Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10b12
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 291 5e-79
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 261 4e-70
AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa hy... 133 2e-31
U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa hydra... 105 5e-23
Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical p... 104 8e-23
U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical pr... 101 6e-22
AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical... 100 1e-21
Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical pr... 97 1e-20
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 91 8e-19
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 91 8e-19
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 91 8e-19
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 90 2e-18
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 63 3e-10
U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical p... 58 1e-08
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 33 0.24
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 33 0.24
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 33 0.24
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 33 0.24
Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 1.3
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 1.3
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75531-9|CAA99802.1| 277|Caenorhabditis elegans Hypothetical pr... 29 3.9
AY728060-1|AAU43721.1| 277|Caenorhabditis elegans cadmium-induc... 29 3.9
Z77133-2|CAB00864.2| 664|Caenorhabditis elegans Hypothetical pr... 29 5.1
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 28 6.7
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 28 6.7
Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 291 bits (713), Expect = 5e-79
Identities = 135/219 (61%), Positives = 172/219 (78%)
Frame = -3
Query: 796 AVNDFDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPII 617
A+ D D ++ AI+ITG+E+AFAAGADIKEM NN +++ FL W +S+ KP+I
Sbjct: 70 ALEVLDTDKSVGAIVITGSERAFAAGADIKEMTNNEFATTFSGSFLSNWTAVSDVKKPVI 129
Query: 616 AAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEI 437
AAVNGFALGGG ELAM+CDIIYAGEKA+FGQPEINIGTIPGAGGTQR R GKS AME+
Sbjct: 130 AAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSFAMEV 189
Query: 436 VLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETT 257
LTGN A EA++ G+VSK+FP ++++ E +KL E+I SPLIV++AK+AVN+AYE T
Sbjct: 190 CLTGNHVTAQEAKEHGIVSKIFPADQVVGEAVKLGEKIADQSPLIVQMAKEAVNKAYELT 249
Query: 256 LKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKNE 140
L+ GL FE+ F+ TFAT+DRKEGMTAF EKR P ++++
Sbjct: 250 LQEGLHFERRLFHATFATKDRKEGMTAFAEKRKPQWESK 288
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 261 bits (640), Expect = 4e-70
Identities = 123/211 (58%), Positives = 158/211 (74%)
Frame = -3
Query: 781 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNG 602
+ D + I++TG+EKAFAAGADIKEM ++ + + W+ +S+ KP+IAAVNG
Sbjct: 43 EKDQSYHVIVLTGSEKAFAAGADIKEMAKLEFADVFENDYFTNWDTLSHITKPVIAAVNG 102
Query: 601 FALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGN 422
FALGGG ELA++CDI+YAGE A FGQPEI IGTIPG GGTQR PRYV KS AMEI L+G+
Sbjct: 103 FALGGGTELALMCDIVYAGENAIFGQPEITIGTIPGLGGTQRWPRYVSKSVAMEICLSGD 162
Query: 421 FFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGL 242
A EA++ GLVSKVFPV++L+ E + LA+RI +SPLIVK K+++N AY+T+L GL
Sbjct: 163 RLGAQEAKEDGLVSKVFPVQQLVGEAVLLADRIAKNSPLIVKTVKRSLNSAYQTSLNQGL 222
Query: 241 QFEKSTFYGTFATEDRKEGMTAFVEKRPPNF 149
+ EK F TFAT DR+EGM+AF EKR P +
Sbjct: 223 EMEKQLFQSTFATNDRREGMSAFAEKRAPKW 253
>AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa
hydratase protein 5 protein.
