Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10a13
(874 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118691-1|AAM50551.1| 1230|Drosophila melanogaster AT16851p pro... 33 0.39
AE014297-3462|AAN13982.2| 1230|Drosophila melanogaster CG6129-PC... 33 0.39
AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB... 33 0.39
AE014297-3135|AAF55980.2| 744|Drosophila melanogaster CG7069-PA... 33 0.68
BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p pro... 31 2.7
AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-P... 31 2.7
BT003314-1|AAO25074.1| 1430|Drosophila melanogaster GH02877p pro... 30 3.6
AE014134-1128|AAF52413.2| 1257|Drosophila melanogaster CG11098-P... 30 3.6
AE014134-1127|AAF52414.2| 1430|Drosophila melanogaster CG11098-P... 30 3.6
BT022798-1|AAY55214.1| 562|Drosophila melanogaster IP13650p pro... 29 8.4
BT022774-1|AAY55190.1| 420|Drosophila melanogaster IP13950p pro... 29 8.4
BT022766-1|AAY55182.1| 560|Drosophila melanogaster IP13850p pro... 29 8.4
AE014296-2087|AAF49969.1| 564|Drosophila melanogaster CG6793-PA... 29 8.4
>AY118691-1|AAM50551.1| 1230|Drosophila melanogaster AT16851p
protein.
Length = 1230
Score = 33.5 bits (73), Expect = 0.39
Identities = 44/193 (22%), Positives = 82/193 (42%)
Frame = -3
Query: 758 RIIELKQLMKQDTDSVASTIEKFNSLLLFNEERCSQLEMKFFKVLNESFYDDVGAFHVLK 579
R+ EL ++ + +S+ S + N+ L EER SQLE + L ++ HV +
Sbjct: 56 RLNELLAALRSEKESLESVLFDTNTSLEATEERRSQLERDLQEAL---VREESLKNHVAR 112
Query: 578 LKSCLDFCYEKVYSERPLNLEMITIAKTLENSYFNYCSRIDVIRNVTIRNAIQRCEEVEK 399
L+ L+ C K + +++ A+ E+ + N I N +Q C E
Sbjct: 113 LQKELEQCQRKAQETK---TQLLNAARAAESDF-----------NQKIAN-LQACAEEAA 157
Query: 398 KKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFRNEKTKKRSEKIKSVA 219
K+ + LQ+ N L+K + +A + +K+ I E+ ++S+
Sbjct: 158 KR-----HGEEILQLRNALEKRMQQALQALQTAKDD----EIEKLQERLATLQAHLESLV 208
Query: 218 ELNRRSLTEAERE 180
+ + +L AE E
Sbjct: 209 QQHEEALIRAESE 221
>AE014297-3462|AAN13982.2| 1230|Drosophila melanogaster CG6129-PC,
isoform C protein.
Length = 1230
Score = 33.5 bits (73), Expect = 0.39
Identities = 44/193 (22%), Positives = 82/193 (42%)
Frame = -3
Query: 758 RIIELKQLMKQDTDSVASTIEKFNSLLLFNEERCSQLEMKFFKVLNESFYDDVGAFHVLK 579
R+ EL ++ + +S+ S + N+ L EER SQLE + L ++ HV +
Sbjct: 56 RLNELLAALRSEKESLESVLFDTNTSLEATEERRSQLERDLQEAL---VREESLKNHVAR 112
Query: 578 LKSCLDFCYEKVYSERPLNLEMITIAKTLENSYFNYCSRIDVIRNVTIRNAIQRCEEVEK 399
L+ L+ C K + +++ A+ E+ + N I N +Q C E
Sbjct: 113 LQKELEQCQRKAQETK---TQLLNAARAAESDF-----------NQKIAN-LQACAEEAA 157
Query: 398 KKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFRNEKTKKRSEKIKSVA 219
K+ + LQ+ N L+K + +A + +K+ I E+ ++S+
Sbjct: 158 KR-----HGEEILQLRNALEKRMQQALQALQTAKDD----EIEKLQERLATLQAHLESLV 208
Query: 218 ELNRRSLTEAERE 180
+ + +L AE E
Sbjct: 209 QQHEEALIRAESE 221
>AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB,
isoform B protein.
