Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10b01
         (836 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    28   0.11 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    28   0.11 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   4.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.9  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   6.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   6.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 612 VMAAPPPNYIQITIVSYKSQPAVPTRGP 529
           VM +PP N + +T+  Y+  P++   GP
Sbjct: 135 VMMSPPGNVLNLTMPKYEPNPSIIDPGP 162


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 612 VMAAPPPNYIQITIVSYKSQPAVPTRGP 529
           VM +PP N + +T+  Y+  P++   GP
Sbjct: 135 VMMSPPGNVLNLTMPKYEPNPSIIDPGP 162


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -1

Query: 695 TSDMQG-DGESADAEQKEPAQDGEDQD 618
           T D QG D  SADA + E A   E+ D
Sbjct: 695 TEDAQGGDAPSADAAESEDASRMEEVD 721


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 458 QYQSIILHMIYFP*SKTNSERAVPGPRV 541
           Q ++ I+H+I    S  + +R+ P PRV
Sbjct: 397 QVEAAIVHLIANLPSPGSDQRSTPSPRV 424


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 475 YNTLVLHFNCCLENV 431
           Y  +++ F+CCLE V
Sbjct: 243 YQIILVIFDCCLETV 257


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +1

Query: 613 ETSWSSPSCAGSFCSASADSPSPCMSE 693
           E +WSS   A    SA  D  S C SE
Sbjct: 17  ECNWSSGPNATLQSSACTDDLSSCWSE 43


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -2

Query: 85  VNLSTEILMQLALVLCNIH 29
           +NL  +I++ + L++ N+H
Sbjct: 56  INLLVQIILDVILLILNVH 74


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -2

Query: 85  VNLSTEILMQLALVLCNIH 29
           +NL  +I++ + L++ N+H
Sbjct: 56  INLLVQIILDVILLILNVH 74


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -2

Query: 85  VNLSTEILMQLALVLCNIH 29
           +NL  +I++ + L++ N+H
Sbjct: 376 INLLVQIILDVILLILNVH 394


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 622 WSSPSCAGSFCSASADSPSPCMSEVHSV 705
           W+ P C  S C   A S  P  +++  V
Sbjct: 756 WNYPVCWQSNCKKGASSDKPNFTKLIQV 783


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,111
Number of Sequences: 336
Number of extensions: 3014
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)