Length = 284
Score = 133 bits (321), Expect = 2e-31
Identities = 70/194 (36%), Positives = 111/194 (57%), Gaps = 3/194 (1%)
Frame = -3
Query: 793 VNDFDADSNIAAIIITGN-EKAFAAGADIKEMQNNTYSSNTK--QGFLREWEDISNCGKP 623
+++ D +I+ + F +GAD+KE + + T+ G + D+ +P
Sbjct: 68 LDELKYDPKTRVVILNSKCDNVFCSGADLKERKTMSQQEATRFVNGLRDSFTDVERLPQP 127
Query: 622 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAM 443
+IAA++GFALGGG ELA+ CDI A +KAK G E IPGAGG+QRL R VG +KA
Sbjct: 128 VIAAIDGFALGGGLELALACDIRVASQKAKMGLVETKWALIPGAGGSQRLYRIVGVAKAK 187
Query: 442 EIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYE 263
E++ T + +A K+G+V+ V +E+++++A +I P+ VKLAK A+N +
Sbjct: 188 ELIYTAEVLNGADAAKLGVVNHVVEANP-IEKSLEIARKIIPRGPIAVKLAKLAINLGSQ 246
Query: 262 TTLKSGLQFEKSTF 221
T + S L E+ +
Sbjct: 247 TDITSALSVEQQCY 260
>U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa
hydratase protein 3 protein.
Length = 258
Score = 105 bits (251), Expect = 5e-23
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Frame = -3
Query: 796 AVNDFDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWE----DISNCG 629
A F+ DS + ++ G F AG D++ + + + F ++ I
Sbjct: 40 AFEKFNEDSTMKTAVLYGEGGTFCAGYDLESVSKAEHQE-VSEDFCDKYRYMGPSIMKIK 98
Query: 628 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 449
KP+IAA+ GFA+ GG EL+++ D+ + AKFG +G GGT RLPR +G +
Sbjct: 99 KPLIAAIEGFAVAGGLELSLMADLRVSSPSAKFGVFCRRVGVPLIDGGTVRLPRVIGLGR 158
Query: 448 AMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQA 269
A++++LTG A EA + GLV+++ K +EE +KL + I +H + + +++ +
Sbjct: 159 ALDMILTGREVGAQEALQWGLVNRISDEGKAVEEAVKLGKLIASHPEICMLADRESTYYS 218
Query: 268 YETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKR 161
E T ++E F T + +G F+EK+
Sbjct: 219 LEHTEHESFEYE---FGSTKVLAESIKGAQQFMEKQ 251
>Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical
protein F38H4.8 protein.
Length = 283
Score = 104 bits (249), Expect = 8e-23
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 3/216 (1%)
Frame = -3
Query: 781 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLR---EWEDISNCGKPIIAA 611
D + ++II N K+F+AG ++KE+ + S + F I N P+IA
Sbjct: 58 DKIEKVRSVIIAHNGKSFSAGHELKELTTESGSDKHNEIFNTCGDMMNFIRNMKVPVIAE 117
Query: 610 VNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVL 431
VNG A G +L CD++ AG+ +KF P +G G L R V + AM+++L
Sbjct: 118 VNGTAAAAGLQLVASCDVVVAGKSSKFLVPGQKLGLFCSTPGIA-LVRAVPRKVAMDMLL 176
Query: 430 TGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLK 251
T D+ A + GLVS+V +++ E + +AE+IG S + L K E +
Sbjct: 177 TAQPIDSEAALRSGLVSRVVEDDQVKFEALNVAEQIGHFSRSVTALGKAFFYTQAELSTV 236
Query: 250 SGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKN 143
++ G +D +EG++AF+ KRP +F++
Sbjct: 237 DAYRYGSRVMVGNLKLKDCQEGISAFIGKRPADFEH 272
>U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical
protein F58A6.1 protein.
Length = 278
Score = 101 bits (242), Expect = 6e-22
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 14/222 (6%)
Frame = -3
Query: 781 DADSNIAAIIITGNEKAFAAGADIKE---MQNNTYSSNTKQG--------FL-REWEDIS 638
D D +I+ G K F +G D+ E + + ++G F+ +++ I
Sbjct: 50 DEDPECRVVILQGEGKHFCSGLDLSEVTFLNGEEADDSARRGRSILRTIKFMQKQFTYID 109
Query: 637 NCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVG 458
C KP+I A++G+ LG ++A CD+ A + A E++IG G RLP+ VG
Sbjct: 110 ECSKPVILAMHGYCLGAALDIATACDVRVATKDAVLSVKEVDIGMAADVGTLNRLPKIVG 169
Query: 457 K-SKAMEIVLTGNFFDAHEAEKMGLVSKVFPV-EKLLEETIKLAERIGTHSPLIVKLAKQ 284
S +I L+ F A EA + GL+S+V+ E+++ E +K+A+ I SP+ V+ K
Sbjct: 170 NHSWIKDISLSARHFSAGEALQFGLLSRVYDTREEMINEVLKMAKLIALKSPVGVQGTKN 229
Query: 283 AVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRP 158
A+N A + T+++ L + + T+D + A + K+P
Sbjct: 230 ALNYARDHTVENSLNYVATWNMSQLFTDDIMKASMASLSKQP 271
>AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical
protein Y25C1A.13 protein.
