Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10a02
         (814 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    27   0.52 
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    25   3.7  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   6.4  

>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 0.52
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = -3

Query: 383 CAKSIETANCGIQIQKSTELINSNKKKIRAQCAQQCLPQNNHNRESI--KCLWESTVHNK 210
           C  + E   CG     +   +N  +K    QC Q C  +    RES   KC+ + +  N 
Sbjct: 35  CGPNEEFQTCGTACPNTCADLNELQKPCTKQCIQGCFCKPGFVRESKEGKCIPKCSNENM 94

Query: 209 P 207
           P
Sbjct: 95  P 95


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 479 DYLLACESASHTRYHTSKDQLQ 544
           DYLL   S+ H  YH   D+ Q
Sbjct: 328 DYLLGLFSSKHLPYHLDADEQQ 349


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 582 KFFLRFSFDVFSVW 623
           KFFL F FD+F ++
Sbjct: 10  KFFLEFFFDIFQLY 23


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,637
Number of Sequences: 2352
Number of extensions: 17136
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)