Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10a17
(340 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061519-1|AAL29067.1| 250|Drosophila melanogaster LD47508p pro... 63 1e-10
AE014297-1684|AAF54945.2| 250|Drosophila melanogaster CG9796-PA... 63 1e-10
AY051550-1|AAK92974.1| 213|Drosophila melanogaster GH19763p pro... 36 0.010
AE014297-988|AAF54414.1| 213|Drosophila melanogaster CG9427-PA ... 36 0.010
AY095188-1|AAM12281.1| 207|Drosophila melanogaster LD22034p pro... 33 0.095
AE014297-3350|AAF56157.1| 207|Drosophila melanogaster CG10157-P... 33 0.095
BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p pro... 31 0.38
AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p pro... 31 0.38
AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-P... 31 0.38
AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,... 31 0.38
AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p pro... 28 3.6
AY069067-1|AAL39212.1| 604|Drosophila melanogaster GH08407p pro... 28 3.6
AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubuli... 28 3.6
AE014297-2504|AAF55540.2| 604|Drosophila melanogaster CG7669-PA... 28 3.6
AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA... 28 3.6
AE013599-2202|AAF58053.1| 1173|Drosophila melanogaster CG8434-PA... 27 6.2
U51045-1|AAB01144.1| 548|Drosophila melanogaster alpha esterase... 27 8.2
BT001581-1|AAN71336.1| 543|Drosophila melanogaster RE24420p pro... 27 8.2
AY069743-1|AAL39888.1| 543|Drosophila melanogaster LP07235p pro... 27 8.2
AE014297-630|AAF54004.2| 543|Drosophila melanogaster CG1257-PA ... 27 8.2
>AY061519-1|AAL29067.1| 250|Drosophila melanogaster LD47508p
protein.
Length = 250
Score = 62.9 bits (146), Expect = 1e-10
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Frame = -3
Query: 314 MEIVICVMN--QTSPDKSL--DTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAV 147
M+ + C+M + PD C ++ + ++ + +K CA+S +G LL G+ T +
Sbjct: 117 MDFINCLMKAGKNFPDNVYPGQRCASE-NHINNWENIKTCANSTEGSVLLRKAGESTMRL 175
Query: 146 MXPXAFVPTVIINEKYDKDVETQAFENLKAVVCR-VATPQPSICS 15
P VPT++ NE++DK V +A NL +C+ V+ PQP IC+
Sbjct: 176 KEPLTSVPTILFNEQFDKKVNDRAQVNLVGTICQYVSAPQPRICN 220
>AE014297-1684|AAF54945.2| 250|Drosophila melanogaster CG9796-PA
protein.
Length = 250
Score = 62.9 bits (146), Expect = 1e-10
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Frame = -3
Query: 314 MEIVICVMN--QTSPDKSL--DTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAV 147
M+ + C+M + PD C ++ + ++ + +K CA+S +G LL G+ T +
Sbjct: 117 MDFINCLMKAGKNFPDNVYPGQRCASE-NHINNWENIKTCANSTEGSVLLRKAGESTMRL 175
Query: 146 MXPXAFVPTVIINEKYDKDVETQAFENLKAVVCR-VATPQPSICS 15
P VPT++ NE++DK V +A NL +C+ V+ PQP IC+
Sbjct: 176 KEPLTSVPTILFNEQFDKKVNDRAQVNLVGTICQYVSAPQPRICN 220
>AY051550-1|AAK92974.1| 213|Drosophila melanogaster GH19763p
protein.
Length = 213
Score = 36.3 bits (80), Expect = 0.010
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = -3
Query: 317 KMEIVICVMNQTSPDKS-LDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAVMX 141
+++ V+C M +PD S +D C + +++ + C SSE G L +
Sbjct: 113 QVKFVVCQM--LAPDYSRIDQCANEAGLLTD---VVHCLSSETGTKLQLQ-AELVTKQYS 166
Query: 140 PXAFVPTVIINEKYDKDVETQAFENLKAVVCRVATPQ 30
P +F+PT++ N +D+ ++ + + + VC + Q
Sbjct: 167 P-SFIPTIVYNGVFDQQLQDHSLRDFRGTVCYMLRQQ 202
>AE014297-988|AAF54414.1| 213|Drosophila melanogaster CG9427-PA
protein.
