -2
Query: 439 RSSFAAMQLELKCCGVNSNLDW--YKHRSSYPPACCGRASNEKRGERCDFPLYPTGCLRP 266
R ++ +Q EL CCG+N DW S+ P ACC + + E + GCL+
Sbjct: 132 RDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHATQHGCLQK 191
Query: 265 AL 260
L
Sbjct: 192 LL 193
>AE014134-3391|AAF53992.2| 245|Drosophila melanogaster CG8666-PA
protein.
Length = 245
Score = 39.1 bits (87), Expect = 0.007
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -2
Query: 439 RSSFAAMQLELKCCGVNSNLDW--YKHRSSYPPACCGRASNEKRGERCDFPLYPTGCLRP 266
R ++ +Q EL CCG+N DW S+ P ACC + + E + GCL+
Sbjct: 132 RDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHATQHGCLQK 191
Query: 265 AL 260
L
Sbjct: 192 LL 193
>AY122216-1|AAM52728.1| 308|Drosophila melanogaster LP09584p
protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.023
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Frame = -2
Query: 484 SMAQAMMLDAIDPAVRSSFAAMQLELKCCGVNSNLDWYKHRSS------------YPPAC 341
+M QA+ DP V S MQ L+CCGVN DW + S+ P +C
Sbjct: 123 TMNQALAEYEHDPYVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSC 182
Query: 340 CGR---ASNEKRGERCDFPLYPTGCLRPALIQLRNYVNSLSALASAMIVCMAVTLFTAAY 170
CG + N+ C Y GC R N++ S SAM++ T T A+
Sbjct: 183 CGNQPTSLNDSTQMTC-METYDYGCFRK-----MNFIVS----QSAMLIATGAT--TVAF 230
Query: 169 TLVTGVV 149
+ GV+
Sbjct: 231 VQLLGVL 237
>AY069049-1|AAL39194.1| 226|Drosophila melanogaster GH05668p
protein.
Length = 226
Score = 37.5 bits (83), Expect = 0.023
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 424 AMQLELKCCGVNSNLDWYKHRSSYPPACCGRASN 323
A+Q+ +KCCG + D Y ++ +PP+CC +N
Sbjct: 134 AIQISMKCCGRSGYTD-YAYQGKFPPSCCSDTNN 166
>AF274014-1|AAF90140.1| 226|Drosophila melanogaster tetraspanin
42Ea protein.
Length = 226
Score = 37.5 bits (83), Expect = 0.023
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 424 AMQLELKCCGVNSNLDWYKHRSSYPPACCGRASN 323
A+Q+ +KCCG + D Y ++ +PP+CC +N
Sbjct: 134 AIQISMKCCGRSGYTD-YAYQGKFPPSCCSDTNN 166
>AF274012-1|AAF90138.1| 308|Drosophila melanogaster tetraspanin
29Fb protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.023
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Frame = -2
Query: 484 SMAQAMMLDAIDPAVRSSFAAMQLELKCCGVNSNLDWYKHRSS------------YPPAC 341
+M QA+ DP V S MQ L+CCGVN DW + S+ P +C
Sbjct: 123 TMNQALAEYEHDPYVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSC 182
Query: 340 CGR---ASNEKRGERCDFPLYPTGCLRPALIQLRNYVNSLSALASAMIVCMAVTLFTAAY 170
CG + N+ C Y GC R N++ S SAM++ T T A+
Sbjct: 183 CGNQPTSLNDSTQMTC-METYDYGCFRK-----MNFIVS----QSAMLIATGAT--TVAF 230
Query: 169 TLVTGVV 149
+ GV+
Sbjct: 231 VQLLGVL 237
>AE014134-1574|AAN10683.1| 308|Drosophila melanogaster CG9496-PB,
isoform B protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.023
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Frame = -2
Query: 484 SMAQAMMLDAIDPAVRSSFAAMQLELKCCGVNSNLDWYKHRSS------------YPPAC 341
+M QA+ DP V S MQ L+CCGVN DW + S+ P +C
Sbjct: 123 TMNQALAEYEHDPYVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSC 182
Query: 340 CGR---ASNEKRGERCDFPLYPTGCLRPALIQLRNYVNSLSALASAMIVCMAVTLFTAAY 170
CG + N+ C Y GC R N++ S SAM++ T T A+
Sbjct: 183 CGNQPTSLNDSTQMTC-METYDYGCFRK-----MNFIVS----QSAMLIATGAT--TVAF 230
Query: 169 TLVTGVV 149
+ GV+
Sbjct: 231 VQLLGVL 237
>AE014134-1573|AAF52720.1| 308|Drosophila melanogaster CG9496-PA,
isoform A protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.023
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Frame = -2
Query: 484 SMAQAMMLDAIDPAVRSSFAAMQLELKCCGVNSNLDWYKHRSS------------YPPAC 341
+M QA+ DP V S MQ L+CCGVN DW + S+ P +C
Sbjct: 123 TMNQALAEYEHDPYVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSC 182
Query: 340 CGR---ASNEKRGERCDFPLYPTGCLRPALIQLRNYVNSLSALASAMIVCMAVTLFTAAY 170
CG + N+ C Y GC R N++ S SAM++ T T A+
Sbjct: 183 CGNQPTSLNDSTQMTC-METYDYGCFRK-----MNFIVS----QSAMLIATGAT--TVAF 230
Query: 169 TLVTGVV 149
+ GV+
Sbjct: 231 VQLLGVL 237
>AE013599-275|AAF57420.2| 226|Drosophila melanogaster CG18817-PC,
isoform C protein.
