Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10a14
         (816 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.30 
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    26   1.2  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         25   2.8  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   6.4  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   6.4  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   8.5  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 0.30
 Identities = 10/42 (23%), Positives = 25/42 (59%)
 Frame = -3

Query: 538 QHKQNEHQKIFDKRVELEETLEKHQKLIQNWQKFKDDREEAR 413
           Q +Q + Q+   +R + ++  ++HQ+  Q WQ+ +  +++ R
Sbjct: 339 QQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPR 380


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 67  YLLIMLFLVFMFCYLFN 17
           YLL+M   VF+FCY+ N
Sbjct: 324 YLLVMTSQVFIFCYVGN 340


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 556 FPYLRRICSSTIQLSRKFLRSLYLGAVQFRGGLFAHCPFCVYSTLWNS 699
           +P +RR+ S      R F+    L  VQ+ GG FA C   +   L+N+
Sbjct: 121 WPVVRRMVSF-----RNFVAPAPLTNVQYSGGTFAFCRGAIGFALFNA 163


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 28/140 (20%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
 Frame = -3

Query: 805 DSAINAEARSRYMDGWQRARTEQHVQMINDVE---ASPTNSIEYYKHRMDSEQRVHHEIE 635
           D A+    ++R  D   +A  ++ V  + +VE   A+  N +     +  S   VH E +
Sbjct: 323 DGALKTLEQARRADEAHQADIKKLVDELQEVEVKRAAFENEVAGESKKRGSN--VHLERD 380

Query: 634 LLLNIKIGEIFAKVESWMNKYDADMEKIELKIQHKQNEHQKIFDKRVELEETLEKHQKLI 455
           L+   +   +  K ++  +KY   ++ +  + +  Q+      +K+ ++EE         
Sbjct: 381 LVQ--EYDRLKQKADATSSKYLIHLDSVNREQKSDQDRLDSEINKKAQIEE--------- 429

Query: 454 QNWQKFKDDREEARLFEEKM 395
            N++K + ++ EA   +EK+
Sbjct: 430 -NYKKIESEKNEALKRQEKL 448


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 13/57 (22%), Positives = 33/57 (57%)
 Frame = -3

Query: 565 DMEKIELKIQHKQNEHQKIFDKRVELEETLEKHQKLIQNWQKFKDDREEARLFEEKM 395
           ++E ++  IQ  + ++ ++ ++   L E + +  +L+Q      +++EEA+  EEK+
Sbjct: 92  ELELLKATIQQLEEQNLEMKEQNFRLAEQITRMCQLLQ------EEKEEAKRREEKL 142


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = -3

Query: 538 QHKQNEHQKIFDK----RVELEETLEKHQKLIQNWQKFKDDREEARLF 407
           +  + EH ++ DK      E+E+ LE  +      +K +DD +E   F
Sbjct: 301 EKNREEHAQVLDKIWLKEREIEQELEAERAFWVARRKVRDDDDEVSTF 348


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,667
Number of Sequences: 2352
Number of extensions: 12223
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)