Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc19a21
(844 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 25 0.66
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 24 1.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 2.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 4.7
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 4.7
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 4.7
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 4.7
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 4.7
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 4.7
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 4.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 4.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 4.7
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 6.2
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 6.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 6.2
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 6.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 8.1
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 25.4 bits (53), Expect = 0.66
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPVMYDHESSYIFVSKDILQLKGTMN-AFY 684
D Y+VD R L + E +NQ V D YI V DI+++ N AFY
Sbjct: 169 DGYTVD-LRHL-AQTEDSNQIEVGIDLTDYYISVEWDIIKVPAVRNEAFY 216
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.2 bits (50), Expect = 1.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 824 YSVDNYRKLYIKMEITNQFPV 762
Y+ +NY+KLY + Q P+
Sbjct: 318 YNNNNYKKLYYNINYIEQIPI 338
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPI 121
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NYRKLY + Q P+
Sbjct: 102 NNYRKLYYNINYIEQIPI 119
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPI 121
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPI 121
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPI 121
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPI 121
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPI 121
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPI 121
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPI 121
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 99 NNYNKHNYNKLYYNINYIEQIPI 121
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 332 NNYNKHNYNKLYYNINYIEQIPI 354
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 830 DRYSVDNYRKLYIKMEITNQFPV 762
+ Y+ NY KLY + Q P+
Sbjct: 332 NNYNKHNYNKLYYNINYIEQIPI 354
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q PV
Sbjct: 104 NNYKKLYYNINYIEQIPV 121
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q PV
Sbjct: 112 NNYKKLYYNINYIEQIPV 129
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q PV
Sbjct: 346 NNYKKLYYNINYIEQIPV 363
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q P+
Sbjct: 102 NNYKKLYYNINYIEQIPI 119
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q P+
Sbjct: 102 NNYKKLYYNINYIEQIPI 119
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q P+
Sbjct: 104 NNYKKLYYNINYIEQIPI 121
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 815 DNYRKLYIKMEITNQFPV 762
+NY+KLY + Q PV
Sbjct: 102 NNYKKLYYNINYIEQVPV 119
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +2
Query: 707 SIAKCLCSQKCTTIHDHT*QETGWLFPFLC 796
+IA C+C +KC H G ++ C
Sbjct: 100 TIAVCVCMRKCPRRHRPVCASNGKIYANHC 129
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,438
Number of Sequences: 438
Number of extensions: 4590
Number of successful extensions: 40
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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