Length = 226
Score = 37.5 bits (83), Expect = 0.023
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 424 AMQLELKCCGVNSNLDWYKHRSSYPPACCGRASN 323
A+Q+ +KCCG + D Y ++ +PP+CC +N
Sbjct: 134 AIQISMKCCGRSGYTD-YAYQGKFPPSCCSDTNN 166
>AE013599-274|AAG22210.2| 226|Drosophila melanogaster CG18817-PB,
isoform B protein.
Length = 226
Score = 37.5 bits (83), Expect = 0.023
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 424 AMQLELKCCGVNSNLDWYKHRSSYPPACCGRASN 323
A+Q+ +KCCG + D Y ++ +PP+CC +N
Sbjct: 134 AIQISMKCCGRSGYTD-YAYQGKFPPSCCSDTNN 166
>AE013599-273|AAG22311.2| 226|Drosophila melanogaster CG18817-PA,
isoform A protein.
Length = 226
Score = 37.5 bits (83), Expect = 0.023
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 424 AMQLELKCCGVNSNLDWYKHRSSYPPACCGRASN 323
A+Q+ +KCCG + D Y ++ +PP+CC +N
Sbjct: 134 AIQISMKCCGRSGYTD-YAYQGKFPPSCCSDTNN 166
>AE014298-839|AAF46118.3| 282|Drosophila melanogaster CG4690-PA
protein.
Length = 282
Score = 33.9 bits (74), Expect = 0.28
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = -2
Query: 454 IDPAVRSSFAAMQLELKCCGVNSNLDWY-----KHRSSYPPACC 338
+ P+V S + ++Q +CCGV+S DWY R P +CC
Sbjct: 135 VAPSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCC 178
>AY075454-1|AAL68267.1| 228|Drosophila melanogaster RE12209p
protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.48
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 430 FAAMQLELKCCGVNSNLDWYKHRSSYPPACC 338
F +Q L CCG +S LD+ PP+CC
Sbjct: 135 FDTIQKSLHCCGSSSALDYIGKGDLVPPSCC 165
>AF220043-1|AAF23827.1| 228|Drosophila melanogaster tetraspanin
protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.48
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 430 FAAMQLELKCCGVNSNLDWYKHRSSYPPACC 338
F +Q L CCG +S LD+ PP+CC
Sbjct: 135 FDTIQKSLHCCGSSSALDYIGKGDLVPPSCC 165
>AE013599-281|AAF59311.1| 228|Drosophila melanogaster CG10106-PA
protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.48
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 430 FAAMQLELKCCGVNSNLDWYKHRSSYPPACC 338
F +Q L CCG +S LD+ PP+CC
Sbjct: 135 FDTIQKSLHCCGSSSALDYIGKGDLVPPSCC 165
>AY119159-1|AAM51019.1| 283|Drosophila melanogaster RH08414p
protein.
Length = 283
Score = 32.3 bits (70), Expect = 0.85
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = -2
Query: 454 IDPAVRSSFAAMQLELKCCGVNSNLDWY-----KHRSSYPPACC 338
+ P+V S + +++ +CCGV+S DWY R P +CC
Sbjct: 136 VAPSVASIWDSVKQSFECCGVSSYEDWYDIQSWPGRRWVPESCC 179
>AY070990-1|AAL48612.1| 229|Drosophila melanogaster RE08220p
protein.
Length = 229
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 409 LKCCGVNSNLDWYKHRSSYPPACCGRASNEKRGERCDFPLYPTGC 275
L+CCGVNS+ D++ P +CC + R ++ TGC
Sbjct: 137 LQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSR----VFKTGC 177
>AF274018-1|AAF90144.1| 229|Drosophila melanogaster tetraspanin
42Ei protein.
