Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc19c10
(871 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0166 + 18844468-18845184,18847394-18847690 117 1e-26
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 53 3e-07
11_06_0728 + 26717018-26717306,26717494-26717598,26717789-267178... 50 3e-06
04_04_0376 + 24809804-24809888,24810575-24810703,24810797-248110... 49 4e-06
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 46 4e-05
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 43 3e-04
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 37 0.018
07_03_1316 + 25736931-25737206,25737276-25737329,25738036-257381... 35 0.097
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 34 0.13
05_07_0125 + 27861368-27862282 33 0.22
01_06_0188 - 27310814-27311138,27311197-27311547,27311682-273116... 33 0.22
05_04_0114 + 18090593-18092248 32 0.69
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 31 1.2
08_02_1064 - 24033941-24034127,24034432-24034476,24035355-240354... 31 1.2
11_06_0418 - 23317077-23317343,23317614-23317787,23317886-233179... 31 1.6
01_06_1446 - 37409074-37409783,37409896-37409986,37410645-374119... 31 1.6
01_05_0570 + 23347957-23348940,23349038-23349181,23349666-23350046 31 1.6
08_01_0473 - 4169754-4169938,4170039-4170121,4170297-4170347,417... 30 2.1
01_07_0227 + 42144437-42144446,42145059-42145428,42145528-421456... 30 2.1
09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238 30 2.8
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 29 4.8
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 29 6.4
06_01_1003 - 7798800-7799444 29 6.4
06_01_0991 + 7704063-7704707 29 6.4
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 29 6.4
07_03_1114 + 24072771-24072858,24072960-24073176,24075101-24075974 28 8.5
07_03_0478 + 18556773-18556883,18557219-18557318,18557807-185595... 28 8.5
03_05_0066 - 20455976-20456161,20456251-20456347,20456608-204567... 28 8.5
>01_05_0166 + 18844468-18845184,18847394-18847690
Length = 337
Score = 117 bits (281), Expect = 1e-26
Identities = 56/92 (60%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
Frame = -3
Query: 272 PSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVVKVLIFEMPNV--PSDEAVRIFVEF 99
P++V+LLRNMVGPG+VD+ELE EV EC+ KYG V++VLIFE+ P++EAVRIF+ F
Sbjct: 230 PTRVLLLRNMVGPGEVDDELEEEVASECS-KYGTVLRVLIFEITQADFPAEEAVRIFILF 288
Query: 98 KRIESAIKAVVDLNGRFFGGRQVKAGFYDVEK 3
+R E A KA++DL GRFFGGR V+A F+D E+
Sbjct: 289 ERAEEATKAMIDLEGRFFGGRVVRATFFDEER 320
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -2
Query: 861 YDPMWPNDYEKVAKE--LQAKEASVR 790
YDP PNDYE K+ +AKEA VR
Sbjct: 65 YDPARPNDYEDYRKDKLKRAKEAEVR 90
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 53.2 bits (122), Expect = 3e-07
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Frame = -3
Query: 272 PSKVVLLRNMVGPGDV--DEELEPEVKD--ECNTKYGEVVKVLIF--EMPNVP------S 129
P+KVV L +V P ++ DEE E V+D E +YG +VKV+I + P
Sbjct: 464 PTKVVCLTQVVSPDELRDDEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRH 523
Query: 128 DEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYDVEK 3
+ A+++F+EF +ES+ KA ++GR F QV A FY +K
Sbjct: 524 ESALQVFLEFADVESSTKAKNGMHGRKFANNQVVAVFYPEDK 565
>11_06_0728 +
26717018-26717306,26717494-26717598,26717789-26717870,
26717979-26718055,26719087-26719151,26719261-26719302,
26719385-26719444,26719583-26720203,26720315-26720450,
26720667-26720734,26720811-26720948
Length = 560
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Frame = -3
