Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10a16
         (473 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102667-1|AAM27496.1|  128|Drosophila melanogaster GM01757p pro...    89   2e-18
AE014296-1375|AAG22323.1|  128|Drosophila melanogaster CG18767-P...    89   2e-18
BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p pro...    28   7.4  
AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-P...    28   7.4  
AY070579-1|AAL48050.1|  241|Drosophila melanogaster RE63573p pro...    27   9.8  
AY060468-1|AAL25507.1|  119|Drosophila melanogaster SD05282p pro...    27   9.8  
AE014297-3976|AAF56608.2|  241|Drosophila melanogaster CG31080-P...    27   9.8  
AE013599-3898|AAF47226.2|  156|Drosophila melanogaster CG13586-P...    27   9.8  

>AY102667-1|AAM27496.1|  128|Drosophila melanogaster GM01757p
           protein.
          Length = 128

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 37/73 (50%), Positives = 51/73 (69%)
 Frame = -3

Query: 261 TNFVKPVIPLVTQISGIKIKGRVRRRCRSCYFVFRDERVYIMCSKFPRHKQMSMKPKPHN 82
           +  + P   LV Q++G K+KGR++RRC+ CY V R ER Y++C   PRHKQMSMK + + 
Sbjct: 54  SGLLTPGSTLVQQVAGFKVKGRLKRRCKDCYIVVRQERGYVICPTHPRHKQMSMKKRDYK 113

Query: 81  TWILTQASQSPVR 43
           +WILT A+QS  R
Sbjct: 114 SWILTHATQSKER 126


>AE014296-1375|AAG22323.1|  128|Drosophila melanogaster CG18767-PA
           protein.
          Length = 128

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 37/73 (50%), Positives = 51/73 (69%)
 Frame = -3

Query: 261 TNFVKPVIPLVTQISGIKIKGRVRRRCRSCYFVFRDERVYIMCSKFPRHKQMSMKPKPHN 82
           +  + P   LV Q++G K+KGR++RRC+ CY V R ER Y++C   PRHKQMSMK + + 
Sbjct: 54  SGLLTPGSTLVQQVAGFKVKGRLKRRCKDCYIVVRQERGYVICPTHPRHKQMSMKKRDYK 113

Query: 81  TWILTQASQSPVR 43
           +WILT A+QS  R
Sbjct: 114 SWILTHATQSKER 126


>BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p protein.
          Length = 1215

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -3

Query: 192  RRRCRSCYFVFRDERVYIMCSKFPR 118
            RRR   CY V  DE +Y  C    R
Sbjct: 1167 RRRIEECYTVHEDEELYTYCGNASR 1191


>AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-PB,
            isoform B protein.
          Length = 1170

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -3

Query: 192  RRRCRSCYFVFRDERVYIMCSKFPR 118
            RRR   CY V  DE +Y  C    R
Sbjct: 1122 RRRIEECYTVHEDEELYTYCGNASR 1146


>AY070579-1|AAL48050.1|  241|Drosophila melanogaster RE63573p
           protein.
          Length = 241

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -3

Query: 354 MQKLFSLVKVANSLIGGNVLPILNRISQPSVTNFVKPVIP 235
           +Q  +  +  +++++ G V P+LN  SQP+      P  P
Sbjct: 188 IQSQYDQLGGSSTILNGGVAPVLNFASQPAAQQVAAPSAP 227


>AY060468-1|AAL25507.1|  119|Drosophila melanogaster SD05282p
           protein.
          Length = 119

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 198 RVRRRCRSCYFVFRDERVYIMCSK 127
           R+ R C  CY +FR+  ++ +C K
Sbjct: 51  RLDRICEDCYQLFRETSIHRLCKK 74


>AE014297-3976|AAF56608.2|  241|Drosophila melanogaster CG31080-PA
           protein.
          Length = 241

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -3

Query: 354 MQKLFSLVKVANSLIGGNVLPILNRISQPSVTNFVKPVIP 235
           +Q  +  +  +++++ G V P+LN  SQP+      P  P
Sbjct: 188 IQSQYDQLGGSSTILNGGVAPVLNFASQPAAQQVAAPSAP 227


>AE013599-3898|AAF47226.2|  156|Drosophila melanogaster CG13586-PA,
           isoform A protein.
          Length = 156

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 198 RVRRRCRSCYFVFRDERVYIMCSK 127
           R+ R C  CY +FR+  ++ +C K
Sbjct: 88  RLDRICEDCYQLFRETSIHRLCKK 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,995,130
Number of Sequences: 53049
Number of extensions: 390660
Number of successful extensions: 764
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)