Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10b05
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 260 1e-69
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 256 2e-68
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 214 8e-56
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 196 1e-50
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 178 5e-45
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 166 2e-41
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 139 2e-33
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 138 5e-33
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 134 1e-31
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 130 9e-31
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 101 6e-22
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical ... 48 8e-06
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 31 0.79
U97404-2|AAB93309.1| 795|Caenorhabditis elegans Acid-sensing/am... 30 2.4
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 29 3.2
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 29 3.2
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 29 3.2
AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical ... 29 3.2
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 3.2
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 4.2
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 4.2
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 4.2
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 29 4.2
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 7.3
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 7.3
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 7.3
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 7.3
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 7.3
Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical pr... 28 9.7
AF039051-9|AAB94260.1| 169|Caenorhabditis elegans Hypothetical ... 28 9.7
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 260 bits (636), Expect = 1e-69
Identities = 127/269 (47%), Positives = 172/269 (63%), Gaps = 2/269 (0%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLY 672
Y N+KEVGEA+ + EG V RE+LFITSK+WNTFH + L +L + Y+DL
Sbjct: 49 YQNQKEVGEALKEILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLM 108
Query: 671 LIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLE 492
LIHWPQ Y E LFP ++GK+++SDVDY++TWKA E K G +SIG+SNF Q++
Sbjct: 109 LIHWPQGYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQ 168
Query: 491 RLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDRPWAKPD-DPQLM 315
R+ A VKP QVE HPY Q +L+EFC+ +G+ + YSPLG+P + + D DP ++
Sbjct: 169 RVWDAAEVKPACLQVELHPYFTQVKLREFCKEKGIVVVGYSPLGNPGSAFFRKDGDPNVL 228
Query: 314 EDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDFKLSREDVALI 135
+ + IA GKT AQ+++R+ +DSG IPKSVT RI N V+DF+LS E++ I
Sbjct: 229 TNEVVAGIAKAHGKTPAQIILRWFVDSGLSAIPKSVTPQRIIENISVIDFQLSAEEIQAI 288
Query: 134 DSFDCGGRLV-PMTASLGHKHHPFENEEF 51
D + G RLV P HK+ F NEEF
Sbjct: 289 DGVNRGWRLVDPSPRDGDHKYFGF-NEEF 316
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 256 bits (626), Expect = 2e-68
Identities = 122/267 (45%), Positives = 171/267 (64%), Gaps = 2/267 (0%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLY 672
Y N+KEVGEA+ + EG V RE+LFITSK+WNTFH + L +L + Y+DL
Sbjct: 49 YQNQKEVGEALKEILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLM 108
Query: 671 LIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLE 492
LIHWPQ Y E LFP ++GK+++SDVDY++TWKA E K G +SIG+SNF Q++
Sbjct: 109 LIHWPQGYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQ 168
Query: 491 RLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDRPWAKPD-DPQLM 315
R+ A VKP QVE HPY Q +L+EFC+ +G+ + YSPLG+P + + D DP ++