Length = 297
Score = 100 bits (240), Expect = 1e-21
Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 18/236 (7%)
Frame = -3
Query: 796 AVNDFDADSNIAAIIITGNEKAFAAGADIKE--------MQNNTYSSNTK----QGFLRE 653
A++ D +III+G KAF AG DI +Q++T K + F+ E
Sbjct: 61 AIDSLADDPKCRSIIISGEGKAFCAGIDIAHGLSDILRIIQDDTIEVGRKGRLVRKFIGE 120
Query: 652 WED----ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGG 485
+D + C KPIIA+++ LG G +L CDI A + A F E+++G G
Sbjct: 121 IQDCYTALERCPKPIIASIHSHCLGAGIDLITACDIRVASQDAIFSIREVDVGLAADIGT 180
Query: 484 TQRLPRYVGK-SKAMEIVLTGNFFDAHEAEKMGLVSKVF-PVEKLLEETIKLAERIGTHS 311
R+ + VG S ++ T F A EA + GL+S+++ + LLE +I +A RI S
Sbjct: 181 LNRIQKVVGNDSWTRDVAFTARDFGADEALRFGLISRIYDDRQSLLENSIDMAARIAEKS 240
Query: 310 PLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKN 143
P+ V+ K+ +N A E + L F K+ + D A + K+ +++
Sbjct: 241 PIAVQGTKETLNYAREHSTDDSLNFIKTWNMSQLLSTDLLSSAMAVMNKKKATYED 296
>Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical
protein B0272.4 protein.
Length = 255
Score = 97.5 bits (232), Expect = 1e-20
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 2/207 (0%)
Frame = -3
Query: 790 NDFDADSNIAAIIITGNE-KAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIA 614
ND D +IA ++ TG + K + AG+D + +T + + G+ + + KPIIA
Sbjct: 41 NDAADDDDIAFVVFTGGKGKYYCAGSDFSPAELSTLTDIQEHGYKLFVDILIAFPKPIIA 100
Query: 613 AVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIV 434
VNG A+G + + D + A + A F P +IG P A + LPR +G KA ++
Sbjct: 101 LVNGHAVGVSVTMLGVMDAVIAIDTATFATPFADIGVCPEACSSYTLPRIMGHQKAAALM 160
Query: 433 LTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQA-YETT 257
+ F AHEA GLV+++ P ++ K+ +R SP+ +K+AK+ + +
Sbjct: 161 MFSEKFTAHEAHIAGLVTQILPAATFEKDAKKIIDRYSKLSPITMKVAKELMRTTQIKDE 220
Query: 256 LKSGLQFEKSTFYGTFATEDRKEGMTA 176
L + + E+ G F+ ED +TA
Sbjct: 221 LLTVNRKEQVHLNGMFSHEDTIARLTA 247
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 91.1 bits (216), Expect = 8e-19
Identities = 50/147 (34%), Positives = 85/147 (57%), Gaps = 7/147 (4%)
Frame = -3
Query: 793 VNDFDADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCG 629
++ +D +I +I++ +G +F AGADI+ ++ ++ T+ RE ++ I
Sbjct: 94 LDKLQSDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LSREGQEQFFRIEKSQ 152
Query: 628 KPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK 455
KP++AA+ G +GGG ELA+ C I +K PE+ +G +PGAGGTQRLP+
Sbjct: 153 KPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTV 212
Query: 454 SKAMEIVLTGNFFDAHEAEKMGLVSKV 374
+++ LTG A +A+K+G+V +V
Sbjct: 213 QNVLDLTLTGKKIKADKAKKIGIVDRV 239
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 91.1 bits (216), Expect = 8e-19
Identities = 50/147 (34%), Positives = 85/147 (57%), Gaps = 7/147 (4%)
Frame = -3
Query: 793 VNDFDADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCG 629
