Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc19c03
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0285 + 6894899-6895114,6896197-6896422,6896889-6896992,689... 78 7e-15
04_04_1516 - 34122205-34122348,34122430-34122534,34122878-341230... 78 9e-15
01_06_1150 + 34910941-34911010,34911611-34911738,34912025-349121... 77 2e-14
06_03_0198 - 17797574-17797717,17797995-17798099,17798509-177986... 77 2e-14
02_01_0154 + 1078561-1078630,1078758-1078885,1079016-1079120,107... 76 4e-14
01_06_0129 - 26770543-26770720,26774592-26774719,26774829-267749... 71 8e-13
01_07_0028 - 40588611-40588718,40588812-40588901,40589966-405901... 69 4e-12
01_06_0222 - 27662122-27662159,27662251-27662341,27662760-276628... 67 2e-11
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409... 64 1e-10
02_02_0339 + 9115297-9115366,9116280-9116407,9117537-9117641,911... 64 2e-10
01_01_1187 + 9444742-9445317 63 3e-10
07_03_1012 + 23295976-23296264,23296475-23296548,23296972-232969... 60 3e-09
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 54 1e-07
05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960 54 1e-07
03_06_0260 - 32717142-32717270,32717743-32717831,32717950-327180... 54 1e-07
02_05_0555 - 29937973-29938395,29938509-29938790 51 1e-06
08_02_0468 - 17505905-17506002,17506295-17506424,17506662-175067... 49 5e-06
10_02_0151 + 5895708-5895736,5896291-5896403,5897956-5898064,589... 46 3e-05
09_02_0429 + 9306862-9306970,9307834-9307942,9308538-9308616,930... 46 3e-05
04_04_0902 - 29262611-29262673,29262796-29262909,29262995-292631... 44 1e-04
06_03_1005 + 26837047-26837093,26837644-26837731,26837854-268379... 43 2e-04
03_01_0159 + 1298002-1298070,1298181-1298264,1300354-1300506,130... 42 7e-04
10_08_0755 - 20329127-20329189,20329276-20329389,20329465-203296... 41 0.001
02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372 39 0.004
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 39 0.005
12_02_1249 - 27331801-27331896,27331984-27332072,27334020-273340... 38 0.007
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733... 38 0.007
10_08_0197 + 15666873-15666916,15667098-15667177,15667490-156676... 33 0.26
02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670 32 0.59
04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148... 31 1.4
01_05_0190 + 19085897-19085968,19086269-19086344,19086945-190869... 29 4.2
03_05_0231 - 22170343-22172004,22172225-22172449 28 9.6
>09_02_0285 +
6894899-6895114,6896197-6896422,6896889-6896992,
6897121-6897239,6897445-6897634
Length = 284
Score = 78.2 bits (184), Expect = 7e-15
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
I+ G I LDI K++WSPAL I VLLSI +LL+ PNPDDPL ++A ++K
Sbjct: 78 INSNGSICLDILKEQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHVYKSQRPRYEET 137
Query: 601 AKEWTRRYAMDN 566
A+ WT++YAM N
Sbjct: 138 ARAWTQKYAMGN 149
>04_04_1516 -
34122205-34122348,34122430-34122534,34122878-34123005,
34124003-34124072
Length = 148
Score = 77.8 bits (183), Expect = 9e-15
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
I+ G I LDI K++WSPAL I VLLSI +LL+ PNPDDPL ++A ++K + ++
Sbjct: 78 INSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEST 137
Query: 601 AKEWTRRYAM 572
A+ WT++YAM
Sbjct: 138 ARSWTQKYAM 147
>01_06_1150 +
34910941-34911010,34911611-34911738,34912025-34912129,
34912525-34912668
Length = 148
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
I+ G I LDI K++WSPAL I VLLSI +LL+ PNPDDPL ++A ++K + +
Sbjct: 78 INSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYETT 137
Query: 601 AKEWTRRYAM 572
A+ WT++YAM
Sbjct: 138 ARSWTQKYAM 147
>06_03_0198 -
17797574-17797717,17797995-17798099,17798509-17798636,
17799444-17799513
Length = 148