Length = 213
Score = 36.3 bits (80), Expect = 0.010
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = -3
Query: 317 KMEIVICVMNQTSPDKS-LDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAVMX 141
+++ V+C M +PD S +D C + +++ + C SSE G L +
Sbjct: 113 QVKFVVCQM--LAPDYSRIDQCANEAGLLTD---VVHCLSSETGTKLQLQ-AELVTKQYS 166
Query: 140 PXAFVPTVIINEKYDKDVETQAFENLKAVVCRVATPQ 30
P +F+PT++ N +D+ ++ + + + VC + Q
Sbjct: 167 P-SFIPTIVYNGVFDQQLQDHSLRDFRGTVCYMLRQQ 202
>AY095188-1|AAM12281.1| 207|Drosophila melanogaster LD22034p
protein.
Length = 207
Score = 33.1 bits (72), Expect = 0.095
Identities = 20/91 (21%), Positives = 42/91 (46%)
Frame = -3
Query: 320 EKMEIVICVMNQTSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAVMX 141
+ ++++ C+M L+ C ++ D +K C + Q +++L YG +T V
Sbjct: 108 QSLKLIACMMR--GKKNRLEKCADHY-QIDVGD-VKNCKKTRQVNDILRKYGKETAKVSF 163
Query: 140 PXAFVPTVIINEKYDKDVETQAFENLKAVVC 48
VP V ++ Y+ D+ ++ A+ C
Sbjct: 164 QG--VPAVALDNVYNADLSANLTDHFDAIFC 192
>AE014297-3350|AAF56157.1| 207|Drosophila melanogaster CG10157-PA
protein.
Length = 207
Score = 33.1 bits (72), Expect = 0.095
Identities = 20/91 (21%), Positives = 42/91 (46%)
Frame = -3
Query: 320 EKMEIVICVMNQTSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAVMX 141
+ ++++ C+M L+ C ++ D +K C + Q +++L YG +T V
Sbjct: 108 QSLKLIACMMR--GKKNRLEKCADHY-QIDVGD-VKNCKKTRQVNDILRKYGKETAKVSF 163
Query: 140 PXAFVPTVIINEKYDKDVETQAFENLKAVVC 48
VP V ++ Y+ D+ ++ A+ C
Sbjct: 164 QG--VPAVALDNVYNADLSANLTDHFDAIFC 192
>BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p
protein.
Length = 1325
Score = 31.1 bits (67), Expect = 0.38
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 338 RNXQDTEKMEIVICVMNQTSPDKSLDTCLTQVDKMSE--SDKLKRCASSEQGDNLLAS 171
+ Q K E + +NQT+P S+D L ++D+++ D+LKR N + S
Sbjct: 599 KGEQIQPKKEQIRIEINQTAPQNSIDAHLDRIDELNRVLDDRLKRTLQPSDDVNAIES 656
>AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p
protein.
Length = 216
Score = 31.1 bits (67), Expect = 0.38
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -3
Query: 221 KLKRCASSEQGDNLLASYGDKTDAVMXPXAFVPTVIINEKYDKDVETQAFENLKAVVCR 45
K + C +S +LA YG +T + +FVPT++ +D + N + CR
Sbjct: 143 KARECKASRTTAEILAPYGKET--LKLGISFVPTIVFENDFDPYDQRSIRNNFERHFCR 199
>AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-PA
protein.
Length = 216
Score = 31.1 bits (67), Expect = 0.38
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -3
Query: 221 KLKRCASSEQGDNLLASYGDKTDAVMXPXAFVPTVIINEKYDKDVETQAFENLKAVVCR 45
K + C +S +LA YG +T + +FVPT++ +D + N + CR
Sbjct: 143 KARECKASRTTAEILAPYGKET--LKLGISFVPTIVFENDFDPYDQRSIRNNFERHFCR 199
>AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,
isoform A protein.
Length = 1325
Score = 31.1 bits (67), Expect = 0.38
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 338 RNXQDTEKMEIVICVMNQTSPDKSLDTCLTQVDKMSE--SDKLKRCASSEQGDNLLAS 171
+ Q K E + +NQT+P S+D L ++D+++ D+LKR N + S
Sbjct: 599 KGEQIQPKKEQIRIEINQTAPQNSIDAHLDRIDELNRVLDDRLKRTLQPSDDVNAIES 656
>AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p
protein.