Sbjct: 169 RVWDAAEVKPACLQVELHPYFTQVKLREFCKEKGIVVVGYSPLGNPGSAFFRKDGDPNVL 228
Query: 314 EDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDFKLSREDVALI 135
+ + IA GKT AQ+++R+ +DSG IPKSVT RI+ N V DF+L+ E+++ I
Sbjct: 229 TNEVVAGIAKAHGKTPAQIILRWFVDSGLSAIPKSVTPQRISENLAVFDFQLTAEEISKI 288
Query: 134 DSFDCGGRLVPMTASLG-HKHHPFENE 57
D + R+V ++ G H H PF E
Sbjct: 289 DGINKNWRIVDLSQRDGDHPHCPFLEE 315
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 214 bits (522), Expect = 8e-56
Identities = 112/271 (41%), Positives = 164/271 (60%), Gaps = 7/271 (2%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLY 672
Y NE +G+ + I G + RED+F+TSKL T H P+ V ++ L L ++Y+DLY
Sbjct: 51 YQNEHIIGKVLHEYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLY 110
Query: 671 LIHWPQAYK-EDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQL 495
LIH P +K ++GS P ++G++ +++ ++DTW+A+E L KEG +K++GVSNF+ QL
Sbjct: 111 LIHCPFPFKHQEGSFAPLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQL 170
Query: 494 ERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDRPWAKPD----- 330
+ L A VKP QVECH Y Q+ L+ C+ GV +TAY+PLGSP R A+PD
Sbjct: 171 QALYDAAEVKPANQQVECHIYWPQQELRALCKKLGVTVTAYAPLGSPGRKAARPDGVWPE 230
Query: 329 -DPQLMEDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDFKLSR 153
DP L +P +K +A + KT AQ+LIR+ G IPKSV+ RI N DFKLS
Sbjct: 231 GDPLL--EPIVKQLAAKYHKTAAQILIRHLTQHGISTIPKSVSPDRIVENISTFDFKLSD 288
Query: 152 EDVALIDSFDCGGRLVPMTASLGHKHHPFEN 60
ED+ ++S + RL ++ H P ++
Sbjct: 289 EDMHTLNSIETRTRLFIADFAVKHPFFPHDD 319
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 196 bits (479), Expect = 1e-50
Identities = 95/269 (35%), Positives = 163/269 (60%), Gaps = 7/269 (2%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLY 672
+ N++EV I K V RE+LF++SK+WNT+H + + E L+ Y+DL
Sbjct: 51 FKNQEEVAAGIKDWCKIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLI 110
Query: 671 LIHWPQAYKEDG-----SLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFN 507
+IHWP + ED L+P +GK+++SDVDY++TWKA+E + G ++SIG++NFN
Sbjct: 111 VIHWPFGWAEDEPPGERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFN 170
Query: 506 SKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDRP-WAKPD 330
Q+E++ +KP V QVE +P+L+Q+ +++FC +G+ +TA+ G+P + K +
Sbjct: 171 IGQVEQVWTKGLIKPAVLQVEMNPFLDQEEIRQFCREKGIILTAFMLTGNPGSALYRKHE 230
Query: 329 DPQLMEDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDFKLSRE 150
DP L+ + L++IA GK+V QVL+R+ ID + KS RI N ++ F+L+ +
Sbjct: 231 DPNLLYNETLQSIAKGHGKSVVQVLVRWAIDLRTTALVKSSESKRIRQNINIFKFRLTSQ 290
Query: 149 DVALIDSFDCGGRLV-PMTASLGHKHHPF 66
++A I + + R++ P+ + H + P+
Sbjct: 291 EIARIKALNIDFRILNPLLGNYDHPYFPW 319
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 178 bits (433), Expect = 5e-45
Identities = 105/275 (38%), Positives = 153/275 (55%), Gaps = 10/275 (3%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLY 672
Y NE+ +G AI ++EGVV RE+LFIT+K W P + G L+E+L L ++Y+DLY
Sbjct: 52 YQNEEAIGTAIKELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLY 111
Query: 671 LIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLE 492
L H P A+ + D S I S V+ D W+ + + K GL K++GVSN+N+ Q+
Sbjct: 112 LAHMPAAFND-------DMSEHIA-SPVE--DVWRQFDAVYKAGLAKAVGVSNWNNDQIS 161
Query: 491 RLLQHATVKPVVN-QVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDR-----PWAKPD 330
R L + PV N QVE H Y Q +FC+ + +T+Y+ LGSP R P +
Sbjct: 162 RALA-LGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNFTLPTGQKL 220
Query: 329 D----PQLMEDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDFK 162
D P ++D + A+A++ KT AQVL+RY +D G ++PKS+ +RI NF+V DF
Sbjct: 221 DWAPAPSDLQDQNVLALAEKTHKTPAQVLLRYALDRGCAILPKSIQENRIKENFEVFDFS 280
Query: 161 LSREDVALIDSFDCGGRLVPMTASLGHKHHPFENE 57
L+ ED+A ++ RL GH F E
Sbjct: 281 LTEEDIAKLEESKNSQRLFLQDFMTGHPEDAFAAE 315
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 166 bits (403), Expect = 2e-41