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/70 (48%), Positives = 50/70 (71%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
I+ G I LDI K++WSPAL + VLLSI +LL+ PNPDDPL ++A ++K + ++
Sbjct: 78 INSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEST 137
Query: 601 AKEWTRRYAM 572
A+ WT++YAM
Sbjct: 138 ARGWTQKYAM 147
>02_01_0154 +
1078561-1078630,1078758-1078885,1079016-1079120,
1079228-1079371
Length = 148
Score = 75.8 bits (178), Expect = 4e-14
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
I+ G I LDI KD+WSPAL I VLLSI +LL+ PNPDDPL ++A + K +
Sbjct: 78 INSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDRLRYEST 137
Query: 601 AKEWTRRYAM 572
A+ WT++YAM
Sbjct: 138 ARGWTQKYAM 147
>01_06_0129 -
26770543-26770720,26774592-26774719,26774829-26774933,
26775661-26775788,26777332-26777433,26778760-26778861,
26779777-26779852,26779971-26780059,26780177-26780230,
26780482-26780614,26780671-26780797,26781590-26781648
Length = 426
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
I+ G I LDI KD+WSPAL I VLLSI +LL+ PNPDDPL ++A ++K + +
Sbjct: 302 INSNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRHKYENT 361
Query: 601 AKEWTR 584
A+ WT+
Sbjct: 362 ARTWTQ 367
>01_07_0028 -
40588611-40588718,40588812-40588901,40589966-40590125,
40590547-40590595,40591158-40591338
Length = 195
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = -2
Query: 769 GRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEW 590
G I LDI KD+WSPAL ++T LLS+QALLSAP PDDP VA+ + + S A+ W
Sbjct: 86 GAICLDILKDQWSPALTLKTALLSLQALLSAPAPDDPQDAVVAQQYLRDYSTFSATARYW 145
Query: 589 TRRYAMDN 566
T +A ++
Sbjct: 146 TEAFAKNS 153
>01_06_0222 -
27662122-27662159,27662251-27662341,27662760-27662801,
27663591-27663649,27664300-27664386,27664501-27664528,
27664683-27664718
Length = 126
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = -2
Query: 694 QALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRYA 575
+ALLSAPNPDDPL++++A+ WK NE+EA+ AKEWTR YA
Sbjct: 84 KALLSAPNPDDPLSDNIAKHWKANEAEAVETAKEWTRLYA 123
>01_05_0633 +
23840427-23840562,23840699-23840768,23840846-23840951,
23841086-23841184,23841320-23841442,23841555-23842691
Length = 556
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = -2
Query: 781 IDRLGRIXLDIX----KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESE 614
ID GRI LDI K W P+L I TVL SI LLS PNPDD L +++ +K N
Sbjct: 88 IDNGGRICLDILNLPPKGAWQPSLNIATVLTSIGLLLSDPNPDDGLMAEISREYKYNRQV 147
Query: 613 AIRNAKEWTRRYA 575
NA+ WT +YA
Sbjct: 148 FDINARSWTEKYA 160
>02_02_0339 +
9115297-9115366,9116280-9116407,9117537-9117641,
9118165-9118259,9119472-9119538,9119685-9119720
Length = 166
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESE 614
I+ G I LDI K++WSPAL I VLLSI +LL+ PNPDDPL ++A ++K + ++
Sbjct: 78 INSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAK 133
>01_01_1187 + 9444742-9445317
Length = 191
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESE 614
+D G I LDI +DKWS A +RT+LLSIQ+LL PN D PL A LW N+ E
Sbjct: 124 VDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWP-NQDE 178
>07_03_1012 +
23295976-23296264,23296475-23296548,23296972-23296996,
23297486-23297568,23297653-23297685,23298322-23298469,
23298625-23298722
Length = 249
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
+D G + +DI ++ WSPAL I VLL+I+A+++ P+P PL + L+ + ++
Sbjct: 180 VDSTGNLSMDILREGWSPALTISKVLLAIKAIITNPDPYCPLVPSIGHLYLTDRTKHDEI 239
Query: 601 AKEWTRRYA 575
A EWT R+A
Sbjct: 240 AAEWTMRFA 248
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = -2
Query: 769 GRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKE 593
G I LDI +++WSP + +L SIQ+LL PNP+ P ++ A L+ N+ E R +E
Sbjct: 109 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVRE 167
>05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960
Length = 127
