Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18m16
(447 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 196 2e-49
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 185 3e-46
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 174 8e-43
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 142 3e-33
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 140 2e-32
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 130 1e-29
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 128 7e-29
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 124 9e-28
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 113 2e-24
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 112 4e-24
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 99 5e-20
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 84 2e-15
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 84 2e-15
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 82 5e-15
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 78 8e-14
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 75 5e-13
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 73 3e-12
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 65 8e-10
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 60 2e-08
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 58 1e-07
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 57 2e-07
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 56 5e-07
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 54 1e-06
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 54 1e-06
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 54 2e-06
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 52 6e-06
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 52 8e-06
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 51 1e-05
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 50 2e-05
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 49 5e-05
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 47 2e-04
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 47 2e-04
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 46 3e-04
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 46 5e-04
UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2; Wolbach... 42 0.005
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 42 0.008
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 41 0.011
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 41 0.014
UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5; Bacteri... 39 0.057
UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10; ... 38 0.13
UniRef50_Q5V488 Cluster: Ribosomal protein S10p; n=2; Halobacter... 35 0.70
UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: Fli... 34 1.2
UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycopla... 34 1.6
UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7; Mollicu... 33 2.1
UniRef50_P75581 Cluster: 30S ribosomal protein S10; n=2; Mycopla... 33 2.1
UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2; ... 33 2.8
UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1; Fusoba... 32 4.9
UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispa... 32 6.5
UniRef50_A5ED35 Cluster: Flagellar basal body M-ring protein; n=... 31 8.6
UniRef50_A7QMI1 Cluster: Chromosome chr19 scaffold_126, whole ge... 31 8.6
UniRef50_Q4QJ47 Cluster: Putative uncharacterized protein; n=3; ... 31 8.6
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 196 bits (477), Expect = 2e-49
Identities = 93/108 (86%), Positives = 98/108 (90%), Gaps = 1/108 (0%)
Frame = -2
Query: 323 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 147
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 146 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVE 3
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVE
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVE 113
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 185 bits (451), Expect = 3e-46
Identities = 90/108 (83%), Positives = 96/108 (88%), Gaps = 1/108 (0%)
Frame = -2
Query: 323 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 147
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 146 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVE 3
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVE
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVE 111
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 174 bits (423), Expect = 8e-43
Identities = 81/104 (77%), Positives = 95/104 (91%)
Frame = -2