++ +D +I +I++ +G +F AGADI+ ++ ++ T+ RE ++ I
Sbjct: 68 LDKLQSDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LSREGQEQFFRIEKSQ 126
Query: 628 KPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK 455
KP++AA+ G +GGG ELA+ C I +K PE+ +G +PGAGGTQRLP+
Sbjct: 127 KPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTV 186
Query: 454 SKAMEIVLTGNFFDAHEAEKMGLVSKV 374
+++ LTG A +A+K+G+V +V
Sbjct: 187 QNVLDLTLTGKKIKADKAKKIGIVDRV 213
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 91.1 bits (216), Expect = 8e-19
Identities = 50/147 (34%), Positives = 85/147 (57%), Gaps = 7/147 (4%)
Frame = -3
Query: 793 VNDFDADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCG 629
++ +D +I +I++ +G +F AGADI+ ++ ++ T+ RE ++ I
Sbjct: 94 LDKLQSDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LSREGQEQFFRIEKSQ 152
Query: 628 KPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK 455
KP++AA+ G +GGG ELA+ C I +K PE+ +G +PGAGGTQRLP+
Sbjct: 153 KPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTV 212
Query: 454 SKAMEIVLTGNFFDAHEAEKMGLVSKV 374
+++ LTG A +A+K+G+V +V
Sbjct: 213 QNVLDLTLTGKKIKADKAKKIGIVDRV 239
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 89.8 bits (213), Expect = 2e-18
Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Frame = -3
Query: 778 ADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCGKPIIA 614
+D ++ AI++ +G +F AGADI+ + ++ LRE + I KPI+A
Sbjct: 73 SDQSVKAIVVMSGKPNSFVAGADIQMFKAEKTAAGVSN-LLREGQKQLLTIELSQKPIVA 131
Query: 613 AVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAME 440
A+ G +GGG E+A+ C I +K G PE+ +G +PG GGTQRLP+ ++
Sbjct: 132 AIMGSCMGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMPGDGGTQRLPKLTTVQNVLD 191
Query: 439 IVLTGNFFDAHEAEKMGLVSKV 374
+ LTG A++A K+G+V +V
Sbjct: 192 LTLTGKRIKANKAMKIGIVDRV 213
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 62.9 bits (146), Expect = 3e-10
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 9/213 (4%)
Frame = -3
Query: 775 DSNIAAIIITGNEKAFAAGADI---KEMQNNTYS-----SNTKQGFLREWEDIS-NCGKP 623
D + + +IT N + AG D+ K T +NT + ++++ + N KP
Sbjct: 169 DKSTSITVITANGSYYCAGNDLTNFKAAAGGTKEQIADMANTAKVIMKDYVNAYINHEKP 228
Query: 622 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAM 443
+IA +NG A+G + + D + A +KA F P +G P + P +G +A
Sbjct: 229 LIALINGPAVGIAVTVLGMFDYVIATDKASFHTPFAPLGQSPEGVSSYTFPLIMGSLRAS 288
Query: 442 EIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYE 263
E++L A A+ GLV++V P + K E P +++ K+ + ++
Sbjct: 289 EMLLVCKKISAQTAKDYGLVNEVVPDAEFQSHAQKTVEAFSQLPPETLRINKKLLRSLHK 348
Query: 262 TTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEK 164
L E + +++ + + AF+ K
Sbjct: 349 EKLLEVNNIEADQICERWQSKECHQAIAAFMTK 381
>U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical
protein C32E8.9 protein.