Identities = 94/254 (37%), Positives = 141/254 (55%), Gaps = 11/254 (4%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLY 672
Y NE ++G+A+ EG++ RED+FIT+K + PD+V AL+ +L L + Y+DLY
Sbjct: 52 YQNEHQIGDALAELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLY 111
Query: 671 LIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLE 492
L H P + K+DGS SDV D W+ E + GL K+IGVSNFN Q+
Sbjct: 112 LAHIPASTKDDGSFR----------SDVKVEDIWRGFEKVYGLGLTKAIGVSNFNESQIV 161
Query: 491 RLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSP---------DRPW- 342
R++ V +Q+E H YL QK +E C+ + ITAY+ LGSP RP
Sbjct: 162 RIMNIQKVPIHASQLELHLYLPQKAHRELCKKHNILITAYATLGSPGRMSVVGSNGRPLF 221
Query: 341 -AKPDDPQLMEDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDF 165
+ + M D +KA+A + KT AQ+L+R ++ G IVIPK+ R+ N ++ DF
Sbjct: 222 ESTQNSENEMNDKHVKALAQKYSKTPAQILLRATVEMGIIVIPKTTNPERMKENINIFDF 281
Query: 164 KLSREDVALIDSFD 123
+S +V L+++ +
Sbjct: 282 NISNAEVNLLEAHE 295
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 139 bits (337), Expect = 2e-33
Identities = 79/236 (33%), Positives = 127/236 (53%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLY 672
Y NE ++G + + + RED++ITSKL + R +++E+L NL V+YLDL
Sbjct: 48 YNNEAKIGRILEKLLPANGLKREDIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLL 107
Query: 671 LIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLE 492
LIHWP GS ++ + V++W M ++ EG ++S+GVSNF LE
Sbjct: 108 LIHWP------GSSLKSENPANKKLR----VESWNVMCEMMAEGKLRSVGVSNFEICHLE 157
Query: 491 RLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDRPWAKPDDPQLME 312
L + + V P VNQVE HP+ +Q L ++C + AYS LGSP + K QL E
Sbjct: 158 ELKKDSNVVPAVNQVEYHPHFHQDDLVKYCNENNIHFQAYSSLGSP--TYRK----QLSE 211
Query: 311 DPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDFKLSREDV 144
+P +K +A + + +L+ + G V+P++ +A+NF V +++ED+
Sbjct: 212 EPLIKELAQKYNVEIPVLLLGFAYCQGISVLPRTTNPEHVATNFKVTKLAITQEDI 267
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 138 bits (334), Expect = 5e-33
Identities = 81/256 (31%), Positives = 138/256 (53%), Gaps = 1/256 (0%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLW-NTFHRPDLVRGALQETLDNLNVQYLDL 675
Y NEKE+GEA+ + + ++R D+F+TSK + + + + RG ++E+L +L Y+D+
Sbjct: 57 YLNEKELGEALKILLPKHGLSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDM 116
Query: 674 YLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQL 495
YL+H+P+ D D ++ + Y + +E G V+SIGVSN+ L
Sbjct: 117 YLVHYPKPNDSDN-----DDVNNAEYRKIAY----EVLEEAKAAGKVRSIGVSNYEIVHL 167
Query: 494 ERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDRPWAKPDDPQLM 315
E L +A V P NQ+E HP+ + L+++C+ + + A+S L +P+L+
Sbjct: 168 EELKTYAKVPPCANQLEYHPHFARIPLQKYCKEKNIFFQAFSSLAR--------HEPKLI 219
Query: 314 EDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDFKLSREDVALI 135
EDP + +A + +V VL+ + + ++PKSVT SRI NF V+D L+ ED+ +
Sbjct: 220 EDPVVVELAKKHNTSVPLVLLAWALRQNVGIVPKSVTPSRIVENFKVIDIALTPEDIQSL 279
Query: 134 DSFDCGGRLVPMTASL 87
+ D G + T L
Sbjct: 280 TALDRGQHYIRCTGWL 295
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 134 bits (323), Expect = 1e-31
Identities = 85/249 (34%), Positives = 130/249 (52%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLY 672
YG EK++G A+ K V RE++F+++KLW D V A Q + + L YLD+Y
Sbjct: 49 YGVEKQLGIAV----KNCSVPREEMFLSTKLWPV-DCGDEVYNAFQTSCEKLQTDYLDMY 103
Query: 671 LIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLE 492
+IH PQ D + + K TW+ ME L ++ V+SIGVSN++ + L+
Sbjct: 104 MIHMPQL--PDWIVNQKETKEK----------TWRQMELLYEDEHVRSIGVSNYSIEDLD 151
Query: 491 RLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDRPWAKPDDPQLME 312
LL+ A++ P NQVE HP+ +Q LK +C+ G+ Y PL + +E
Sbjct: 152 ELLEFASILPHANQVELHPWFHQADLKNYCDELGILTMGYCPLAK----------GKYLE 201
Query: 311 DPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDFKLSREDVALID 132