Length = 2048
Score = 33.5 bits (73), Expect = 0.39
Identities = 44/193 (22%), Positives = 82/193 (42%)
Frame = -3
Query: 758 RIIELKQLMKQDTDSVASTIEKFNSLLLFNEERCSQLEMKFFKVLNESFYDDVGAFHVLK 579
R+ EL ++ + +S+ S + N+ L EER SQLE + L ++ HV +
Sbjct: 874 RLNELLAALRSEKESLESVLFDTNTSLEATEERRSQLERDLQEAL---VREESLKNHVAR 930
Query: 578 LKSCLDFCYEKVYSERPLNLEMITIAKTLENSYFNYCSRIDVIRNVTIRNAIQRCEEVEK 399
L+ L+ C K + +++ A+ E+ + N I N +Q C E
Sbjct: 931 LQKELEQCQRKAQETK---TQLLNAARAAESDF-----------NQKIAN-LQACAEEAA 975
Query: 398 KKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFRNEKTKKRSEKIKSVA 219
K+ + LQ+ N L+K + +A + +K+ I E+ ++S+
Sbjct: 976 KR-----HGEEILQLRNALEKRMQQALQALQTAKDD----EIEKLQERLATLQAHLESLV 1026
Query: 218 ELNRRSLTEAERE 180
+ + +L AE E
Sbjct: 1027 QQHEEALIRAESE 1039
>AE014297-3135|AAF55980.2| 744|Drosophila melanogaster CG7069-PA
protein.
Length = 744
Score = 32.7 bits (71), Expect = 0.68
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = -3
Query: 470 CSRIDVIRNVTIRNAIQRCEEVEKKKLQRAYEANQE-LQIFNRLQKHLTRAFEPKY---D 303
C + D R ++ EE K KL + N+E L+I L A + K +
Sbjct: 586 CRKADEERRKEEAEKCRKLEEDRKCKLAEEKKRNEEELKIIEAEVAKLEAAEKAKRLKEE 645
Query: 302 SKNKLSLLPIVFRNEKTKKRSEKIKSVAELNRRSLTEAEREY 177
K K L+ RNE KKR E + + R L E E ++
Sbjct: 646 EKKKEELMKCKQRNEAKKKREEAERCKRKERERELAEMENKW 687
>BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p protein.
Length = 1767
Score = 30.7 bits (66), Expect = 2.7
Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 8/204 (3%)
Frame = -3
Query: 767 LQERIIELKQLMKQDTDSVASTIEKFNSLLLFNEERCSQLEMKFFKVLNESFYDDVGAFH 588
LQ R+ +D + + ++ F E+R ++E + + L + +
Sbjct: 1471 LQGRLETFVDWCTKDLKEKQEYVARKSAKKFFMEDRAREMEQRVHQYLGRPIEETIADED 1530
Query: 587 VLKLKSCLDFCYEKVYSER--------PLNLEMITIAKTLENSYFNYCSRIDVIRNVTIR 432
K ++ L + +V + P +M+ + + +D+ + ++
Sbjct: 1531 FNKHRAVLAEVWRRVVPDSVRGTSDVLPSAADMVAAISDVVMEILSKFEHMDIEKVRSVE 1590
Query: 431 NAIQRCEEVEKKKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFRNEKT 252
+++ +K +AY+ + + + K + R EP Y + LP ++ +K
Sbjct: 1591 ATLRKRRRYREKLSYQAYQVERRIDME---MKKVRRNLEPPYQKPKREGRLPRLYLKKKI 1647
Query: 251 KKRSEKIKSVAELNRRSLTEAERE 180
+++ ++E N ++ A RE
Sbjct: 1648 IPEEKEVMVISE-NTKNFVRAFRE 1670
>AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-PA
protein.
Length = 1767
Score = 30.7 bits (66), Expect = 2.7
Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 8/204 (3%)
Frame = -3
Query: 767 LQERIIELKQLMKQDTDSVASTIEKFNSLLLFNEERCSQLEMKFFKVLNESFYDDVGAFH 588
LQ R+ +D + + ++ F E+R ++E + + L + +
Sbjct: 1471 LQGRLETFVDWCTKDLKEKQEYVARKSAKKFFMEDRAREMEQRVHQYLGRPIEETIADED 1530
Query: 587 VLKLKSCLDFCYEKVYSER--------PLNLEMITIAKTLENSYFNYCSRIDVIRNVTIR 432
K ++ L + +V + P +M+ + + +D+ + ++
Sbjct: 1531 FNKHRAVLAEVWRRVVPDSVRGTSDVLPSAADMVAAISDVVMEILSKFEHMDIEKVRSVE 1590
Query: 431 NAIQRCEEVEKKKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFRNEKT 252
+++ +K +AY+ + + + K + R EP Y + LP ++ +K
Sbjct: 1591 ATLRKRRRYREKLSYQAYQVERRIDME---MKKVRRNLEPPYQKPKREGRLPRLYLKKKI 1647
Query: 251 KKRSEKIKSVAELNRRSLTEAERE 180
+++ ++E N ++ A RE
Sbjct: 1648 IPEEKEVMVISE-NTKNFVRAFRE 1670
>BT003314-1|AAO25074.1| 1430|Drosophila melanogaster GH02877p
protein.
