Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10a18
(822 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118952-1|AAM50812.1| 377|Drosophila melanogaster LD34822p pro... 75 9e-14
AF017777-11|AAC28411.1| 574|Drosophila melanogaster misato prot... 75 9e-14
AE014298-3139|AAF50817.1| 574|Drosophila melanogaster CG1424-PA... 75 9e-14
M14645-1|AAA28987.1| 450|Drosophila melanogaster protein ( D.me... 29 5.8
M14643-1|AAA28985.1| 450|Drosophila melanogaster protein ( D.me... 29 5.8
BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p pro... 29 5.8
BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p pro... 29 5.8
BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p pro... 29 5.8
AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p pro... 29 5.8
AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,... 29 5.8
AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,... 29 5.8
AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA ... 29 5.8
M14644-1|AAA28986.1| 449|Drosophila melanogaster protein ( D.me... 29 7.7
AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p pro... 29 7.7
AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA... 29 7.7
>AY118952-1|AAM50812.1| 377|Drosophila melanogaster LD34822p
protein.
Length = 377
Score = 75.4 bits (177), Expect = 9e-14
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Frame = -2
Query: 791 NSVKEMFELYFQANNFLSATNLTVNEQPLNLKTPFP-QIFTKNLNKYGFIKNDNRLED-- 621
+S+ M +LY+Q S TN PL + PFP ++F +++ G+ + +
Sbjct: 248 DSISHMLQLYYQCTYHGSVTNAAATPLPLKTQLPFPYEMFAAGISRDGYRLPEGAERETG 307
Query: 620 --VESCAVIAGYHNGTFLANMIEKLHRDVSRIRFAKLHKFKEEGLEASEYTESLDKLAEF 447
V+S ++A N T L ++ +H R++ AKL + GLE EY +LD+L EF
Sbjct: 308 SRVDSAPMLAAVQNSTKLGEHLDNVHAQSHRVQLAKLQAYSNSGLERDEYDTALDQLLEF 367
Query: 446 KDNYED 429
+D Y D
Sbjct: 368 RDLYAD 373
>AF017777-11|AAC28411.1| 574|Drosophila melanogaster misato
protein.
Length = 574
Score = 75.4 bits (177), Expect = 9e-14
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Frame = -2
Query: 791 NSVKEMFELYFQANNFLSATNLTVNEQPLNLKTPFP-QIFTKNLNKYGFIKNDNRLED-- 621
+S+ M +LY+Q S TN PL + PFP ++F +++ G+ + +
Sbjct: 445 DSISHMLQLYYQCTYHGSVTNAAATPLPLKTQLPFPYEMFAAGISRDGYRLPEGAERETG 504
Query: 620 --VESCAVIAGYHNGTFLANMIEKLHRDVSRIRFAKLHKFKEEGLEASEYTESLDKLAEF 447
V+S ++A N T L ++ +H R++ AKL + GLE EY +LD+L EF
Sbjct: 505 SRVDSAPMLAAVQNSTKLGEHLDNVHAQSHRVQLAKLQAYSNSGLERDEYDTALDQLLEF 564
Query: 446 KDNYED 429
+D Y D
Sbjct: 565 RDLYAD 570
>AE014298-3139|AAF50817.1| 574|Drosophila melanogaster CG1424-PA
protein.
Length = 574
Score = 75.4 bits (177), Expect = 9e-14
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Frame = -2
Query: 791 NSVKEMFELYFQANNFLSATNLTVNEQPLNLKTPFP-QIFTKNLNKYGFIKNDNRLED-- 621
+S+ M +LY+Q S TN PL + PFP ++F +++ G+ + +
Sbjct: 445 DSISHMLQLYYQCTYHGSVTNAAATPLPLKTQLPFPYEMFAAGISRDGYRLPEGAERETG 504
Query: 620 --VESCAVIAGYHNGTFLANMIEKLHRDVSRIRFAKLHKFKEEGLEASEYTESLDKLAEF 447
V+S ++A N T L ++ +H R++ AKL + GLE EY +LD+L EF
Sbjct: 505 SRVDSAPMLAAVQNSTKLGEHLDNVHAQSHRVQLAKLQAYSNSGLERDEYDTALDQLLEF 564
Query: 446 KDNYED 429
+D Y D
Sbjct: 565 RDLYAD 570
>M14645-1|AAA28987.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-3), complete
cds. ).
Length = 450
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>M14643-1|AAA28985.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-1), complete
cds. ).
Length = 450
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p
protein.
Length = 450
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p
protein.
Length = 450
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p
protein.
Length = 450
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p
protein.
Length = 450
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,
isoform B protein.
Length = 450
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,
isoform A protein.
Length = 450
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA
protein.
Length = 450
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>M14644-1|AAA28986.1| 449|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-2), complete
cds. ).
Length = 449
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E+ E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE 434
>AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p
protein.
Length = 449
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E+ E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE 434
>AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA
protein.
Length = 449
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 587 NGTFLANMIEKL-HR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 429
N T +A +L H+ D+ + A +H + EG+E E+ E+ + LA + +YE+
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE 434
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,718,611
Number of Sequences: 53049
Number of extensions: 712945
Number of successful extensions: 1515
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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