Length = 268
Score = 57.6 bits (133), Expect = 1e-08
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
Frame = -3
Query: 784 FDADSNIAAIIITGNEKAFAAGAD---IKEMQNNTYSSNTKQGFLREWEDISNCGKPIIA 614
F D N A I+++G K+F +GAD IK++ + + + + IA
Sbjct: 64 FSDDQN-AIIVVSGVGKSFCSGADLGLIKDISDQKLGVQMFEYMSSILSLLHSSPAISIA 122
Query: 613 AVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIV 434
++G ALGG E+ DI A +K + +G +P GG + + +G+ +A+ +
Sbjct: 123 KIHGHALGGATEICSSTDIRIAHSGSKIAFFQSKMGIVPSWGGAEYMEGIMGRGRALAAM 182
Query: 433 LTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIG 320
N A EA+ G V V+ E E I G
Sbjct: 183 GRANVMSAEEAKDQGYVDYVYKSEDEAENFINQVASAG 220
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 53.2 bits (122), Expect = 2e-07
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Frame = -3
Query: 784 FDADSNIAAIIITGN-EKAFAAGADI-------KEMQNNTYSSNTKQGFLREW---EDIS 638
+++ S++ +I+ G+ +KAF AG D+ K+ ++ + K F E+ I
Sbjct: 50 WNSSSDVDLVILKGSGDKAFCAGGDVLAVVRSFKDSESGKECTMHKDFFREEYILNHLIG 109
Query: 637 NCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVG 458
K + ++G +GGGC L++ A EK PE +G P GG+ L R G
Sbjct: 110 TLNKQYVCLIDGIVMGGGCGLSVNGRFRVATEKTMLAMPETALGLFPDVGGSYFLSRLKG 169
Query: 457 KSKAMEIVLTGNFFDAHEAEKMGLVS 380
+ M + LTG +A GL +
Sbjct: 170 -NLGMYLALTGYRLLGADAFHAGLAT 194
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 53.2 bits (122), Expect = 2e-07
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Frame = -3
Query: 784 FDADSNIAAIIITGN-EKAFAAGADI-------KEMQNNTYSSNTKQGFLREW---EDIS 638
+++ S++ +I+ G+ +KAF AG D+ K+ ++ + K F E+ I
Sbjct: 73 WNSSSDVDLVILKGSGDKAFCAGGDVLAVVRSFKDSESGKECTMHKDFFREEYILNHLIG 132
Query: 637 NCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVG 458
K + ++G +GGGC L++ A EK PE +G P GG+ L R G
Sbjct: 133 TLNKQYVCLIDGIVMGGGCGLSVNGRFRVATEKTMLAMPETALGLFPDVGGSYFLSRLKG 192
Query: 457 KSKAMEIVLTGNFFDAHEAEKMGLVS 380
+ M + LTG +A GL +
Sbjct: 193 -NLGMYLALTGYRLLGADAFHAGLAT 217
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 475 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 302
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 71 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 130
Query: 301 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 212
K VN Y T+ G F E + YGT
Sbjct: 131 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 162
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 475 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 302
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 103 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 162
Query: 301 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 212
K VN Y T+ G F E + YGT
Sbjct: 163 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 194
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 475 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 302
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 113 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 172
Query: 301 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 212
K VN Y T+ G F E + YGT
Sbjct: 173 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 204
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 475 LPRYVGKSKAMEIVLTGNFFDAH--EAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLI 302
+P+ +++E + N AH E E+ + +FPVEK ETI G + +I
Sbjct: 113 IPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVI 172
Query: 301 VK-LAKQAVNQAYETTLKSGLQF-EKSTFYGT 212
K VN Y T+ G F E + YGT
Sbjct: 173 DKGTVDVYVNHEYVLTINEGGSFGELALIYGT 204
>Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical
protein ZK856.7 protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 781 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDIS--NCGKPI 620
D D + I+ N K + +K++Q NT+ + L++WE + + GKP+
Sbjct: 26 DTDKKFSGQIVASNGKKSERWSYLKKLQKNTFQQKADECGLKDWEITTWDDAGKPV 81
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 485 ASGSGDGANVDLGLTEFRLFAGIDDIAQHCQLTTTSKSETINS-GNDGLPTV-GDVLPFT 658
A G+ + LTE L +D++ + C++ ++ +NS DGL + G + FT
Sbjct: 2162 AEGAAISKALSSALTEPELKLELDEVVRWCEMAEKEAAQNVNSLDGDGLEKLDGRLAQFT 2221
Query: 659 KE 664
KE
Sbjct: 2222 KE 2223
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 485 ASGSGDGANVDLGLTEFRLFAGIDDIAQHCQLTTTSKSETINS-GNDGLPTV-GDVLPFT 658
A G+ + LTE L +D++ + C++ ++ +NS DGL + G + FT
Sbjct: 2162 AEGAAISKALSSALTEPELKLELDEVVRWCEMAEKEAAQNVNSLDGDGLEKLDGRLAQFT 2221
Query: 659 KE 664
KE
Sbjct: 2222 KE 2223
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 485 ASGSGDGANVDLGLTEFRLFAGIDDIAQHCQLTTTSKSETINS-GNDGLPTV-GDVLPFT 658
A G+ + LTE L +D++ + C++ ++ +NS DGL + G + FT
Sbjct: 2162 AEGAAISKALSSALTEPELKLELDEVVRWCEMAEKEAAQNVNSLDGDGLEKLDGRLAQFT 2221
Query: 659 KE 664
KE
Sbjct: 2222 KE 2223
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -1
Query: 558 SSMPAKRRNSVSPRSTLAPSPE-PEAPSVF 472
SS+ + RNS+SPR +++P+ APSVF
Sbjct: 775 SSLTSNPRNSISPRRSISPTTTVRSAPSVF 804
>Z75531-9|CAA99802.1| 277|Caenorhabditis elegans Hypothetical
protein K01D12.12 protein.
Length = 277
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +2
Query: 182 HTFFAVLRSKGSIEG------GLLKLQARFEGGLVSLVHSLFGQLHN*RGVGS 322
H F+ +LR K S++ GLL L + F LV LV ++FG R VG+
Sbjct: 140 HLFYVLLRYKSSVDMFYEIIVGLLGLPSAFNAVLVPLVKAVFGSKVYSRCVGA 192
>AY728060-1|AAU43721.1| 277|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-6 protein.
Length = 277
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +2
Query: 182 HTFFAVLRSKGSIEG------GLLKLQARFEGGLVSLVHSLFGQLHN*RGVGS 322
H F+ +LR K S++ GLL L + F LV LV ++FG R VG+
Sbjct: 140 HLFYVLLRYKSSVDMFYEIIVGLLGLPSAFNAVLVPLVKAVFGSKVYSRCVGA 192
>Z77133-2|CAB00864.2| 664|Caenorhabditis elegans Hypothetical
protein K03A11.4 protein.
Length = 664
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 404 SRENGSCQ*SIPSGKTFRRNHQAG*KDRNPLPVNCEVGQTSCEPSLRD 261
+ +N C+ + K+ RRNH G R P PV+CE + +C + +D
Sbjct: 125 TNKNLECRARCHTRKSDRRNH-IGEWMRTPGPVDCEFLEAACSENNQD 171
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 543 KRRNSVSPRSTLAPSPEPEAPSVFPDTLASRK 448
KR+ S+S + P EPE P P T SRK
Sbjct: 246 KRQASMSASAKKQPKLEPEEPEEVPSTSRSRK 277
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 406 HEHQRSFLSTRSPLLSTCQRIW 471
H H F++T+ PL +TC+ W
Sbjct: 1230 HGHPHRFIATQGPLDNTCEDFW 1251
>Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical
protein C50H2.5 protein.
Length = 265
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 463 VGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAER 326
+GK++A+ L GN FD+ E + G K L+E K AE+
Sbjct: 65 LGKTQAVLCFLKGNHFDSQEIIRRGFYDKRH--HAFLQELFKKAEK 108
>AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical
protein C14C6.7 protein.
Length = 509
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -1
Query: 564 AISSMPAKRRNSVSPRSTLAPSPEPEAPSVFPDTLAS--RKQWRSC*QETSLMLMKPRKW 391
A+ +MP +S ST AP+P + +FP + ++W E+ +KW
Sbjct: 58 AVETMPETSTSSFHLSSTAAPAPHSQDYQIFPQNSSDCPFEEWNQIRTESIPNTELHKKW 117
Query: 390 VLSVKYSQWKNF*KKPS 340
+ K S + K PS
Sbjct: 118 LEKWKSSFKYLYHKLPS 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,858,969
Number of Sequences: 27780
Number of extensions: 475329
Number of successful extensions: 1611
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1597
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -