Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10b02
         (252 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   4.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   4.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    19   8.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    19   8.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    19   8.1  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 36  LRCYVISNEIYI 71
           LRC++IS  IY+
Sbjct: 222 LRCWLISKCIYV 233


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 36  LRCYVISNEIYI 71
           LRC++IS  IY+
Sbjct: 222 LRCWLISKCIYV 233


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory
          receptor candidate 35 protein.
          Length = 251

 Score = 19.0 bits (37), Expect = 8.1
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 74 YTTFFCGL 97
          Y TFFC L
Sbjct: 49 YVTFFCSL 56


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.0 bits (37), Expect = 8.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 163 RSDFVKLHFTVSFVKLLHSII 225
           R+D  +L+F  SF  L+  I+
Sbjct: 312 RNDLERLYFYWSFALLITRIV 332


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.0 bits (37), Expect = 8.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 63  FHLKLRNSGVI 31
           FHL +RN+ +I
Sbjct: 642 FHLTVRNTSII 652


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,098
Number of Sequences: 336
Number of extensions: 1004
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3844548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)