Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10a13
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    29   0.24 
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    29   0.24 
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    29   0.24 
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    25   2.3  
AY146726-1|AAO12086.1|  136|Anopheles gambiae odorant-binding pr...    25   3.0  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   5.3  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   7.0  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 28.7 bits (61), Expect = 0.24
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 254 TKKRSEKIKSVAELNRRSLTEAEREYLCLFTDWTEHEDP 138
           T  R E +++V ELN      A +  +  +TDWTE ++P
Sbjct: 506 TVTREEFLQAVRELNPYVNGAARQAIVFEYTDWTEPDNP 544


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 28.7 bits (61), Expect = 0.24
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 254 TKKRSEKIKSVAELNRRSLTEAEREYLCLFTDWTEHEDP 138
           T  R E +++V ELN      A +  +  +TDWTE ++P
Sbjct: 506 TVTREEFLQAVRELNPYVNGAARQAIVFEYTDWTEPDNP 544


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 0.24
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 254 TKKRSEKIKSVAELNRRSLTEAEREYLCLFTDWTEHEDP 138
           T  R E +++V ELN      A +  +  +TDWTE ++P
Sbjct: 392 TVTREEFLQAVRELNPYVNGAARQAIVFEYTDWTEPDNP 430


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -3

Query: 578 LKSCLDFCYEKVYSERPLNLEMITIAKTLENSYFNYCSRIDVIRNVTI 435
           L+ CL F     YSE  +      + + +E+ +F Y S++   ++VT+
Sbjct: 36  LEECLKFLDSFHYSETDIEYLKHALPQGIEDEFFEYLSQL-TAKDVTL 82


>AY146726-1|AAO12086.1|  136|Anopheles gambiae odorant-binding
           protein AgamOBP19 protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 625 KTLKNFISNCE--HRSSLKSRRLLNFSIVEATESVSCFINCFNSMMRSCR 768
           KT + F   C+  H+ S +    +N  +   T+   C+++C   +M+  R
Sbjct: 24  KTARTFRQVCQPKHKISDEVADAVNRGVFADTKDFKCYVSCLLDIMQVAR 73


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = -3

Query: 242 SEKIKSVAELNRRSLTEAEREYLCLFTD-------WTEHEDPAVYLKSLSFSK 105
           S +   VAE   R+L E  R   C+  D       W E  + AVYL+++S S+
Sbjct: 171 SPQQNGVAERKNRTLVEMAR---CMLIDAKLGYRFWAEAINAAVYLQNISSSR 220


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = -3

Query: 425 IQRCEEVEKKKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFRNEKTK- 249
           IQ CE+   ++L       + +Q ++  Q+ L  AF+     +    +L +V+     + 
Sbjct: 158 IQECEQDHVQRLSNQRSHYKRIQCYSLKQRSLVDAFQKTI--RKAEEVLNLVYNKYIFEW 215

Query: 248 KRSEKIKSVAELNRRSLTEAEREY 177
           ++++    V   N  SL E +  Y
Sbjct: 216 QKTQMFPEVRSTNAYSLDEIQTWY 239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,925
Number of Sequences: 2352
Number of extensions: 15035
Number of successful extensions: 112
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)