Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10a02
(814 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025124-1|ABE73295.1| 510|Drosophila melanogaster IP09286p pro... 31 1.9
BT004502-1|AAO42666.1| 741|Drosophila melanogaster GH07373p pro... 30 4.3
AE014134-2898|AAF53643.2| 741|Drosophila melanogaster CG15151-P... 30 4.3
BT003434-1|AAO39437.1| 982|Drosophila melanogaster SD07269p pro... 29 5.7
AE014134-3343|AAF53964.2| 981|Drosophila melanogaster CG9252-PA... 29 5.7
BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p pro... 29 10.0
AY071013-1|AAL48635.1| 361|Drosophila melanogaster RE09223p pro... 29 10.0
AY051878-1|AAK93302.1| 806|Drosophila melanogaster LD37025p pro... 29 10.0
AE014297-3198|AAF56032.1| 361|Drosophila melanogaster CG6949-PA... 29 10.0
AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA... 29 10.0
>BT025124-1|ABE73295.1| 510|Drosophila melanogaster IP09286p
protein.
Length = 510
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = -3
Query: 806 IKCXRRAQKLCNDIVQADDRPNTTPP-RVKLSKITFQSTNKVNGKIYR--SVTLEKRKVT 636
+KC ++ + L N I R + P R LS T + +R S +L+ +++
Sbjct: 420 VKCNQQLELLKNHIANQSQRHSIVGPVRNSLSLDVQDFTGSGSNPEHRRRSESLDPQEII 479
Query: 635 GKPA----PHAENVKRKPEKKFNQK 573
G+P PH +++K+K +KK +K
Sbjct: 480 GRPLTSSYPHHQHMKKKKKKKKKKK 504
>BT004502-1|AAO42666.1| 741|Drosophila melanogaster GH07373p
protein.
Length = 741
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 485 LLACESASHTRYHTSKDQLQGY*LQCLQR 571
L+AC S + RY+T +D L G +CL++
Sbjct: 524 LVACFSKNRARYYTREDHLNGSESKCLEK 552
>AE014134-2898|AAF53643.2| 741|Drosophila melanogaster CG15151-PA
protein.
Length = 741
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 485 LLACESASHTRYHTSKDQLQGY*LQCLQR 571
L+AC S + RY+T +D L G +CL++
Sbjct: 524 LVACFSKNRARYYTREDHLNGSESKCLEK 552
>BT003434-1|AAO39437.1| 982|Drosophila melanogaster SD07269p
protein.
Length = 982
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -3
Query: 722 KLSKITFQSTNKVNGKIYRSVTLEKRKVTGKPAPHAENVKRKPEKKFNQKIFADIAVNTL 543
KL+ ++ V IY + LEK KV KPAP + + E NQ+ A A
Sbjct: 607 KLNAKNLKTQPSVMRSIYENEELEKNKVLAKPAPPSLVHQPLAESNRNQRDEATAARRAK 666
Query: 542 VTGPL 528
T P+
Sbjct: 667 ETFPV 671
>AE014134-3343|AAF53964.2| 981|Drosophila melanogaster CG9252-PA
protein.
Length = 981
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -3
Query: 722 KLSKITFQSTNKVNGKIYRSVTLEKRKVTGKPAPHAENVKRKPEKKFNQKIFADIAVNTL 543
KL+ ++ V IY + LEK KV KPAP + + E NQ+ A A
Sbjct: 606 KLNAKNLKTQPSVMRSIYENEELEKNKVLAKPAPPSLVHQPLAESNRNQRDEATAARRAK 665
Query: 542 VTGPL 528
T P+
Sbjct: 666 ETFPV 670
>BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p
protein.
Length = 1057
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 641 VTGKPAPHAENVKRKPEKKFNQKIFADIAVNTLVTGPLRCDN 516
V+G P AENV+ P+ Q + N +V PLRC N
Sbjct: 837 VSGNCLP-AENVRMLPKSSIPQPAVLETTHNGVVARPLRCIN 877
>AY071013-1|AAL48635.1| 361|Drosophila melanogaster RE09223p
protein.
Length = 361
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 350 IQIQKSTELINSNKKKIRAQCAQQCLPQNNHNRESIKCLWE 228
I IQ T + +K KIR +++C P+ HN + W+
Sbjct: 175 IYIQAHTHMAAKDKYKIREFVSERCYPEMMHNVKDKTIRWK 215
>AY051878-1|AAK93302.1| 806|Drosophila melanogaster LD37025p
protein.
Length = 806
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 641 VTGKPAPHAENVKRKPEKKFNQKIFADIAVNTLVTGPLRCDN 516
V+G P AENV+ P+ Q + N +V PLRC N
Sbjct: 586 VSGNCLP-AENVRMLPKNSIPQPAVLETTHNGVVARPLRCIN 626
>AE014297-3198|AAF56032.1| 361|Drosophila melanogaster CG6949-PA
protein.
Length = 361
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 350 IQIQKSTELINSNKKKIRAQCAQQCLPQNNHNRESIKCLWE 228
I IQ T + +K KIR +++C P+ HN + W+
Sbjct: 175 IYIQAHTHMAAKDKYKIREFVSERCYPEMMHNVKDKTIRWK 215
>AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA
protein.
Length = 1039
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 641 VTGKPAPHAENVKRKPEKKFNQKIFADIAVNTLVTGPLRCDN 516
V+G P AENV+ P+ Q + N +V PLRC N
Sbjct: 819 VSGNCLP-AENVRMLPKNSIPQPAVLETTHNGVVARPLRCIN 859
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,858,373
Number of Sequences: 53049
Number of extensions: 684870
Number of successful extensions: 1662
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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