Query: 314 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 135
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+PTKIL+ITTRK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRK 67
Query: 134 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVE 3
TP GEGSKTW+ ++MRIHKR+IDLHSPSEIVKQITSI+IEPGVE
Sbjct: 68 TPNGEGSKTWETYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVE 111
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 142 bits (344), Expect = 3e-33
Identities = 66/73 (90%), Positives = 70/73 (95%)
Frame = -2
Query: 221 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIV 42
LI KKQKL+VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDL+SPSEIV
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIV 462
Query: 41 KQITSINIEPGVE 3
KQITSI++EPGVE
Sbjct: 463 KQITSISLEPGVE 475
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 140 bits (338), Expect = 2e-32
Identities = 68/112 (60%), Positives = 84/112 (75%)
Frame = -2
Query: 341 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 162
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 161 KILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 6
K+LR+TTRKTPCGEGSKTWDRFQ+RIHKRVIDL S E Q+ I +EPGV
Sbjct: 60 KVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDEATLQLKHIYLEPGV 111
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 130 bits (314), Expect = 1e-29
Identities = 60/107 (56%), Positives = 80/107 (74%)
Frame = -2
Query: 323 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRIT 144
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+PTK LRIT
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRIT 64
Query: 143 TRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVE 3
TRKTPCGEGSKTWD +QMRI+KRV+ + + E VK+ITS+ +EPGVE
Sbjct: 65 TRKTPCGEGSKTWDHYQMRIYKRVLSMKTTPETVKEITSLKVEPGVE 111
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 128 bits (308), Expect = 7e-29
Identities = 61/108 (56%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Frame = -2
Query: 323 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMPTKILRI 147
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMPTK L I
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVI 63
Query: 146 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVE 3
T RK+PCGEGSKTWDRF+MRI+KR+IDL VK IT+ I+PGVE
Sbjct: 64 TVRKSPCGEGSKTWDRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGVE 111
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 124 bits (299), Expect = 9e-28
Identities = 52/104 (50%), Positives = 80/104 (76%)
Frame = -2
Query: 314 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 135
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+ L+ITTRK
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRK 64
Query: 134 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVE 3
TPCG G+ TWD F+++I+KR+IDLH+P+E VK+ITS +E GV+
Sbjct: 65 TPCGNGTNTWDTFELKIYKRIIDLHAPTEQVKKITSFTMESGVD 108
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 113 bits (271), Expect = 2e-24
Identities = 53/114 (46%), Positives = 77/114 (67%)
Frame = -2
Query: 347 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 168
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 167 PTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 6
P + LRITTR+ PCG G++T+D F++RI+KRVID +E VKQ+T I +EP V
Sbjct: 61 PRRRLRITTRRAPCGNGTETYDHFELRIYKRVIDFQGTAEAVKQVTQIALEPDV 114
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 112 bits (269), Expect = 4e-24
Identities = 45/92 (48%), Positives = 67/92 (72%)
Frame = -2
Query: 278 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 99
+RITLTS+++ SLEK C ++I K+ ++GP+R+PTK + + RK+PCGEG+ TWD+
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDK 75
Query: 98 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVE 3
F+M+IHKR+ID HS IT IN++ G+E
Sbjct: 76 FEMKIHKRIIDFHSNKSEFNSITPINLDNGIE 107
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 98.7 bits (235), Expect = 5e-20
Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Frame = -2
Query: 314 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAK----KQKLRV--KGPVRMPTKIL 153
EK + +IR+ +TSR+ + LE +I + Q +V KGPVRMPTK L
Sbjct: 6 EKKVEDEQQTKKIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHL 65
Query: 152 RITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 6
++T RK+PCGEGSKTWDRF+MRIHKRVID K IT+ I PG+
Sbjct: 66 KMTVRKSPCGEGSKTWDRFEMRIHKRVIDFQCTLPTFKDITNFKIGPGI 114
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 83.8 bits (198), Expect = 2e-15
Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = -2
Query: 323 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 147
