Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10a23
(798 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.5
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 2.5
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 5.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 7.6
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 441 SL*DCPISNTSYS*NYRCIKYNNYRYVMKI 530
SL + I N +Y NY YNN Y K+
Sbjct: 83 SLSNNTIHNNNYKYNYNNNNYNNNNYNKKL 112
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 441 SL*DCPISNTSYS*NYRCIKYNNYRYVMKI 530
SL + I N +Y NY YNN Y K+
Sbjct: 83 SLSNNTIHNNNYKYNYNNNNYNNNNYNKKL 112
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 66 NKKSIDIFFYSDLYSAQCNANSVLYNIV 149
NKK + + FY+ +Y N +Y+I+
Sbjct: 550 NKKGVSLRFYNVVYKLIDNIKKEIYDIL 577
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.2 bits (45), Expect = 5.7
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 139 II*SDFLLDEVN*RLLCC--QGLMK*K*RCDKVND*KNS 249
I+ +DF DEVN R+L L+K RC K N+ N+
Sbjct: 389 IVNNDFNFDEVNFRILGANVNNLIK-NTRCAKSNNQNNN 426
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 468 TSYS*NYRCIKYNNY--RYVMKIKKL 539
+S S NY+ YNNY Y KKL
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 468 TSYS*NYRCIKYNNY--RYVMKIKKL 539
+S S NY+ YNNY Y KKL
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 468 TSYS*NYRCIKYNNY--RYVMKIKKL 539
+S S NY+ YNNY Y KKL
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 468 TSYS*NYRCIKYNNY--RYVMKIKKL 539
+S S NY+ YNNY Y KKL
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 468 TSYS*NYRCIKYNNY--RYVMKIKKL 539
+S S NY+ YNNY Y KKL
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 468 TSYS*NYRCIKYNNY--RYVMKIKKL 539
+S S NY+ YNNY Y KKL
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 468 TSYS*NYRCIKYNNY--RYVMKIKKL 539
+S S NY+ YNNY Y KKL
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKL 108
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,665
Number of Sequences: 438
Number of extensions: 4421
Number of successful extensions: 25
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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