Length = 1351
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -3
Query: 338 RNXQDTEKMEIVICVMNQTSPDK------SLDTCLTQVDKMSESDKLKRCASSEQGDNLL 177
R Q+ +K + + + +SPD+ S +C+ + D ++ES K A++E ++
Sbjct: 648 REKQELQKKVVQLAAVLSSSPDRSTVSDLSFASCIEEPDCLAESSSDKDDANTENSEDEA 707
Query: 176 ASYGDKT 156
DKT
Sbjct: 708 TKQLDKT 714
>AY069067-1|AAL39212.1| 604|Drosophila melanogaster GH08407p
protein.
Length = 604
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 278 PDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLLASY 168
P K + + + D SE + CAS ++ DN L Y
Sbjct: 231 PQKDIVSLVDASDNSSEHSVVTMCASGDETDNTLVKY 267
>AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubulin
ring protein protein.
Length = 1351
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -3
Query: 338 RNXQDTEKMEIVICVMNQTSPDK------SLDTCLTQVDKMSESDKLKRCASSEQGDNLL 177
R Q+ +K + + + +SPD+ S +C+ + D ++ES K A++E ++
Sbjct: 648 REKQELQKKVVQLAAVLSSSPDRSTVSDLSFASCIEEPDCLAESSSDKDDANTENSEDEA 707
Query: 176 ASYGDKT 156
DKT
Sbjct: 708 TKQLDKT 714
>AE014297-2504|AAF55540.2| 604|Drosophila melanogaster CG7669-PA
protein.
Length = 604
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 278 PDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLLASY 168
P K + + + D SE + CAS ++ DN L Y
Sbjct: 231 PQKDIVSLVDASDNSSEHSVVTMCASGDETDNTLVKY 267
>AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA
protein.
Length = 1351
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -3
Query: 338 RNXQDTEKMEIVICVMNQTSPDK------SLDTCLTQVDKMSESDKLKRCASSEQGDNLL 177
R Q+ +K + + + +SPD+ S +C+ + D ++ES K A++E ++
Sbjct: 648 REKQELQKKVVQLAAVLSSSPDRSTVSDLSFASCIEEPDCLAESSSDKDDANTENSEDEA 707
Query: 176 ASYGDKT 156
DKT
Sbjct: 708 TKQLDKT 714
>AE013599-2202|AAF58053.1| 1173|Drosophila melanogaster CG8434-PA
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 27 RLRGRNAAHNRLQVLEGLSFD 89
RL+ N AHNRLQ L+ +FD
Sbjct: 513 RLKTLNLAHNRLQYLQENTFD 533
>U51045-1|AAB01144.1| 548|Drosophila melanogaster alpha esterase
protein.
Length = 548
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 281 SPDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLL-ASYGDKTDAVMXPXAF 129
S ++ LD C+ Q M E K + CA LL ++G++ +M +F
Sbjct: 270 SAEEHLDDCVFQFGPMVEPYKTEHCALPNHPQELLDKAWGNRIPVLMSGTSF 321
>BT001581-1|AAN71336.1| 543|Drosophila melanogaster RE24420p
protein.
Length = 543
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 281 SPDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLL-ASYGDKTDAVMXPXAF 129
S ++ LD C+ Q M E K + CA LL ++G++ +M +F
Sbjct: 270 SAEEHLDDCVFQFGPMVEPYKTEHCALPNHPQELLDKAWGNRIPVLMSGTSF 321
>AY069743-1|AAL39888.1| 543|Drosophila melanogaster LP07235p
protein.
Length = 543
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 281 SPDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLL-ASYGDKTDAVMXPXAF 129
S ++ LD C+ Q M E K + CA LL ++G++ +M +F
Sbjct: 270 SAEEHLDDCVFQFGPMVEPYKTEHCALPNHPQELLDKAWGNRIPVLMSGTSF 321
>AE014297-630|AAF54004.2| 543|Drosophila melanogaster CG1257-PA
protein.
Length = 543
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 281 SPDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLL-ASYGDKTDAVMXPXAF 129
S ++ LD C+ Q M E K + CA LL ++G++ +M +F
Sbjct: 270 SAEEHLDDCVFQFGPMVEPYKTEHCALPNHPQELLDKAWGNRIPVLMSGTSF 321
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,881,932
Number of Sequences: 53049
Number of extensions: 303655
Number of successful extensions: 1040
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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