D L IA + K+ AQ+ +R+ I +PKS R+ N +V DF+LS ED+ ++
Sbjct: 202 DETLCKIASKYQKSPAQICLRWSIQQNVPTVPKSTDCRRLKENTNVFDFELSAEDMNTLN 261
Query: 131 SFDCGGRLV 105
SF R +
Sbjct: 262 SFSSQNRKI 270
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 130 bits (315), Expect = 9e-31
Identities = 77/245 (31%), Positives = 137/245 (55%), Gaps = 2/245 (0%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKL--WNTFHRPDLVRGALQETLDNLNVQYLD 678
Y NEK++G A+ + + + ED+++TSK+ +++ + +L+R + E+L+ L+ +YLD
Sbjct: 46 YENEKDLGLALKTLLPRHNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLD 105
Query: 677 LYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQ 498
L L+H+P+ P D + + + DTW A+E L EG ++SIGVSN+
Sbjct: 106 LVLVHYPR---------PLDTEDLNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHH 156
Query: 497 LERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDRPWAKPDDPQL 318
+E + + T++P VNQ+E HP+ +K L+ +C + A+SPLG ++ L
Sbjct: 157 IEEMRSYITIEPQVNQIEYHPHFQRKVLRAYCNKNEILFQAFSPLGRGNK--------TL 208
Query: 317 MEDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDFKLSREDVAL 138
+ D ++ IA TVA V++ + + V+ KSVT SR+A N+ L +LS ++
Sbjct: 209 LGDSTMERIALCHKTTVANVILAWIMKGKYGVVAKSVTPSRVAENYTSLSLELSDDEFEK 268
Query: 137 IDSFD 123
I+ +
Sbjct: 269 INGLN 273
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 113 bits (271), Expect = 2e-25
Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 2/247 (0%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLWNTFHRP-DLVRGALQETLDNLNVQYLDL 675
Y NE +G ++ + + +TRED+FIT+K+ + L +L L Y+DL
Sbjct: 57 YKNETFLGNSLKKYLPQFGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDL 116
Query: 674 YLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQL 495
LIH+P+ ++ G+ D +I S V W+ +E + G V+SIGVSN+ L
Sbjct: 117 LLIHYPRD-RDTGN----DDDYEINKSRRKIV--WQTLEKAKESGRVRSIGVSNYEVYHL 169
Query: 494 ERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDRPWAKPDDPQLM 315
+ ++A ++PV+NQ E PYL + LK+FC+ + + +YS L W D +++
Sbjct: 170 VEMFEYAKIRPVLNQYEYQPYLTRPTLKKFCDLNNIVVQSYSSL-----CWG---DKEIL 221
Query: 314 EDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNF-DVLDFKLSREDVAL 138
++ L + + +T +L + S +IPKS T SRI N + + KL+ +++
Sbjct: 222 QEKPLVDLCQKYNQTPQAILYAFAHCSNTSMIPKSATPSRIHDNLHNTIKIKLTEDELKS 281
Query: 137 IDSFDCG 117
+ S D G
Sbjct: 282 LRSLDKG 288
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 101 bits (242), Expect = 6e-22
Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLW-NTFHRPDLVRGALQETLDNLNVQYLDL 675
Y NEKE+G+A+ + + + RED+FIT+K+ NT V+ + E+L L Y+D+
Sbjct: 47 YNNEKEIGDALEILLPKHNLKREDIFITTKMHPNTVEN---VKKLVDESLSLLKTSYIDM 103
Query: 674 YLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQL 495
YLIH+P+++ + G P +++ +I TW + G ++S+GVS+F + L
Sbjct: 104 YLIHYPKSF-DYGDQDPMNKTLRIA--------TWNDLWECKNAGKIRSVGVSSFEIRHL 154
Query: 494 ERLLQHA-TVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPLGSPDRPWAKPDDPQL 318
E L P NQVE HP+ ++ LK +C++ G+ A+S L + L
Sbjct: 155 EELKDLGKNFPPCCNQVEYHPHFTREELKNYCKSEGIFFQAFSSLAR--------HNETL 206
Query: 317 MEDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRSRIASNFDVLDFKLSREDVAL 138
+ + +A++ VL+ + +IPKS R+A N + L E+V
Sbjct: 207 LSSEIITRLAEKYHVPKTTVLLSWATSQKVGIIPKSTNPERLAQNLKTV--LLEEEEVKK 264
Query: 137 IDSFDCGGRLVPMTASL 87
I + + V T L
Sbjct: 265 ICNLNLDKHYVRTTGWL 281
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/88 (37%), Positives = 53/88 (60%)
Frame = -2
Query: 758 WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYV 579
W P + GAL+++L L+++Y+DLYL H P A+ + D S KI+ S V+
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSD-------DMSQKIE-SSVE-- 102
Query: 578 DTWKAMEPLVKEGLVKSIGVSNFNSKQL 495
D W+ + + K GL K++GVSN+N+ Q+
Sbjct: 103 DIWRQFDAVYKAGLAKAVGVSNWNNDQI 130
>AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical
protein E01A2.1 protein.