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK+ ++
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV-QL 62
Query: 146 TTRKTPCGEGSKTWD-RFQMRI 84
+ + C + W+ +FQ RI
Sbjct: 63 ESYISQC--AAVCWESKFQHRI 82
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 83.8 bits (198), Expect = 2e-15
Identities = 33/90 (36%), Positives = 62/90 (68%)
Frame = -2
Query: 275 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 96
R+ LTS N+ L+ VC +++ K+ +R+KGP +P K L I TRK+PCG G++T++++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKW 65
Query: 95 QMRIHKRVIDLHSPSEIVKQITSINIEPGV 6
+MR+H+R+ID+ + + ++++ + I V
Sbjct: 66 EMRMHRRIIDISADDKTIRRLIDLKIPDDV 95
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 82.2 bits (194), Expect = 5e-15
Identities = 34/88 (38%), Positives = 57/88 (64%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
+ RI L+ N R L+++C+ + A K + + GPV +PT+ + + RK P GEGS+TWD
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Query: 101 RFQMRIHKRVIDLHSPSEIVKQITSINI 18
++MR+HKR+ID+ + ++QI I +
Sbjct: 67 HWEMRVHKRLIDISADERALRQIMRIQV 94
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 78.2 bits (184), Expect = 8e-14
Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Frame = -2
Query: 290 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGS 114
P+ RI RI + N S++ + D+ AKK ++V+GP+ +PT+ L +T R+ P G+G
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGY 77
Query: 113 KTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVE 3
T+D ++MRIHKRV+D+ + ++Q+ + I V+
Sbjct: 78 HTYDHWEMRIHKRVVDMDADERALRQLMRLRIPEDVK 114
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 75.4 bits (177), Expect = 5e-13
Identities = 35/95 (36%), Positives = 60/95 (63%)
Frame = -2
Query: 290 PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 111
P + RI + S +V+S+E+V + A++ + V+GPV +P K L I+T + P GEG+K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Query: 110 TWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 6
+D ++MRIHKR+ID+ ++++ I I + V
Sbjct: 63 VFDHWEMRIHKRLIDVELNDKVMRNIMRIRVPSNV 97
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 72.9 bits (171), Expect = 3e-12
Identities = 30/92 (32%), Positives = 55/92 (59%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
+ RI L S N+ SL V + N A+K ++V GP+ +PT + + + P GEG K W+
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWE 63
Query: 101 RFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 6
++M++HKR+ID+ + +++Q+ + + V
Sbjct: 64 HWEMKVHKRIIDIAADERVMRQLMRVRVPDDV 95
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 64.9 bits (151), Expect = 8e-10
Identities = 27/80 (33%), Positives = 49/80 (61%)
Frame = -2
Query: 278 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 99
+RI + S ++ L +V + K+ ++++GP+ +PTKILR+ + G+K WD
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDT 63
Query: 98 FQMRIHKRVIDLHSPSEIVK 39
+QMRIH+R+ID+ + +K
Sbjct: 64 YQMRIHRRIIDIATDDRTIK 83
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 60.5 bits (140), Expect = 2e-08
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = -2
Query: 272 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQ 93
I + ++++ +E+ ++ + + GP R P + L ITTRK+PCGEG+ TW RF+
Sbjct: 27 IIVVGKDLKLVERYVKSIVKEGRA--FGISGPCRAPVRRLTITTRKSPCGEGTNTWHRFE 84
Query: 92 MRIHKRVIDLHSPSEIVKQITSINIE-PGVE 3
+R++KR + + I S + PG++
Sbjct: 85 LRMYKRTFWVTCGGNDISTILSKTVVIPGIQ 115
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 57.6 bits (133), Expect = 1e-07
Identities = 29/95 (30%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = -2
Query: 287 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKT 108
+ RIR+ L + + R L++ A ++ K+ ++GP+ MPTKI R T K+P +
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP-HINKDS 59
Query: 107 WDRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGV 6
++F++RIH R++D+ + + + V +T +++ P V
Sbjct: 60 REQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEV 94
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 56.8 bits (131), Expect = 2e-07
Identities = 27/94 (28%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
+IRI L + + + L++ +++ A++ +V GP+ +PT+I R T ++P + K+ +
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSRE 63
Query: 101 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVE 3
+F++R HKR++D+ P+ + V Q+ +++ GV+
Sbjct: 64 QFEVRTHKRMLDILEPTQQTVDQLMKLDLSAGVD 97
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 55.6 bits (128), Expect = 5e-07
Identities = 26/95 (27%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = -2
Query: 284 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 105
