Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10a11
(495 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY752905-1|AAV30079.1| 100|Anopheles gambiae peroxidase 11 prot... 27 0.46
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 25 1.4
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 25 1.4
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 25 1.4
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 25 1.4
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 25 1.4
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 25 1.4
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 24 2.5
AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450 CY... 24 3.3
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 4.3
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 23 7.6
AY907825-1|AAX92637.1| 67|Anopheles gambiae antimicrobial pept... 22 10.0
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 22 10.0
AY187040-1|AAO39754.1| 211|Anopheles gambiae putative antennal ... 22 10.0
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 22 10.0
>AY752905-1|AAV30079.1| 100|Anopheles gambiae peroxidase 11
protein.
Length = 100
Score = 26.6 bits (56), Expect = 0.46
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 267 TYNLNFIVFANRHGFYIEFLS*FLRQGRGHQHSPY 371
T+ L ++FA R+ F + S +++GR H PY
Sbjct: 27 TFGLTRLLFAGRNPFGSDLASLNIQRGRDHALRPY 61
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.0 bits (52), Expect = 1.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 63 QSALCSAIEDCFAVFIH 113
Q ALCS+ EDC +H
Sbjct: 65 QPALCSSYEDCIRCAVH 81
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.0 bits (52), Expect = 1.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 63 QSALCSAIEDCFAVFIH 113
Q ALCS+ EDC +H
Sbjct: 65 QPALCSSYEDCIRCAVH 81
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.0 bits (52), Expect = 1.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 63 QSALCSAIEDCFAVFIH 113
Q ALCS+ EDC +H
Sbjct: 65 QPALCSSYEDCIRCAVH 81
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.0 bits (52), Expect = 1.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 63 QSALCSAIEDCFAVFIH 113
Q ALCS+ EDC +H
Sbjct: 65 QPALCSSYEDCIRCAVH 81
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 25.0 bits (52), Expect = 1.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 342 QGRGHQHSPYM*RSTEMPLPVFPS*G 419
Q GH HS +S +P+PVF G
Sbjct: 150 QAAGHLHSSVSEKSKTVPVPVFQKVG 175
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 25.0 bits (52), Expect = 1.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 63 QSALCSAIEDCFAVFIH 113
Q ALCS+ EDC +H
Sbjct: 641 QPALCSSYEDCIRCAVH 657
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 24.2 bits (50), Expect = 2.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 313 TLNFCLSSLDRGEDINTRL 369
T+NFCL L + DI RL
Sbjct: 319 TMNFCLYELAKNPDIQGRL 337
>AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450
CYP6P2 protein.
Length = 507
Score = 23.8 bits (49), Expect = 3.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 313 TLNFCLSSLDRGEDINTRL 369
T+NFCL L + DI RL
Sbjct: 320 TMNFCLYELAKHPDIQERL 338
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 23.4 bits (48), Expect = 4.3
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 168 CNSICRHSPFKVCDCQVE 115
C ++C F CDC++E
Sbjct: 740 CFALCHCCDFYACDCKME 757
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 204 YNKLFTIHLHHFANLLAFVVSTYNLNFIVF 293
+N+L+TI LH F A +N + F
Sbjct: 433 HNQLYTIELHAFKQTTALHTLHLQVNQLAF 462
>AY907825-1|AAX92637.1| 67|Anopheles gambiae antimicrobial peptide
defensin 3 protein.
Length = 67
Score = 22.2 bits (45), Expect = 10.0
Identities = 9/35 (25%), Positives = 15/35 (42%)
Frame = -1
Query: 213 VCCIH*EDSKRKGQWCNSICRHSPFKVCDCQVEDE 109
+ C+ E K +C ++C S C +DE
Sbjct: 27 LACVTNEGPKWANTYCAAVCHMSGRGAGSCNAKDE 61
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 22.2 bits (45), Expect = 10.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 152 GIHPSKCVIVK 120
G HPSKCV ++
Sbjct: 64 GAHPSKCVTIQ 74
>AY187040-1|AAO39754.1| 211|Anopheles gambiae putative antennal
carrier protein A5 protein.
Length = 211
Score = 22.2 bits (45), Expect = 10.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 467 VVLAKSDRMKFNKQVTSSRRKNR 399
+V + R+ FN+ V SSR NR
Sbjct: 147 LVYKQPSRIVFNETVLSSRNPNR 169
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 22.2 bits (45), Expect = 10.0
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = -1
Query: 168 CNSICRHSPFKVCDCQV 118
C ++C F CDC++
Sbjct: 776 CFALCHCCEFDACDCEM 792
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,868
Number of Sequences: 2352
Number of extensions: 11194
Number of successful extensions: 29
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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