Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10a04
         (820 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.9  
AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450 pr...    24   6.5  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    24   6.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.6  
AY045760-3|AAK84944.1|  168|Anopheles gambiae D7-related 2 prote...    23   8.6  
AJ133853-1|CAB39728.1|  168|Anopheles gambiae D7-related 2 prote...    23   8.6  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 271 CLPVSSIHLLIWIFSVFLLHSV-YTFFLR*VSSAP 372
           CL  SS+ L I    +FLLH V ++F     S AP
Sbjct: 43  CLECSSVPLFINFIFMFLLHFVLFSFSFPFFSFAP 77


>AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -1

Query: 496 HIPTGTVIKCHTS-RC-QDDNRKKARELLIEK 407
           H+  GT++ CHT   C  +DN ++A   L ++
Sbjct: 6   HLQAGTLVLCHTRVACLSEDNFQQADRFLPDR 37


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = -1

Query: 712 PCCREGQLCDMFLLTSKYFRNFSPRLAAAFKHTIDYSKVPKINECELSEKFV 557
           P C   QL D      +  R   P  A  F +      VPK     +SE++V
Sbjct: 96  PTCGAQQLADRIYFGEETERGAHPWAALLFYNVGRNRTVPKCGGALISERYV 147


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 415  IEKLDD-MINGPESVSAQRKLIEEKKYKRNATKKQKISKLK 296
            + +LD  +IN  + +   + +++EK  K     K+K+ K+K
Sbjct: 2881 LNRLDKFVINKMDKIKDMKMVLKEKNLKFITQIKEKVGKMK 2921


>AY045760-3|AAK84944.1|  168|Anopheles gambiae D7-related 2 protein
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 631 AAFKHTIDYSKVPKINECELSEKF 560
           A FK+ +DY+++ K  + + S+ F
Sbjct: 128 AGFKNAVDYNELLKAGKMQTSDPF 151


>AJ133853-1|CAB39728.1|  168|Anopheles gambiae D7-related 2 protein
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 631 AAFKHTIDYSKVPKINECELSEKF 560
           A FK+ +DY+++ K  + + S+ F
Sbjct: 128 AGFKNAVDYNELLKAGKMQTSDPF 151


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,017
Number of Sequences: 2352
Number of extensions: 17210
Number of successful extensions: 290
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 290
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)