Length = 229
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 409 LKCCGVNSNLDWYKHRSSYPPACCGRASNEKRGERCDFPLYPTGC 275
L+CCGVNS+ D++ P +CC + R ++ TGC
Sbjct: 137 LQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSR----VFKTGC 177
>AE013599-287|AAF59307.2| 229|Drosophila melanogaster CG12843-PA
protein.
Length = 229
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 409 LKCCGVNSNLDWYKHRSSYPPACCGRASNEKRGERCDFPLYPTGC 275
L+CCGVNS+ D++ P +CC + R ++ TGC
Sbjct: 137 LQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSR----VFKTGC 177
>AY102700-1|AAM27529.1| 227|Drosophila melanogaster SD10395p
protein.
Length = 227
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 421 MQLELKCCGVNSNLDWYKHRSSYPPACCGRASN 323
+Q KCCG+N D + +YP +CC SN
Sbjct: 135 LQRSFKCCGLNGFAD---YGITYPASCCDSPSN 164
>AF220042-1|AAF23826.1| 227|Drosophila melanogaster tetraspanin
protein.
Length = 227
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 421 MQLELKCCGVNSNLDWYKHRSSYPPACCGRASN 323
+Q KCCG+N D + +YP +CC SN
Sbjct: 135 LQRSFKCCGLNGFAD---YGITYPASCCDSPSN 164
>AE013599-280|AAF59312.3| 227|Drosophila melanogaster CG12846-PA
protein.
Length = 227
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 421 MQLELKCCGVNSNLDWYKHRSSYPPACCGRASN 323
+Q KCCG+N D + +YP +CC SN
Sbjct: 135 LQRSFKCCGLNGFAD---YGITYPASCCDSPSN 164
>AE013599-1296|AAF58649.1| 225|Drosophila melanogaster CG9033-PA,
isoform A protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 421 MQLELKCCGVNSNLDW--YKHRSSYPPACC 338
+Q +L CCGV+S DW + P +CC
Sbjct: 122 IQQKLMCCGVDSPADWRTLSANKTLPGSCC 151
>AE013599-1295|AAM68735.1| 239|Drosophila melanogaster CG9033-PB,
isoform B protein.
Length = 239
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 421 MQLELKCCGVNSNLDW--YKHRSSYPPACC 338
+Q +L CCGV+S DW + P +CC
Sbjct: 136 IQQKLMCCGVDSPADWRTLSANKTLPGSCC 165
>AE013599-286|AAM68906.1| 189|Drosophila melanogaster CG12844-PC,
isoform C protein.
Length = 189
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = -2
Query: 409 LKCCGVNSNLDWYKHRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPALIQLRNYVNSL 230
L CCG NS D+ PP+CC K L+ TGC ++ + YV +
Sbjct: 99 LHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKH-----LNLFMTGC----EVKFKEYVGAK 149
Query: 229 SALASAMIVCMAVTLFTAAYT 167
+A ++ + + F + T
Sbjct: 150 TANFHSLSWFLVIFEFAGSVT 170
>AE013599-285|AAM68905.1| 189|Drosophila melanogaster CG12844-PA,
isoform A protein.
Length = 189
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = -2
Query: 409 LKCCGVNSNLDWYKHRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPALIQLRNYVNSL 230
L CCG NS D+ PP+CC K L+ TGC ++ + YV +
Sbjct: 99 LHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKH-----LNLFMTGC----EVKFKEYVGAK 149
Query: 229 SALASAMIVCMAVTLFTAAYT 167
+A ++ + + F + T
Sbjct: 150 TANFHSLSWFLVIFEFAGSVT 170
>AE013599-284|AAF59308.2| 231|Drosophila melanogaster CG12844-PB,
isoform B protein.
Length = 231
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = -2
Query: 409 LKCCGVNSNLDWYKHRSSYPPACCGRASNEKRGERCDFPLYPTGCLRPALIQLRNYVNSL 230
L CCG NS D+ PP+CC K L+ TGC ++ + YV +
Sbjct: 141 LHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKH-----LNLFMTGC----EVKFKEYVGAK 191
Query: 229 SALASAMIVCMAVTLFTAAYT 167
+A ++ + + F + T
Sbjct: 192 TANFHSLSWFLVIFEFAGSVT 212
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,998,410
Number of Sequences: 53049
Number of extensions: 887979
Number of successful extensions: 2772
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2762
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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