Length = 276
Score = 48.0 bits (109), Expect = 8e-06
Identities = 31/114 (27%), Positives = 63/114 (55%)
Frame = -2
Query: 788 REDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSG 609
R+++ IT K++ + + A+ + L + +++ ++ +P+ DG D++
Sbjct: 78 RDEIKITMKVFLSAWDVQQIDQAVTSLKEQLKTKDIEVLILSFPELDLIDGES-EEDENN 136
Query: 608 KIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQV 447
+ F V + T+ ME LV+ + SIGVS+F+++QL+ ++ H VKP +N V
Sbjct: 137 R-WFEKVKPLYTY--MEKLVETSEIASIGVSDFSARQLKTIIDHFDVKPSINHV 187
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = -2
Query: 851 YGNEKEVGEAIXSKIKEGVVTREDLFITSKLWNTFHRPDLV 729
Y NE+ +G AI I EGVV REDLFIT+K+ N F LV
Sbjct: 92 YNNEEFIGTAIKEVIAEGVVKREDLFITTKVPNLFSSLRLV 132
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = -2
Query: 374 YSPLGSPDRPWAKPDDPQLMEDPKLKAIADRLGKTVAQVLIRYQIDSGNIVIPKSVTRS 198
Y G R W P PQ+ DP+ + +RL + + + +Y+ I P + S
Sbjct: 46 YKQCGPSGRVWIVPCAPQMTFDPEDRVCKERLDSRIVKPMRKYETSRTIITTPAPIPSS 104
>U97404-2|AAB93309.1| 795|Caenorhabditis elegans
Acid-sensing/amiloride-sensitiveion channel family
protein 1 protein.
Length = 795
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 93 SCHGHQPTAAVERVDEGDVLPG-ELEVEHVK 182
SC GHQ VER + D++ G E++ E +K
Sbjct: 69 SCFGHQAYLIVERFNRNDIIVGVEIKFEEIK 99
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 625 RPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTST 506
RP + +S SR+ TP R W+R+ R S+A S T T
Sbjct: 358 RPVRRSRSRSRSR---TPNRNWTRARSRTRSQAKSSSTLT 394
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 723 CPAGDPGQSERSVLGSVPDTLAPGLQGRR 637
CPAG+PG E GS + PGL+GRR
Sbjct: 150 CPAGEPG--EPGPRGSPGNNGLPGLKGRR 176
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = -3
Query: 673 T*YTGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSW 494
T + G RP + S+ + +V+ R S TW+ R SRS R R+ E S R S
Sbjct: 42 TDFVGKRPKKHHRHKSKKSKKVR---RRSKTWSSSRSRSRSRSRSRGRSQERRRS-RKSR 97
Query: 493 RGCCSTRLSSR 461
+ +RL R
Sbjct: 98 KSRSRSRLKHR 108
>AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical
protein F48A11.5a protein.
