Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10a02
(814 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 23 2.9
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 22 5.0
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 22 5.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 5.0
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 22 5.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 5.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 5.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 5.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 22 6.7
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 22 6.7
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 22 6.7
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 22 6.7
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 8.8
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 23.0 bits (47), Expect = 2.9
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 392 DKACAKSIETANCGIQIQKSTELINSNKKKIRAQCAQQCLP 270
D+ +S N + Q+ +LIN KK+ A Q P
Sbjct: 338 DQGTVESFVCVNTLVSEQEGLQLINEMKKRYSALINSQSCP 378
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 281 QCLPQNNHNRESIKCLWESTV 219
QC P ++RE+ C+W V
Sbjct: 123 QCSPGLAYDREARVCMWADQV 143
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 281 QCLPQNNHNRESIKCLWESTV 219
QC P ++RE+ C+W V
Sbjct: 123 QCSPGLAYDREARVCMWADQV 143
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 85 YTLHYKPTLKKIWHF*KSGPRI 150
YT+HYKP W + GP +
Sbjct: 1429 YTIHYKPEFGD-WETVQIGPTV 1449
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 744 WTIVCLHYVIAKLLCTPGTFN 806
W +VI +LC+PG F+
Sbjct: 212 WMQKATEHVIGCVLCSPGCFS 232
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 744 WTIVCLHYVIAKLLCTPGTFN 806
W +VI +LC+PG F+
Sbjct: 526 WMQKATEHVIGCVLCSPGCFS 546
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 744 WTIVCLHYVIAKLLCTPGTFN 806
W +VI +LC+PG F+
Sbjct: 786 WLQKATEHVIGCVLCSPGCFS 806
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 744 WTIVCLHYVIAKLLCTPGTFN 806
W +VI +LC+PG F+
Sbjct: 786 WLQKATEHVIGCVLCSPGCFS 806
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 744 WTIVCLHYVIAKLLCTPGTFN 806
W +VI +LC+PG F+
Sbjct: 759 WMQKATEHVIGCVLCSPGCFS 779
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 744 WTIVCLHYVIAKLLCTPGTFN 806
W +VI +LC+PG F+
Sbjct: 759 WMQKATEHVIGCVLCSPGCFS 779
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 744 WTIVCLHYVIAKLLCTPGTFN 806
W +VI +LC+PG F+
Sbjct: 786 WLQKATEHVIGCVLCSPGCFS 806
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 744 WTIVCLHYVIAKLLCTPGTFN 806
W +VI +LC+PG F+
Sbjct: 786 WLQKATEHVIGCVLCSPGCFS 806
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 447 VDLFTGASTIETISSLANQR 506
VDLF G+ST E+ NQ+
Sbjct: 95 VDLFRGSSTPESPEHYYNQK 114
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 142 DQIFKNAKFFLTSVCN 95
D++F+NA+FF + N
Sbjct: 428 DKVFENARFFTDCIKN 443
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 21.8 bits (44), Expect = 6.7
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -1
Query: 718 SVKLPSKVQTKLMEKFIARXXXXXXXXXXXLHHTLKTSKENLRKNLIKK 572
S ++ KV K +KF R HTL SK+ + +NL K
Sbjct: 81 SPEILRKVLVKDFDKFTNRNIATNESADPLAFHTLFISKDAVWRNLRTK 129
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 763 CRQTIVQTQHHLE*NSVKLPSKVQTKLMEKFIA 665
C Q + + +H + N +PS+ Q ++ IA
Sbjct: 355 CSQKVAEERHKTDINITTVPSEQQWGILVLIIA 387
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +2
Query: 452 LVYWGIYN*DYLLACESASHTRYHTSKDQLQGY 550
++ W + D+ +C S + + + +L+GY
Sbjct: 854 IMIWSVDMDDFRGSCGSGKYPLINAMRQELEGY 886
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,403
Number of Sequences: 336
Number of extensions: 4125
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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