Query: 293 ITEIMKTPSKVVLLRNMVGPGDV--DEELEPEVKD---ECNTKYGEVVKVLIF--EMPNV 135
+ ++ P+KVV L +V ++ DEE E ++D E KYG ++KV+I + +
Sbjct: 450 VYQVGALPTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAG-KYGNLIKVVIPRPDPSGL 508
Query: 134 PSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYDVEK 3
P ++F+E+ ++ A KA ++GR FGG V A FY K
Sbjct: 509 PVAGVGKVFLEYADVDGATKAKTAMHGRKFGGNPVVAVFYPENK 552
>04_04_0376 +
24809804-24809888,24810575-24810703,24810797-24811020,
24811398-24811607,24811697-24811789,24811899-24811937,
24812041-24812130,24812214-24812316,24812388-24812468,
24812929-24813005,24813156-24813236,24814165-24814256,
24814536-24814662
Length = 476
Score = 49.2 bits (112), Expect = 4e-06
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Frame = -3
Query: 275 TPSKVVLLRNMVGPGDV--DE----ELEPEVKDECNTKYGEVVKVLIFEMPNVPSDEAVR 114
T + V+LR+M P ++ DE ELE +V++EC K G V V + E N P E V
Sbjct: 360 TITTTVILRHMFTPAELRADETLLPELEADVREEC-MKLGPVDNVKVCE--NHP--EGV- 413
Query: 113 IFVEFKRIESAIKAVVDLNGRFFGGRQVKA 24
I V+FK + IK + +NGR+FGG Q++A
Sbjct: 414 ILVKFKDRKDGIKCIEKMNGRWFGGNQIQA 443
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 46.0 bits (104), Expect = 4e-05
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Frame = -3
Query: 299 PSITEIMKT--PSKVVLLRNMVGPG-----DVDEELEPEVKDECNTKYGEVVKVLIFEMP 141
P T+ ++T PS+ +LL+NM P D D +++ +V++EC+ K+G+V +
Sbjct: 461 PITTQAIETAPPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECS-KFGQVKHIF----- 514
Query: 140 NVPSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGF 18
V + + +++ F I +A+ A L+GR+F G+ + A F
Sbjct: 515 -VDKNTSGFVYLRFDSITAAMSAQKALHGRWFAGKMITATF 554
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = -3
Query: 275 TPSKVVLLRNMVGPG-----DVDEELEPEVKDECNTKYGEVVKVLIFEMPNVPSDEAVRI 111
+P++ +LL+NM P D D +++ +V+DEC+ K+G V + V + A +
Sbjct: 454 SPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECS-KFGAVNHIF------VDKNTAGFV 506
Query: 110 FVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYDVEK 3
++ F + +A A L+GR+F G+ + A F ++
Sbjct: 507 YLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQ 542
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = -3
Query: 224 DEELEP---EVKDECNT---KYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAVVD 63
DEE+E E ++ +T K+GE+V + N ++V +K ++SA+ A
Sbjct: 220 DEEIEQSYEEFYEDVHTEFLKFGELVNFKVCR--NGSLHLRGNVYVHYKSLDSALIAYSS 277
Query: 62 LNGRFFGGRQVKAGFYDVEK 3
+NGR+F G+Q+ F V +
Sbjct: 278 MNGRYFAGKQITCEFVAVTR 297
>07_03_1316 +
25736931-25737206,25737276-25737329,25738036-25738189,
25740235-25740313,25740413-25740492,25740588-25740654,
25741548-25741619,25742071-25742223,25742309-25742392,
25742811-25742877
Length = 361
Score = 34.7 bits (76), Expect = 0.097
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -3
Query: 254 LRNMVGPGDVDEELEPEVKDECNT---KYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIES 84
L N +G + L+ D+ + KYGEVV + I D FV +K +
Sbjct: 147 LANHLGTCGFESRLQGTTADDLSPLFEKYGEVVDIYI-PRDRRTGDSRGFAFVRYKYEDE 205
Query: 83 AIKAVVDLNGRFFGGRQVKAGF 18
A KAV L+GR GR++ F
Sbjct: 206 AQKAVDRLDGRVVDGREIMVQF 227
>03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = -3
Query: 140 NVPSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGF 18
N + EA I VEF R E+A A L+GR FG R V AG+
Sbjct: 920 NTSALEAGCILVEFLRKEAACIAAHSLHGRRFGSRIVSAGY 960
>05_07_0125 + 27861368-27862282
Length = 304
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -3