++I+I L S + RSL++ ++++ K+ + GP+ +P KI R T ++P K+
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP-HVHKKSR 61
Query: 104 DRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVE 3
++F++R HKR++ + P+ +V ++ +++ GV+
Sbjct: 62 EQFEIRKHKRLLVIDDPNPAVVDALSKVDLAAGVD 96
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 54.4 bits (125), Expect = 1e-06
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = -2
Query: 305 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 126
QA +IRI L S ++ C ++ AK + RV GPV +PTK ++P
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTKRRIFCVLRSP- 89
Query: 125 GEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVE 3
+ + F+ R H R+ID+H P ++ + + ++ + GV+
Sbjct: 90 HVNKDSREHFETRTHHRLIDVHQPTAQTIDALMALELPSGVD 131
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 54.0 bits (124), Expect = 1e-06
Identities = 26/94 (27%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
+IRI L + R L++ D++ AK+ + GP+ +PT + T ++P K+ +
Sbjct: 14 KIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDRKSRE 72
Query: 101 RFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVE 3
+F++R H+R+ID+ +P S+ + + ++ + GV+
Sbjct: 73 QFEIRTHRRLIDILNPTSKTIDALKTLTLPAGVD 106
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 53.6 bits (123), Expect = 2e-06
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
RIRI L + + R +++ D++ AK+ +V GP+ +PTK R T +P D
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARD 63
Query: 101 RFQMRIHKRVIDLHSPSE-IVKQITSINIEPGVE 3
++++R HKR+ID+ P++ V + +++ GV+
Sbjct: 64 QYEIRTHKRLIDIVDPTDKTVDALMKLDLAAGVD 97
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 52.0 bits (119), Expect = 6e-06
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
+IRI L S + L + +++ AK+ V GP+ +PT++ R T K+P + K+ +
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSPHVD-KKSRE 61
Query: 101 RFQMRIHKRVIDLHS-PSEIVKQITSINIEPGVE 3
+FQ+ +HK +++L S + ++ T+ + GV+
Sbjct: 62 QFQLAVHKCLLELSSFNAHLLSTFTNFQLPAGVD 95
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 51.6 bits (118), Expect = 8e-06
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = -2
Query: 344 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 165
A+ V S I +++P +IRI L S V +E C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 164 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVID-LHSPSEIVKQITSINIEPGVE 3
TK K+P + F++R H+R+ID L+ ++ + + +++ GV+
Sbjct: 133 TKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVD 186
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 51.2 bits (117), Expect = 1e-05
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
RIRI L S + R +++ +++ AK+ +V GP+ MPT+I R +P D
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARD 63
Query: 101 RFQMRIHKRVIDLHSPSE-IVKQITSINIEPGVE 3
++++R +KR+ID+ P++ V + +++ GV+
Sbjct: 64 QYEIRTYKRLIDIVQPTDKTVDALMKLDLAAGVD 97
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = -2
Query: 95 QMRIHKRVIDLHSPSEIVKQITSINIEPGVE 3
+M+IH ++IDL SPSEIVKQITS++IEP VE
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEPEVE 63
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2
Query: 323 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKV 231
KD + IH+IRITL S NV+SLEK+
Sbjct: 4 KDRKNTHGAGGGIHQIRITLISCNVKSLEKM 34
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 48.8 bits (111), Expect = 5e-05
Identities = 26/94 (27%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
+IRI L + R L++ ++ AK+ + GP+ +PT+ T ++P + + +
Sbjct: 5 KIRIRLKAYEHRILDQSADKIVETAKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSRE 63
Query: 101 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVE 3
+F+MR HKR+ID+ +P+ + V + +++ GV+
Sbjct: 64 QFEMRTHKRLIDIVNPTPKTVDSLMKLDLPSGVD 97
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 46.8 bits (106), Expect = 2e-04
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
+IRI L + + R L++ ++ AK+ V GP+ +PT+ I T + + +
Sbjct: 5 KIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTE-KSIYTVLRAVHKYKDSRE 63
Query: 101 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVE 3
+F+MR HKR+ID+ +P+ + V + +++ GV+
Sbjct: 64 QFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVD 97
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
++RI L+S + L C +++ K+ VKGPV +PT+ ++P + +
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLRSP-HVNKDSRE 70
Query: 101 RFQMRIHKRVIDLHS-PSEIVKQITSINIEPGV 6
F++R H R+ID+ S SE ++ + +++ GV
Sbjct: 71 HFEIRSHFRIIDISSCSSETIEMLMRLDLPTGV 103
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 46.4 bits (105), Expect = 3e-04
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
