Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc19c11
         (927 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11349-1|CAA72184.1|  199|Drosophila melanogaster ubiquitin conj...    37   0.034
X92838-1|CAA63424.1|  199|Drosophila melanogaster ubiquitin conj...    37   0.034
BT011418-1|AAR96210.1|   96|Drosophila melanogaster AT12021p pro...    37   0.034
AY060381-1|AAL25420.1|  199|Drosophila melanogaster LD27480p pro...    37   0.034
AE014296-1711|AAF50222.1|  199|Drosophila melanogaster CG8284-PA...    37   0.034
AY058260-1|AAL13489.1|  407|Drosophila melanogaster GH01724p pro...    29   6.8  
AE013599-417|AAF59249.1|  407|Drosophila melanogaster CG11139-PA...    29   6.8  

>Y11349-1|CAA72184.1|  199|Drosophila melanogaster ubiquitin
           conjugating enzyme protein.
          Length = 199

 Score = 37.1 bits (82), Expect = 0.034
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -2

Query: 926 MGIDEXQARVALSSYDWDLERATEQL 849
           MGIDE +AR  LS  +W+LE+ATE L
Sbjct: 172 MGIDEHEARAVLSKENWNLEKATEGL 197


>X92838-1|CAA63424.1|  199|Drosophila melanogaster ubiquitin
           conjugating enzyme protein.
          Length = 199

 Score = 37.1 bits (82), Expect = 0.034
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -2

Query: 926 MGIDEXQARVALSSYDWDLERATEQL 849
           MGIDE +AR  LS  +W+LE+ATE L
Sbjct: 172 MGIDEHEARAVLSKENWNLEKATEGL 197


>BT011418-1|AAR96210.1|   96|Drosophila melanogaster AT12021p
           protein.
          Length = 96

 Score = 37.1 bits (82), Expect = 0.034
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -2

Query: 926 MGIDEXQARVALSSYDWDLERATEQL 849
           MGIDE +AR  LS  +W+LE+ATE L
Sbjct: 69  MGIDEHEARAVLSKENWNLEKATEGL 94


>AY060381-1|AAL25420.1|  199|Drosophila melanogaster LD27480p
           protein.
          Length = 199

 Score = 37.1 bits (82), Expect = 0.034
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -2

Query: 926 MGIDEXQARVALSSYDWDLERATEQL 849
           MGIDE +AR  LS  +W+LE+ATE L
Sbjct: 172 MGIDEHEARAVLSKENWNLEKATEGL 197


>AE014296-1711|AAF50222.1|  199|Drosophila melanogaster CG8284-PA
           protein.
          Length = 199

 Score = 37.1 bits (82), Expect = 0.034
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -2

Query: 926 MGIDEXQARVALSSYDWDLERATEQL 849
           MGIDE +AR  LS  +W+LE+ATE L
Sbjct: 172 MGIDEHEARAVLSKENWNLEKATEGL 197


>AY058260-1|AAL13489.1|  407|Drosophila melanogaster GH01724p
           protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -2

Query: 923 GIDEXQARVALSSYDWDLERA 861
           G DE  AR  LSS DWD+E A
Sbjct: 16  GTDENVARFYLSSCDWDIEHA 36


>AE013599-417|AAF59249.1|  407|Drosophila melanogaster CG11139-PA
           protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -2

Query: 923 GIDEXQARVALSSYDWDLERA 861
           G DE  AR  LSS DWD+E A
Sbjct: 16  GTDENVARFYLSSCDWDIEHA 36


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,461,237
Number of Sequences: 53049
Number of extensions: 651276
Number of successful extensions: 1088
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)