Query: 242 VGPGDVDEELEPEVKD--ECNTKYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAV 69
+ P + E E +D E +K+GEV + + + N+ ++V+F+ E A+ A
Sbjct: 69 IDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCD--NLADHMIGNVYVQFREEEQAVAAH 126
Query: 68 VDLNGRFFGGRQV 30
L GRF+ GR +
Sbjct: 127 NALQGRFYSGRPI 139
>01_06_0188 -
27310814-27311138,27311197-27311547,27311682-27311693,
27313598-27313662,27314945-27314968
Length = 258
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -3
Query: 242 VGPGDVDEELEPEVKD--ECNTKYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAV 69
+ P + E E +D E +K+GE+ + + + N+ ++V+F+ + A A
Sbjct: 64 IDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCD--NLADHMIGNVYVQFREEDQAAAAH 121
Query: 68 VDLNGRFFGGRQVKAGFYDV 9
L GRF+ GR + F V
Sbjct: 122 TALQGRFYSGRPIIVDFSPV 141
>05_04_0114 + 18090593-18092248
Length = 551
Score = 31.9 bits (69), Expect = 0.69
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 508 YFAIIFAATELAP*PPMENPADAVAC-GRALIGGGDEDSVVREGGG 642
Y+A +F A E + PP P AC R ++G +D VVREG G
Sbjct: 383 YYAALFDALEASSTPPAAVPPHERACVERWVLGEEIKDIVVREGTG 428
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = -3
Query: 233 GDVDEELEPEVKDECNTKYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAVVDLNG 54
G + + E +E K+G+V + S + +++F ++E AI A LNG
Sbjct: 129 GGISSSISKEELEEEFKKFGKVDGIAF-------SRDQTSAYIDFDKLEDAISAHRALNG 181
Query: 53 RFFGGRQVKAGF 18
R GG+++ F
Sbjct: 182 RVLGGQELCVDF 193
>08_02_1064 -
24033941-24034127,24034432-24034476,24035355-24035421,
24035521-24035600,24035691-24035769,24035864-24035939
Length = 177
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -3
Query: 182 KYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGF 18
+YG+VV V I D FV +K E A KA+ L+GR GR + F
Sbjct: 38 RYGKVVDVFI-PRDRRTGDSRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQF 91
>11_06_0418 -
23317077-23317343,23317614-23317787,23317886-23317971,
23318125-23318244,23318338-23318368,23318457-23318532,
23318672-23318759,23318877-23318938,23319041-23319117,
23319890-23319992,23320237-23320298,23321116-23321289,
23322160-23322405
Length = 521
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 110 FVEFKRIESAIKAVVDLNGRFFGGRQVKAGF 18
FV F+ + A A+ +LNG++ G RQV+ +
Sbjct: 289 FVSFRNQQDAQNAINELNGKWLGNRQVRCNW 319
>01_06_1446 -
37409074-37409783,37409896-37409986,37410645-37411988,
37412062-37412709,37412801-37412852,37413141-37413214,
37414370-37414419,37414488-37414569,37414779-37414828,
37414907-37414949,37415030-37415110,37415198-37415243,
37415336-37415382,37415467-37415532,37415612-37415678,
37415761-37415858
Length = 1182
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 446 VEKTSKRGGRIIHEKDNNVMPPPGFTMQAPA 354
+++ +K R +H DN+++ PPGF M P+
Sbjct: 543 IKERAKSPCRPVHGPDNDIIEPPGFPMAPPS 573
>01_05_0570 + 23347957-23348940,23349038-23349181,23349666-23350046
Length = 502
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 550 PPMENPADAVACGRALIGGGDEDSVVREGGG 642
P M +PA C A GGGD+D EG G
Sbjct: 13 PGMRSPASPGGCLSAAFGGGDDDGEEGEGEG 43
>08_01_0473 -
4169754-4169938,4170039-4170121,4170297-4170347,
4170434-4170507,4170585-4170679,4171672-4171754,
4171848-4172104
Length = 275
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 526 AATELAP*PPMENPADAVACGRALIGGGDEDSVVREGGG 642
AA++ AP PP E A G I DE V +GGG
Sbjct: 7 AASDPAPPPPPETEEQPAAAGGEEIAALDEQLAVADGGG 45
>01_07_0227 +
42144437-42144446,42145059-42145428,42145528-42145649,
42145767-42145935,42146236-42146545,42146742-42146825,
42147012-42147083,42147780-42147821,42147931-42148020,
42148106-42148213,42148292-42148384,42148540-42148619,
42148701-42148953,42151222-42151236
Length = 605
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -3
Query: 125 EAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGF--YDV 9
EA I VEF E++ A L+GR FG R V AG+ YD+
Sbjct: 556 EAGCILVEFLCKEASFMAAHSLHGRPFGSRIVSAGYAPYDL 596
>09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238
Length = 472
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 610 HHPQLVLYRKQPHQLGSPS 554
HHP V+ +QPH +GSPS
Sbjct: 236 HHPHPVMTSRQPHFVGSPS 254
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -3
Query: 233 GDVDEELEPEVKDECNTKYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAVVDLNG 54
G +D + ++ + T YG+VV V +P + FV+F SA +A+V L G
Sbjct: 294 GGLDPSVTDDMLKQVFTPYGDVVHV------KIPVGKRCG-FVQFANRASADEALVLLQG 346
Query: 53 RFFGGRQVK 27
GG+ V+
Sbjct: 347 TLIGGQNVR 355
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 45 EETSIKINYCFNSTFNSFEFNKYSNCFI*RYIR 143
EE +IN FN+T F+F KYSN ++ YIR
Sbjct: 457 EEELPQINPGFNNT--PFKFTKYSNAYMLVYIR 487
>06_01_1003 - 7798800-7799444
Length = 214
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -3
Query: 212 EPEVKDECNTKYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQ 33
E E++D C G V + + + + FVE+ E+A A+ +L+G GR+
Sbjct: 23 EAELRDACEL-IGPVRSLRLAALDPATNKRKGYAFVEYADDETARSALRNLHGHLLRGRE 81
Query: 32 VKAG 21
++ G
Sbjct: 82 LRVG 85
>06_01_0991 + 7704063-7704707
Length = 214
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -3
Query: 212 EPEVKDECNTKYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQ 33
E E++D C G V + + + + FVE+ E+A A+ +L+G GR+
Sbjct: 23 EAELRDACEL-IGPVRSLRLAALDPATNKRKGYAFVEYADDETARSALRNLHGHLLRGRE 81
Query: 32 VKAG 21
++ G
Sbjct: 82 LRVG 85
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -3
Query: 179 YGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQV 30
+G++ + P+ S + F++F ESA KA+ +NG GG +
Sbjct: 440 FGKITHARVVADPDTFSAKGYG-FIKFTDSESATKAIAAMNGALVGGEMI 488
>07_03_1114 + 24072771-24072858,24072960-24073176,24075101-24075974
Length = 392
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 55 PLRSTTALIALSIRLNSTNILTASSDGTFGI 147
PLR+TTAL+A + S LT ++DG G+
Sbjct: 5 PLRATTALLATLLVAASFQDLTVAADGGGGV 35
>07_03_0478 +
18556773-18556883,18557219-18557318,18557807-18559513,
18559709-18560094,18560175-18560246,18560366-18560455
Length = 821
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = -3
Query: 308 RNEPSITEIMKTPSKVVLLRNMVGPGDVDE-----ELEPEVKDECNTKYGEVVKVLIFEM 144
R PSI + PS ++L + +GP + +E E +++++ K G V + IF+
Sbjct: 51 RRSPSIPRASRAPSFILLHPDYLGPMEEEEYNTESSNEEDMQEDDGEKQGNVAEGDIFKP 110
Query: 143 PNVPSDEAVRIFVEFKRIESAIKAVVDLNGR 51
++ ++ + F+ E A + V R
Sbjct: 111 VDIDPAFVPKVGMVFESEEDAFQFYVSYGCR 141
>03_05_0066 -
20455976-20456161,20456251-20456347,20456608-20456738,
20456814-20456869,20457498-20457543
Length = 171
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = -3
Query: 233 GDVDEELEPEVKDECNTKYGEVVKVLIFEMPNVPSDEAVRIFVEFKRIESAIKAVVDLNG 54
G +D + EV + + YGE+V V +P + FV++ SA +A+ LNG
Sbjct: 38 GGLDPSVTDEVLKQAFSPYGELVYV------KIPVGKRCG-FVQYSNRASAEEAIRMLNG 90
Query: 53 RFFGGRQVK 27
GG+ ++
Sbjct: 91 SQLGGQSIR 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,434,361
Number of Sequences: 37544
Number of extensions: 389466
Number of successful extensions: 1246
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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