+IRI L + + R L+ C +I A + GP+ +PTK ++P + +
Sbjct: 9 KIRIRLKAFDRRMLDLSCDKIIETADQTAATAIGPIPLPTKRKIYCVLRSPHVDKDSR-E 67
Query: 101 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVE 3
F+ R H+R+ID++SPS + + + +++ GV+
Sbjct: 68 HFETRTHRRIIDIYSPSAKTIDALMKLDLPSGVD 101
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 45.6 bits (103), Expect = 5e-04
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
++ I + S + + KVC + K ++ +P K+ ITT + P G+G+K W
Sbjct: 20 KVCIDMASLEEKQINKVCREFYEYGKTFIDDLQRETVLPKKVESITTLRNPSGQGTKKWS 79
Query: 101 RFQMRIHKRVIDLHSPSEIVKQI 33
R++M +H R L + + ++++
Sbjct: 80 RYKMIVHLRNFYLEATHQQLEKV 102
>UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2;
Wolbachia|Rep: 30S ribosomal protein S10 - Wolbachia
pipientis wMel
Length = 109
Score = 42.3 bits (95), Expect = 0.005
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = -2
Query: 278 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 99
I I + + + LE+ I+ K+ ++ GP+ +P K + ++P + K+ ++
Sbjct: 5 IYINIKAFDCSLLEECVRKFIDELKRSSAKLSGPIALPRKDSKFIVNRSPHVD-KKSREQ 63
Query: 98 FQMRIHKRVIDLHSPSEIVKQ-ITSINIEPGVE 3
F+MR +R+I LH + + Q +T ++ GVE
Sbjct: 64 FEMRTSRRLIVLHDLTPTMMQMLTGLSFSAGVE 96
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 41.5 bits (93), Expect = 0.008
Identities = 27/95 (28%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = -2
Query: 284 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 105
+ ++I L S + R L++ +I ++ +VKGP+ +PTK T ++P +
Sbjct: 3 NEMKIKLFSYDHRLLDQSVRKIIKSSQDSGAKVKGPIPLPTKKEIFTICRSP-HVNKTSR 61
Query: 104 DRFQMRIHKRVIDLHSPSEIVKQ-ITSINIEPGVE 3
++F+ R H+R+I L + +E K+ + +I I GV+
Sbjct: 62 EQFERRTHQRLIILLNTTEKTKEYLKNIIIPSGVD 96
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 41.1 bits (92), Expect = 0.011
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = -2
Query: 287 IHRIRITLTSRNVRSLEKVCADLI-NGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 111
I + + L S ++ L+ CA ++ N Q L++ GP+ +PTKI +IT ++P + K
Sbjct: 3 ITKCSLHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSPHID-KK 61
Query: 110 TWDRFQMRIHKRVIDLHS 57
+ ++F++R + + I + S
Sbjct: 62 SREQFEIRTYTKTIQIES 79
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 40.7 bits (91), Expect = 0.014
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
+IRI L S + ++K ++ K V GP+ +PT RI T K+ +
Sbjct: 4 KIRIKLKSYDHNLVDKSAEKIVRTVKATGAIVSGPIPLPTH-KRIFTVNRSTFVNKKSRE 62
Query: 101 RFQMRIHKRVIDLH-SPSEIVKQITSINIEPGVE 3
+F++ +KR+ID++ S ++ V + + + GVE
Sbjct: 63 QFELSSYKRLIDIYSSTAKTVDALMKLELPSGVE 96
>UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5;
Bacteria|Rep: 30S ribosomal protein S10 - Onion yellows
phytoplasma
Length = 107
Score = 38.7 bits (86), Expect = 0.057
Identities = 20/93 (21%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = -2
Query: 278 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 99
I+I L + + +++ +I+ K ++GP+ +PT+ T ++P + ++
Sbjct: 9 IKIILRAYDHHLIDQSAKKIIDILTKTGANIEGPIPLPTRKEVFTVLRSPF-VNKDSREQ 67
Query: 98 FQMRIHKRVIDLHSPS-EIVKQITSINIEPGVE 3
F+ R HKR+I + +P+ + ++ + I++ P ++
Sbjct: 68 FERRTHKRLIQIINPNKKTIESLMHISLPPAID 100
>UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10;
n=3; Bacillariophyta|Rep: Chloroplast 30S ribosomal
protein S10 - Phaeodactylum tricornutum
Length = 107
Score = 37.5 bits (83), Expect = 0.13
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = -2
Query: 281 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 102
+IR+ L S N L C ++N + G + +PT+ ++P + +
Sbjct: 8 KIRVRLESFNHELLNSSCQKIVNILQNTLSNSIGVITLPTRKRIYCVLRSPHVDKDSR-E 66
Query: 101 RFQMRIHKRVIDLHSPSE--IVKQITSINIEPGV 6
F++R HKR+++++ SE I ++ ++ PGV
Sbjct: 67 HFEIRTHKRILEIYYNSEVPIFDLLSEADLPPGV 100
>UniRef50_Q5V488 Cluster: Ribosomal protein S10p; n=2;
Halobacteriaceae|Rep: Ribosomal protein S10p -
Haloarcula marismortui (Halobacterium marismortui)
Length = 138
Score = 35.1 bits (77), Expect = 0.70
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = -2
Query: 272 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQ 93
+T TS + LE ++ A+++ + +KGP + LRI K+ +G + +D +
Sbjct: 35 LTFTSGDRHRLEDTVTEIKQSAEQKGVELKGPHPKQPQELRIPQSKSLGPDGGR-FDSWT 93
Query: 92 MRIHKRVIDLHSPSEIVKQIT------SINIEPGVE 3
++ R I++ E + +T +I++E GVE
Sbjct: 94 HTVYTRTIEIVGYEEFARDVTQRTFPNAIHVEAGVE 129
>UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: FliF
protein - Bradyrhizobium japonicum
Length = 519
Score = 34.3 bits (75), Expect = 1.2
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = -2
Query: 314 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 135
E P+ S + R+R L ++ +R++ + A +NG K Q++ + T +
