Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc19a10
         (1117 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY834276-1|AAV97884.1| 1042|Homo sapiens mitogen-activated prote...    31   7.6  
AY212247-1|AAO32626.1| 1239|Homo sapiens Ste20 group protein kin...    31   7.6  
AF096300-1|AAD16137.1| 1165|Homo sapiens HPK/GCK-like kinase HGK...    31   7.6  
AC005035-1|AAY14969.1| 1260|Homo sapiens unknown protein.              31   7.6  
AB014587-1|BAA31662.1| 1175|Homo sapiens KIAA0687 protein protein.     31   7.6  
AB013385-1|BAA33714.1|  543|Homo sapiens NIK protein.                  31   7.6  

>AY834276-1|AAV97884.1| 1042|Homo sapiens mitogen-activated protein
           kinase kinase kinase kinase 4 isoform protein.
          Length = 1042

 Score = 31.1 bits (67), Expect = 7.6
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -3

Query: 236 LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
           +R EA+ +D +  G+ V  NP N RP++    I+   +   +  LC A +   +LV T  
Sbjct: 689 MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 748

Query: 62  GLVL 51
           GL+L
Sbjct: 749 GLML 752


>AY212247-1|AAO32626.1| 1239|Homo sapiens Ste20 group protein kinase
            HGK protein.
          Length = 1239

 Score = 31.1 bits (67), Expect = 7.6
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -3

Query: 236  LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
            +R EA+ +D +  G+ V  NP N RP++    I+   +   +  LC A +   +LV T  
Sbjct: 886  MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 945

Query: 62   GLVL 51
            GL+L
Sbjct: 946  GLML 949


>AF096300-1|AAD16137.1| 1165|Homo sapiens HPK/GCK-like kinase HGK
           protein.
          Length = 1165

 Score = 31.1 bits (67), Expect = 7.6
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -3

Query: 236 LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
           +R EA+ +D +  G+ V  NP N RP++    I+   +   +  LC A +   +LV T  
Sbjct: 804 MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 863

Query: 62  GLVL 51
           GL+L
Sbjct: 864 GLML 867


>AC005035-1|AAY14969.1| 1260|Homo sapiens unknown protein.
          Length = 1260

 Score = 31.1 bits (67), Expect = 7.6
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -3

Query: 236  LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
            +R EA+ +D +  G+ V  NP N RP++    I+   +   +  LC A +   +LV T  
Sbjct: 907  MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 966

Query: 62   GLVL 51
            GL+L
Sbjct: 967  GLML 970


>AB014587-1|BAA31662.1| 1175|Homo sapiens KIAA0687 protein protein.
          Length = 1175

 Score = 31.1 bits (67), Expect = 7.6
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -3

Query: 236  LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
            +R EA+ +D +  G+ V  NP N RP++    I+   +   +  LC A +   +LV T  
Sbjct: 822  MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 881

Query: 62   GLVL 51
            GL+L
Sbjct: 882  GLML 885


>AB013385-1|BAA33714.1|  543|Homo sapiens NIK protein.
          Length = 543

 Score = 31.1 bits (67), Expect = 7.6
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -3

Query: 236 LRDEAV-EDASPSGTAVLPNPGNPRPRASAKTIKTIPRCAFASFLCVA-FVCAVLVETCL 63
           +R EA+ +D +  G+ V  NP N RP++    I+   +   +  LC A +   +LV T  
Sbjct: 190 MRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTES 249

Query: 62  GLVL 51
           GL+L
Sbjct: 250 GLML 253


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,716,832
Number of Sequences: 237096
Number of extensions: 2848121
Number of successful extensions: 9414
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9401
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15479331280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)