Length = 1430
Score = 30.3 bits (65), Expect = 3.6
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = -3
Query: 413 EEVEKKKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFRNEKTKKRSEK 234
EE EK++L E + LQ QK L E +K L R ++ ++ ++
Sbjct: 499 EEQEKQRLVAEAEEQKRLQEEADQQKRLQ---EEAALNKRLLEEAEQQKRLQEEAEQQKR 555
Query: 233 IKSVAELNRRSLTEAERE 180
++ AELN+R L EAE++
Sbjct: 556 LQEEAELNKRLLEEAEKQ 573
>AE014134-1128|AAF52413.2| 1257|Drosophila melanogaster CG11098-PB,
isoform B protein.
Length = 1257
Score = 30.3 bits (65), Expect = 3.6
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = -3
Query: 413 EEVEKKKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFRNEKTKKRSEK 234
EE EK++L E + LQ QK L E +K L R ++ ++ ++
Sbjct: 499 EEQEKQRLVAEAEEQKRLQEEADQQKRLQ---EEAALNKRLLEEAEQQKRLQEEAEQQKR 555
Query: 233 IKSVAELNRRSLTEAERE 180
++ AELN+R L EAE++
Sbjct: 556 LQEEAELNKRLLEEAEKQ 573
>AE014134-1127|AAF52414.2| 1430|Drosophila melanogaster CG11098-PA,
isoform A protein.
Length = 1430
Score = 30.3 bits (65), Expect = 3.6
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = -3
Query: 413 EEVEKKKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFRNEKTKKRSEK 234
EE EK++L E + LQ QK L E +K L R ++ ++ ++
Sbjct: 499 EEQEKQRLVAEAEEQKRLQEEADQQKRLQ---EEAALNKRLLEEAEQQKRLQEEAEQQKR 555
Query: 233 IKSVAELNRRSLTEAERE 180
++ AELN+R L EAE++
Sbjct: 556 LQEEAELNKRLLEEAEKQ 573
>BT022798-1|AAY55214.1| 562|Drosophila melanogaster IP13650p
protein.
Length = 562
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -3
Query: 434 RNAIQRCEEVEKKKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFR--N 261
R A+QR EE KK ++ E ++ L RLQ H T + + + + + + +
Sbjct: 360 RLAVQREEEGLAKKSRQKAEEDRRLAEEQRLQNHQTNVQFKRQQREEHIQRIRKLRQDLD 419
Query: 260 EKTKKR-SEKIKSVAELNRRSLTEAERE 180
E+ KKR E+ + NR + E RE
Sbjct: 420 EQVKKRIEEETRPGTNYNREAQLEELRE 447
>BT022774-1|AAY55190.1| 420|Drosophila melanogaster IP13950p
protein.
Length = 420
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -3
Query: 434 RNAIQRCEEVEKKKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFR--N 261
R A+QR EE KK ++ E ++ L RLQ H T + + + + + + +
Sbjct: 218 RLAVQREEEGLAKKSRQKAEEDRRLAEEQRLQNHQTNVQFKRQQREEHIQRIRKLRQDLD 277
Query: 260 EKTKKR-SEKIKSVAELNRRSLTEAERE 180
E+ KKR E+ + NR + E RE
Sbjct: 278 EQVKKRIEEETRPGTNYNREAQLEELRE 305
>BT022766-1|AAY55182.1| 560|Drosophila melanogaster IP13850p
protein.
Length = 560
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -3
Query: 434 RNAIQRCEEVEKKKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFR--N 261
R A+QR EE KK ++ E ++ L RLQ H T + + + + + + +
Sbjct: 358 RLAVQREEEGLAKKSRQKAEEDRRLAEEQRLQNHQTNVQFKRQQREEHIQRIRKLRQDLD 417
Query: 260 EKTKKR-SEKIKSVAELNRRSLTEAERE 180
E+ KKR E+ + NR + E RE
Sbjct: 418 EQVKKRIEEETRPGTNYNREAQLEELRE 445
>AE014296-2087|AAF49969.1| 564|Drosophila melanogaster CG6793-PA
protein.
Length = 564
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -3
Query: 434 RNAIQRCEEVEKKKLQRAYEANQELQIFNRLQKHLTRAFEPKYDSKNKLSLLPIVFR--N 261
R A+QR EE KK ++ E ++ L RLQ H T + + + + + + +
Sbjct: 362 RLAVQREEEGLAKKSRQKAEEDRRLAEEQRLQNHQTNVQFKRQQREEHIQRIRKLRQDLD 421
Query: 260 EKTKKR-SEKIKSVAELNRRSLTEAERE 180
E+ KKR E+ + NR + E RE
Sbjct: 422 EQVKKRIEEETRPGTNYNREAQLEELRE 449
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,026,088
Number of Sequences: 53049
Number of extensions: 595346
Number of successful extensions: 1917
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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