Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10a15
         (862 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    29   0.14 
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    25   2.2  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   5.2  
DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.        24   6.8  
AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.      24   6.8  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
            symporter protein.
          Length = 1127

 Score = 29.5 bits (63), Expect = 0.14
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
 Frame = -1

Query: 541  RLSNGVGRASTPGSPTIRHRND----ILMNSSRASTFSHGLDNISLMSMNFSHYELMRNL 374
            R+  G   +   G  T++  ++    ++ N S     SH      + S++ S   L RN+
Sbjct: 817  RVGKGFDYSQVLGEDTVKFISEYPRTLVANDSTNDLLSHN----KVSSLHGSCDSLSRNV 872

Query: 373  SQANSNSDGTFSGSNCNTATRPVDLNEK 290
            SQA+S SD        + A  P+D+N K
Sbjct: 873  SQASSTSD---LSKTISVAPDPIDINAK 897


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 259 HYGNISPSVRFFRSDRQAALR 321
           HYGN+ P  RF+  D    +R
Sbjct: 145 HYGNLVPCARFYPEDETRFVR 165


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 236 VPIAPYFRTTEISLQVFVFFVQ 301
           +P+ P F TT I++  F  F+Q
Sbjct: 620 IPLQPMFLTTTIAVVYFTVFLQ 641


>DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.
          Length = 93

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +1

Query: 403 SSLTLKIYCLIRG 441
           SS+T K+YC+I+G
Sbjct: 51  SSITCKMYCVIKG 63


>AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.
          Length = 80

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +1

Query: 403 SSLTLKIYCLIRG 441
           SS+T K+YC+I+G
Sbjct: 38  SSITCKMYCVIKG 50


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 860,685
Number of Sequences: 2352
Number of extensions: 15818
Number of successful extensions: 55
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)