Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10a06
         (845 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         27   0.95 
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   8.8  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   8.8  

>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 26.6 bits (56), Expect = 0.95
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 223 LSSFVFKYSTSIFFTFICYCCMFRKQFIF 137
           LSS   K STS+ F F+C C    ++ I+
Sbjct: 50  LSSSSCKQSTSLSFVFLCCCVPSSERLIY 78


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 274 IIMDVCYDYPNRVIQDRRQTDAQQKIAQREYAFR 375
           IIM  CY   +  + DR +T    K ++RE A R
Sbjct: 282 IIMAFCYICVSIRLNDRARTKPGSKTSRREEADR 315


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 132 H*KINCFRNIQQ*QINVKKIEVEYLNT 212
           H  +NC +N Q    NV +++  Y NT
Sbjct: 37  HHGLNCVQNRQNRFANVVQVKATYANT 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,854
Number of Sequences: 2352
Number of extensions: 14729
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)