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = -2
Query: 769 GRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKE 593
G I LDI +++WSP + +L SIQ+LL PNP+ P ++ A L+ N+ E R +E
Sbjct: 60 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVRE 118
>03_06_0260 -
32717142-32717270,32717743-32717831,32717950-32718039,
32721571-32721596,32721772-32721896
Length = 152
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = -2
Query: 769 GRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKE 593
G I LDI +++WSP + +L SIQ+LL PNP+ P ++ A L+ N+ E R +E
Sbjct: 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVRE 143
>02_05_0555 - 29937973-29938395,29938509-29938790
Length = 234
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAI-R 605
ID GR+ LDI +D WSPAL I +LL ++L P D P +A+ +K +E EA
Sbjct: 100 IDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIAKQYK-HEYEAYEE 158
Query: 604 NAKEWTRRYAMDN*IAGTRAPVPTVRATRPTRYH 503
A+ WT++++ I P + +T P H
Sbjct: 159 KARAWTQKHS-STPIVSHYPPYAVIGSTPPAVPH 191
>08_02_0468 -
17505905-17506002,17506295-17506424,17506662-17506778,
17506881-17506959,17507546-17507654,17507857-17507969,
17510510-17510570,17511562-17511742,17512903-17512960,
17514292-17514497,17514582-17514671,17514752-17514813,
17514911-17514979,17515330-17515334,17516282-17516454
Length = 516
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
ID G + L+I ++ W P L + T++ + L S PN +DPL ++ A + + N + RN
Sbjct: 408 IDLEGNVCLNILREDWKPVLNVNTIVYGLNLLFSQPNDEDPLNHEAAAVLRDNPEKFERN 467
Query: 601 AK 596
+
Sbjct: 468 VQ 469
>10_02_0151 +
5895708-5895736,5896291-5896403,5897956-5898064,
5898580-5898658,5898747-5898863,5900001-5900138
Length = 194
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
ID G + L+I ++ W P L I TV+ + L + PN +DPL ++ A + + N N
Sbjct: 116 IDLEGNVCLNILREDWKPVLNINTVIYGLNLLFTQPNDEDPLNHEAAAVLRDNPKLFEAN 175
Query: 601 AK 596
K
Sbjct: 176 VK 177
>09_02_0429 +
9306862-9306970,9307834-9307942,9308538-9308616,
9308806-9308922,9309185-9309314,9311071-9311111
Length = 194
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
ID G + L+I ++ W P L I T++ + L PN +DPL +D A + + + + RN
Sbjct: 105 IDLDGNVCLNILREDWKPVLNINTIVYGLNLLFIQPNDEDPLNHDAAAVLRDDPQKFRRN 164
Query: 601 AK 596
+
Sbjct: 165 VQ 166
>04_04_0902 -
29262611-29262673,29262796-29262909,29262995-29263141,
29264922-29265005,29265151-29265225
Length = 160
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = -2
Query: 769 GRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEW 590
G + L I W P++ +R +L+ IQ L PNP+ N EL++ + E + ++
Sbjct: 93 GAVCLSILSTAWKPSITVRQILIGIQELFDDPNPNSAAQNISYELYRKDMEEYRKRVRQQ 152
Query: 589 TRRY 578
++Y
Sbjct: 153 AKKY 156
>06_03_1005 +
26837047-26837093,26837644-26837731,26837854-26837998,
26838150-26838227,26838323-26838435,26838538-26838641,
26838804-26839119
Length = 296
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = -2
Query: 769 GRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEW 590
G I ++ K W+P+L +R VLL ++ LL P P+ L +L N E R+A+ +
Sbjct: 135 GEICVNTLKKDWNPSLGLRHVLLVVRCLLIEPFPESALNEQAGKLLLENYEEYARHARLY 194
Query: 589 TRRYAM 572
T +A+
Sbjct: 195 TSIHAL 200
>03_01_0159 +
1298002-1298070,1298181-1298264,1300354-1300506,
1300589-1300702,1300814-1300876
Length = 160
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -2
Query: 769 GRIXLDIXKDK--WSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAK 596
G + L I + W PA+ ++ +L+ IQ LL PNP DP D L+ + +E R +
Sbjct: 91 GTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKRRVR 150
Query: 595 EWTRRY 578
++Y
Sbjct: 151 LQAKQY 156
>10_08_0755 -
20329127-20329189,20329276-20329389,20329465-20329617,
20331790-20332035
Length = 191
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -2
Query: 769 GRIXLDIXKDK--WSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAK 596