Length = 632
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/110 (20%), Positives = 40/110 (36%)
Frame = -1
Query: 765 ETVEHVSSPGLGARCPAGDPGQSERSVLGSVPDTLAPGLQGRRLSLPDRPIR*NPVLGRR 586
E +E + + G A + E V+ ++ D P +GRR P V +
Sbjct: 61 EILETIPAAASGRNAGASSSSRFEPEVI-NIEDDEMPATRGRRRGRAVTPDETTTVDNQV 119
Query: 585 LRGHLEGYGAARQRGSGQEHRSLQLQLEAAGEVAAARDCQAGRQSGGMSS 436
R ++ ++ G+ HR + + G+ +G S SS
Sbjct: 120 KRLRIDDGSSSSSNGAATHHRGAAIPRQKRGQATEPTPSSSGSSSASFSS 169
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 658 PRPTRKTALSSRPTNQVKSSSRTSITWTPG 569
P TRK S P+ ++S SR S T TPG
Sbjct: 475 PPVTRKVRKSMMPSESIRSVSRNSSTSTPG 504
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2
Query: 641 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVS 516
DGS PTD SG + D + + T PL K+GL S S
Sbjct: 5915 DGSPLPTDDSGAVIGPDGEVIPTDSNGIPLNKDGLPLSTDAS 5956
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 641 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGL 537
DGS PTD SG + D + + T + PL K GL
Sbjct: 3736 DGSPLPTDDSGAVIGPDGEVIPTDASGVPLSKLGL 3770
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2
Query: 641 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVS 516
DGS PTD SG + D + + T PL K+GL S S
Sbjct: 5960 DGSPLPTDDSGAVIGPDGEVIPTDSNGIPLNKDGLPLSTDAS 6001
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 641 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGL 537
DGS PTD SG + D + + T + PL K GL
Sbjct: 3781 DGSPLPTDDSGAVIGPDGEVIPTDASGVPLSKLGL 3815
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2
Query: 641 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVS 516
DGS PTD SG + D + + T PL K+GL S S
Sbjct: 5960 DGSPLPTDDSGAVIGPDGEVIPTDSNGIPLNKDGLPLSTDAS 6001
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 641 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGL 537
DGS PTD SG + D + + T + PL K GL
Sbjct: 3781 DGSPLPTDDSGAVIGPDGEVIPTDASGVPLSKLGL 3815
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 552 RQRGSGQEHRSLQLQLEAAGEVAAARDCQAGRQSGGMSSLPQPE 421
RQR G +LQ ++ AA AAA+ A S S LP+ E
Sbjct: 352 RQRNHGNSIIALQERMSAANLAAAAQHAHAPTSSSPQSPLPEIE 395
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 656 GASVSGTDPSTERSDCPGSPAGHRAPSP 739
GAS G+ P+ E++ P PA PSP
Sbjct: 169 GASSGGSAPAAEKAPEPAKPAASSQPSP 196
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 714 GDPGQSERSVLGSVPDTLAPGLQGR 640
G PGQ +S+ G V APGLQG+
Sbjct: 1261 GMPGQPGQSIAGPVGPPGAPGLQGK 1285
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 714 GDPGQSERSVLGSVPDTLAPGLQGR 640
G PGQ +S+ G V APGLQG+
Sbjct: 1260 GMPGQPGQSIAGPVGPPGAPGLQGK 1284
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 714 GDPGQSERSVLGSVPDTLAPGLQGR 640
G PGQ +S+ G V APGLQG+
Sbjct: 1260 GMPGQPGQSIAGPVGPPGAPGLQGK 1284
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 714 GDPGQSERSVLGSVPDTLAPGLQGR 640
G PGQ +S+ G V APGLQG+
Sbjct: 1261 GMPGQPGQSIAGPVGPPGAPGLQGK 1285
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 714 GDPGQSERSVLGSVPDTLAPGLQGR 640
G PGQ +S+ G V APGLQG+
Sbjct: 1297 GMPGQPGQSIAGPVGPPGAPGLQGK 1321
>Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical
protein R06C7.5a protein.
Length = 478
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = -2
Query: 641 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKP 462
+G TD KI ++ ++ KAM L +EG+ + + LE AT K
Sbjct: 356 EGLSVQTDNVKKIVEDEIAFLGLEKAMMMLTEEGVDRQQAHAVIRKTALEAKQLQATQKV 415
Query: 461 VVNQVECHPYLNQKR 417
+ Q P+ + R
Sbjct: 416 DIRQTMADPFFDSVR 430
>Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical
protein F54C8.7b protein.
Length = 307
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 656 GASVSGTDPSTERSDCPGSPAGHRAPSPGDETCSTVSKL*TDL 784
G++ S +PS +D P +P SP ++ T+S++ T +
Sbjct: 3 GSTASPPEPSAPPADSPFAPVTQNDSSPTSDSTETMSRIPTGI 45
>AF039051-9|AAB94260.1| 169|Caenorhabditis elegans Hypothetical
protein C14C6.2 protein.
Length = 169
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Frame = +2
Query: 647 CRPGASVSGT-----DPSTERSDCPGSPA 718
C A+ +GT +PST RSDCPG A
Sbjct: 119 CSSSATTAGTCQDKINPSTGRSDCPGMAA 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,673,354
Number of Sequences: 27780
Number of extensions: 416732
Number of successful extensions: 2136
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2039
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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