Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10a17
         (340 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   1.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   1.8  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    23   3.1  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           22   5.5  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        22   5.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   5.5  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    22   7.3  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   7.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   9.6  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    21   9.6  

>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 227 SDKLKRCASSEQGDNLLASYGDKTDAVMXPXAFVPTV 117
           +D   R     +G+NLLA  G   +AVM     +P+V
Sbjct: 179 TDIAMRFLLGREGNNLLAPEGGLHEAVMRGGFLLPSV 215


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 160 LSPYDASRLSPCSLDAHLFS 219
           ++PY    L P S DA+LFS
Sbjct: 241 VAPYGYHNLMPLSTDANLFS 260


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 259 VSKDLSGLVWFMTHITISI 315
           +S D +G VWFMT+  I +
Sbjct: 361 LSIDQNGYVWFMTNSIIKL 379


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 330 PGHGEDGDCNMRHEPD 283
           P H ED D  M+H+ D
Sbjct: 143 PYHDEDEDHEMKHDDD 158


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = +3

Query: 87  DIFVVFLVNNNGGHERXRXHHSIRFITVRREQIVSLFTGCASFQFIRLRHL 239
           +I+  F    NGG  R R       +T+  E+ +       SF     RHL
Sbjct: 82  NIYHKFTEEMNGGRRRKRYADGANLLTIADERAIGESDVIMSFLNKANRHL 132


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 224 PTPTSCLLELSTCPKTCRG 280
           P  + C+     CPKTC G
Sbjct: 286 PQNSECVPCKGVCPKTCPG 304


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 108 REIRQRCRNSSLRELE 61
           R+  +RC N SLR +E
Sbjct: 733 RDTDRRCNNGSLRSVE 748


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 124 GTNAXGLITASVLSPYDASRLSPCSLDAHLF 216
           G+   GL+ A V      S  +P SL AH F
Sbjct: 134 GSELRGLVAAQVAGITFISVYAPPSLSAHEF 164


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 39  RNAAHNRLQVLEGLSFDIFVVFLVNN 116
           +NA   R+ VL+G   ++ V FL+ N
Sbjct: 911 QNAIVIRVPVLDGQKLNLKVFFLIMN 936


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 292 MTHITISIFSVSWXL 336
           M   T+S+FSV W L
Sbjct: 315 MVSATLSLFSVCWAL 329


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,123
Number of Sequences: 2352
Number of extensions: 7184
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)