Sbjct: 142 EAPEPSASIVVRVRGALEAQQIRAIRHLVASAVNGLKPQRVSIVDEAGQLLADGAATDPE 201
Query: 134 TPCGEGSKTWDRFQMRIHKRVIDLHS 57
G+ +T F+ R+ K+V D+ S
Sbjct: 202 QALGDERRT--TFEKRMRKQVEDIVS 225
>UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S10 -
Mycoplasma hyopneumoniae (strain 232)
Length = 106
Score = 33.9 bits (74), Expect = 1.6
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = -2
Query: 278 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 99
I+I L S + R ++ +I A++ + +GPV +PT I T K+ ++
Sbjct: 6 IKIKLKSFDHRQIDAAAKKIILLARELNIETRGPVPLPTS-RAIYTILRSVHINKKSREQ 64
Query: 98 FQMRIHKRVIDL 63
F+ R HKR++ L
Sbjct: 65 FESRTHKRLVIL 76
>UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7;
Mollicutes|Rep: 30S ribosomal protein S10 - Mycoplasma
pulmonis
Length = 103
Score = 33.5 bits (73), Expect = 2.1
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -2
Query: 209 AKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQI 33
A K+K+ GP+ +PTK I T K+ ++F+ R +KR I ++P + V+ +
Sbjct: 29 ASKEKIDYSGPIPLPTK-REIFTILRSVHVNKKSREQFERRTYKRFIVFNNPGPKFVEIL 87
Query: 32 TSINIEPGVE 3
+ GVE
Sbjct: 88 KRTEMPAGVE 97
>UniRef50_P75581 Cluster: 30S ribosomal protein S10; n=2;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
pneumoniae
Length = 108
Score = 33.5 bits (73), Expect = 2.1
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -2
Query: 278 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 99
++I L S + L+ ++ K +++KGP+ +PTK IT ++P + + ++
Sbjct: 12 LKIKLESYDSTLLDLTTKKIVEVVKGVDVKIKGPLPLPTKKEVITIIRSPHVDKASR-EQ 70
Query: 98 FQMRIHKRVIDLHSPSE-IVKQITSINIEPGV 6
F+ HKR++ L ++ + + I I GV
Sbjct: 71 FEKNRHKRLMILVDVNQGAIDSLKRIKIPVGV 102
>UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2;
Burkholderia ambifaria|Rep: Putative uncharacterized
protein - Burkholderia ambifaria MC40-6
Length = 325
Score = 33.1 bits (72), Expect = 2.8
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = -3
Query: 382 KLFISAGIQQATWQPL*CQAKTSRNPRQRSPLFTASGSLLLLAMCAHSRRSV 227
+ FI+AGI TWQPL T+R P + F+ G+L LLA A R S+
Sbjct: 231 RTFIAAGIHPETWQPL----ATARRPAMIA--FSIIGALGLLAFWAWGRMSL 276
>UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
SSU ribosomal protein S10P - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 78
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = -2
Query: 170 MPTKILRITT-RKTPCGEGSKTWDRFQMRIHKRVIDL-HSPSEIVKQITSINI 18
+PT+I + T R + S+ ++F+MR+H+R+I+L +S + + +TS+++
Sbjct: 3 LPTRIRKYTVLRSLHVNKDSR--EQFEMRVHRRMIELVNSTDKAISSLTSVHL 53
>UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-128 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 226
Score = 31.9 bits (69), Expect = 6.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 173 RMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRV 72
R+P ++ + +TPC S W+R ++R+H RV
Sbjct: 8 RLPLRVY-VDEAETPCWRASADWERGELRLHYRV 40
>UniRef50_A5ED35 Cluster: Flagellar basal body M-ring protein; n=4;
Alphaproteobacteria|Rep: Flagellar basal body M-ring
protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182)
Length = 535
Score = 31.5 bits (68), Expect = 8.6
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -2
Query: 314 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 135
E P+ S + R+R L + +R++ + A +NG K Q++ + V ++L T+
Sbjct: 160 ETPEPSASIVVRVRGALDAAQIRAIRHLVASAVNGLKPQRVSI---VDEAGQLLADGTQT 216
Query: 134 TPCGE-GSKTWDRFQMRIHKRVIDLHS 57
+ G + + F+ R+ K+V D+ S
Sbjct: 217 DIDQQVGDERRNTFEKRMRKQVEDIVS 243
>UniRef50_A7QMI1 Cluster: Chromosome chr19 scaffold_126, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr19 scaffold_126, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 215
Score = 31.5 bits (68), Expect = 8.6
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +1
Query: 175 TGPFTRSFCFLAPLIRSAQTFSSERTLREVRVILMR*IGETSAWGFSMSLPDTTAAAM 348
TG RSF LA RSAQ+F +E T RE+ L+ S+ GF++ + T A M
Sbjct: 107 TGGTPRSFTTLA---RSAQSFGNETTRREIHASLLM---ACSSAGFTLLVTGLTLARM 158
>UniRef50_Q4QJ47 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1024
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 354 KQHGSRCSVRQRHRETPGRGLPYSPHQDHSYFSQCALTREGLC 226
++HG R ++R T RG YS H D S + + +T G C
Sbjct: 906 RRHGGRGQAQRRSNPTSDRGTAYSSHLDSSVWEESRVT-YGTC 947
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,201,830
Number of Sequences: 1657284
Number of extensions: 9447397
Number of successful extensions: 22409
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 21960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22391
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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