Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10b05
(852 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 27 0.72
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 27 0.96
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 26 1.7
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 26 1.7
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 26 1.7
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 26 1.7
AF457565-1|AAL68795.1| 391|Anopheles gambiae TRIO protein protein. 25 2.2
U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein. 25 2.9
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 2.9
DQ518576-1|ABF66618.1| 276|Anopheles gambiae putative cytoplasm... 24 6.7
AY745218-1|AAU93485.1| 159|Anopheles gambiae cytochrome P450 pr... 24 6.7
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 8.9
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 27.1 bits (57), Expect = 0.72
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +2
Query: 260 PGRQSSRVCQRWPSVWGPP*AGGRR-----AWPRVCPASR 364
P R+S R RWPS PP R +WPR P S+
Sbjct: 257 PRRRSPRSGGRWPSCRSPPARRRSRSTRPTSWPRSRPTSK 296
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 26.6 bits (56), Expect = 0.96
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 658 PRPTRKTALSSRPTNQVKSSSRTSITWTP-GRLWSRSSKRVWSRASESPTSTRSS 497
PR R A+ +R T ++ S P +WSR S + A + STRSS
Sbjct: 37 PRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRCAPARTASCSTRSS 91
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 25.8 bits (54), Expect = 1.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 661 GPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSS 497
G + T LS+ ++++ R++ +PG + ++ R ++ PT TRSS
Sbjct: 415 GTTRSTSTKLSNCSMRTIRTTVRSTRAPSPGPIVYYPARETLPRLAQPPTITRSS 469
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 25.8 bits (54), Expect = 1.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -3
Query: 664 TGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGC 485
+G R + SR ++ +S SR+ G SRS R S S S + +RS +
Sbjct: 1083 SGSRAGSRAGSGSRSRSRSRSRSRSRSGSAKG---SRSRSRSGSGGSRSRSRSRSRSQSA 1139
Query: 484 CSTRLSSRSSIR 449
S + SRS R
Sbjct: 1140 GSRKSGSRSRSR 1151
Score = 23.8 bits (49), Expect = 6.7
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -3
Query: 649 TRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCCSTRL 470
+R + SR ++ +S S+++ + G SRS R S+AS +RS R +R
Sbjct: 1119 SRSGSGGSRSRSRSRSRSQSAGSRKSG---SRSRSRSGSQASRGSRRSRSRSRSRSGSRS 1175
Query: 469 SSRS 458
SRS
Sbjct: 1176 RSRS 1179
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 620 RSGRESRLPCRPGASVSGTDPSTERSDCPGSPAGHRAP 733
R+G +S P G + SG D T+ D P + A +P
Sbjct: 559 RTGPKSLAPDHEGDNDSGVDEYTQEKDRPNALASPASP 596
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 25.8 bits (54), Expect = 1.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 312 GPQTEGHR*QTREDCRPGPHQIPDRQREHRDP 217
GPQT R +D +PGP + Q++ + P
Sbjct: 40 GPQTRKGRRPVADDQQPGPSGLQRLQQQQQQP 71
>AF457565-1|AAL68795.1| 391|Anopheles gambiae TRIO protein protein.
Length = 391
Score = 25.4 bits (53), Expect = 2.2
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2
Query: 581 VDTWKAMEPLVKE 543
+D WKA+EPL KE
Sbjct: 134 LDAWKALEPLQKE 146
>U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein.
Length = 280
Score = 25.0 bits (52), Expect = 2.9
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -2
Query: 845 NEKEVGEAIXSKIKEGV--VTREDLFITSKLWNTFHR-PDLVRGALQETLDNLNV 690
N E+G S++ E V V + +T + T+H P+L +G L + + NLNV
Sbjct: 3 NFVEMGPYTLSEVHERVNLVWNANNTVTYEQRRTWHFVPELSKGTLDDQVTNLNV 57
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 25.0 bits (52), Expect = 2.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 629 RESRLPCRPGASVSGTDPSTERSDCPGSPAGHRAPSPGDETCST 760
R RL G +++ D ER+D P+G R + +E +T
Sbjct: 1159 RNRRLLGMSGQAINNDDDGRERADLAAGPSGMRNRAIDEENEAT 1202
>DQ518576-1|ABF66618.1| 276|Anopheles gambiae putative cytoplasmic
carbonic anhydrase protein.
Length = 276
Score = 23.8 bits (49), Expect = 6.7
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 305 WGPP*AGGRRAWPRVCPASRGE 370
WG G + WP + P +RG+
Sbjct: 5 WGYTQMNGPQKWPEMFPQARGQ 26
>AY745218-1|AAU93485.1| 159|Anopheles gambiae cytochrome P450
protein.
Length = 159
Score = 23.8 bits (49), Expect = 6.7
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 21 YSTLLRMFQLKFFIFERVMLVPEGSCHGHQPTAAVERVDEGDV-LPGELEV 170
Y TL R+ ++ + E + L+P + G + TA VD G LP ++++
Sbjct: 46 YETLNRLTYMELVLKESLRLLPIAAVVGRRTTA---EVDLGQYRLPADIDI 93
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 23.4 bits (48), Expect = 8.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 381 DLHAASLTELLEAFLVEVRMTFHLID 458
D+HA +TEL F +E ++ ID
Sbjct: 575 DIHANKITELGNYFEIESQLALSTID 600
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,416
Number of Sequences: 2352
Number of extensions: 17562
Number of successful extensions: 61
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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