G + L I + W PA+ ++ +L+ IQ LL PNP DP D ++ ++ E R +
Sbjct: 122 GTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPEYKRRVR 181
Query: 595 EWTRRY 578
++Y
Sbjct: 182 VQAKQY 187
>02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372
Length = 290
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = -2
Query: 781 IDRLGRIXLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 602
ID G + LD + WS A ++R +L+ ++L P D P+ D+AE + +
Sbjct: 108 IDEEGNMVLDA--ESWSCATKLRGLLIGFVSVLYDPLLDYPINYDIAEQYAYDYERYEAE 165
Query: 601 AKEWTRRYA 575
A+ WTR ++
Sbjct: 166 ARAWTREFS 174
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 38.7 bits (86), Expect = 0.005
Identities = 13/58 (22%), Positives = 32/58 (55%)
Frame = -2
Query: 754 DIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRR 581
++ ++W+P + +++LSI ++LS PN + P + A+ W+ + + + R+
Sbjct: 107 ELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVRRLVRK 164
>12_02_1249 -
27331801-27331896,27331984-27332072,27334020-27334083,
27334208-27334336,27334554-27334607,27334712-27334741
Length = 153
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 769 GRIXLDIXKDKWSPALQIRTVLLSIQALL-SAPNPDDPLAND 647
G I LDI D WSPA+ + +V +SI ++L S+P P ND
Sbjct: 88 GHICLDILYDSWSPAMTVSSVCISILSMLSSSPAKQRPQDND 129
>05_05_0110 +
22470869-22470920,22471044-22471146,22473261-22473358,
22473430-22473530,22474052-22474129,22474578-22474655
Length = 169
Score = 38.3 bits (85), Expect = 0.007
Identities = 13/58 (22%), Positives = 33/58 (56%)
Frame = -2
Query: 754 DIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRR 581
++ ++W+P + +++LSI ++LS+PN + P + A+ W+ + + + R+
Sbjct: 107 ELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKRDDFKKKVRRIVRK 164
>10_08_0197 +
15666873-15666916,15667098-15667177,15667490-15667604,
15667698-15667786,15667850-15667978,15670362-15670492
Length = 195
Score = 33.1 bits (72), Expect = 0.26
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 13/78 (16%)
Frame = -2
Query: 769 GRIXLDIXKDKWSPAL-QIRTVLLSIQA------------LLSAPNPDDPLANDVAELWK 629
G + LD+ WSP +I VL+ I LL PNP DPL + A L
Sbjct: 82 GSVCLDVINQTWSPMFGEITLVLVIISTDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMM 141
Query: 628 VNESEAIRNAKEWTRRYA 575
+ + KE+ +YA
Sbjct: 142 RDRPAYEQKVKEYCEKYA 159
>02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670
Length = 197
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -2
Query: 706 LLSIQALLSAPNPDDPLANDVAELWKVNESEAI-RNAKEWTRR 581
LL ++L P D P+ +D+AE ++ NE E + A+EWTRR
Sbjct: 153 LLGFVSILYDPLLDYPINDDIAEQYE-NEYELYEKEAREWTRR 194
>04_04_1192 + 31611804-31612113,31612235-31614058,31614098-31614842,
31615047-31616835,31617136-31617163,31617343-31617794
Length = 1715
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 481 LHILNRVTCERLLWIKFLLLVDEGRGAGPFAVIHCLTLFASERLGDP 341
L L V C RLLW + ++L + G F I L++ +S LGDP
Sbjct: 1147 LQSLEIVDCPRLLWPQ-MMLEEACEGKTKFPSITHLSIVSSSMLGDP 1192
>01_05_0190 +
19085897-19085968,19086269-19086344,19086945-19086997,
19087270-19087419,19087553-19087652,19087740-19087806,
19088315-19088397,19088497-19088510
Length = 204
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 627 TFHNSATSFASGSSGLGADSRA*IDSSTVRI 719
TF+ F + SSGLG DS A DSS+ R+
Sbjct: 60 TFYPWVMQFRNYSSGLGGDSTATGDSSSTRV 90
>03_05_0231 - 22170343-22172004,22172225-22172449
Length = 628
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 391 AVIHCLTLFASERLGDPTDHCLP 323
A + FA +R G+PTD CLP
Sbjct: 258 AAARSFSYFAFDRDGEPTDECLP 280
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,377,838
Number of Sequences: 37544
Number of extensions: 402505
Number of successful extensions: 990
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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