Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18m12
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457383-1|CAG33664.1| 387|Homo sapiens PAI-RBP1 protein. 65 2e-10
BC017449-1|AAH17449.1| 387|Homo sapiens SERPINE1 mRNA binding p... 65 2e-10
AL590559-4|CAH73325.1| 387|Homo sapiens PAI-1 mRNA-binding prot... 65 2e-10
AK223138-1|BAD96858.1| 387|Homo sapiens PAI-1 mRNA-binding prot... 65 2e-10
AK222955-1|BAD96675.1| 387|Homo sapiens PAI-1 mRNA-binding prot... 65 2e-10
AY032853-1|AAK51130.1| 309|Homo sapiens CGI-55 protein. 64 3e-10
AL590559-1|CAH73326.1| 393|Homo sapiens PAI-1 mRNA-binding prot... 64 3e-10
AF151813-1|AAD34050.1| 393|Homo sapiens CGI-55 protein protein. 64 3e-10
BC020555-1|AAH20555.1| 402|Homo sapiens SERPINE1 mRNA binding p... 56 9e-08
BC002488-1|AAH02488.1| 402|Homo sapiens SERPINE1 mRNA binding p... 56 9e-08
AL590559-2|CAH73324.1| 402|Homo sapiens PAI-1 mRNA-binding prot... 56 9e-08
BC026916-1|AAH26916.1| 408|Homo sapiens SERPINE1 mRNA binding p... 56 2e-07
BC019273-1|AAH19273.1| 408|Homo sapiens SERPINE1 mRNA binding p... 56 2e-07
BC008045-1|AAH08045.1| 408|Homo sapiens SERPINE1 mRNA binding p... 56 2e-07
BC003049-1|AAH03049.1| 408|Homo sapiens SERPINE1 mRNA binding p... 56 2e-07
AL590559-3|CAH73323.1| 408|Homo sapiens PAI-1 mRNA-binding prot... 56 2e-07
AK074970-1|BAC11324.1| 408|Homo sapiens protein ( Homo sapiens ... 56 2e-07
AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated prot... 31 5.0
>CR457383-1|CAG33664.1| 387|Homo sapiens PAI-RBP1 protein.
Length = 387
Score = 65.3 bits (152), Expect = 2e-10
Identities = 35/101 (34%), Positives = 53/101 (52%)
Frame = -1
Query: 672 KTGVKSVDKREGAGPHXWGTIKDDLDELNKXXXXXXXXXEKAPEAGAGDGQXXXXXXXXX 493
++G+K DKR G+G H WGT+KD+L +L++ + A D +
Sbjct: 201 RSGLKHEDKRGGSGSHNWGTVKDELTDLDQSNVTEETPEGEEHHPVA-DTENKENEVEEV 259
Query: 492 XXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 260 KEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 299
>BC017449-1|AAH17449.1| 387|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 387
Score = 65.3 bits (152), Expect = 2e-10
Identities = 35/101 (34%), Positives = 53/101 (52%)
Frame = -1
Query: 672 KTGVKSVDKREGAGPHXWGTIKDDLDELNKXXXXXXXXXEKAPEAGAGDGQXXXXXXXXX 493
++G+K DKR G+G H WGT+KD+L +L++ + A D +
Sbjct: 201 RSGLKHEDKRGGSGSHNWGTVKDELTDLDQSNVTEETPEGEEHHPVA-DTENKENEVEEV 259
Query: 492 XXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 260 KEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 299
>AL590559-4|CAH73325.1| 387|Homo sapiens PAI-1 mRNA-binding protein
(PAI-RBP1) protein.
Length = 387
Score = 65.3 bits (152), Expect = 2e-10
Identities = 35/101 (34%), Positives = 53/101 (52%)
Frame = -1
Query: 672 KTGVKSVDKREGAGPHXWGTIKDDLDELNKXXXXXXXXXEKAPEAGAGDGQXXXXXXXXX 493
++G+K DKR G+G H WGT+KD+L +L++ + A D +
Sbjct: 201 RSGLKHEDKRGGSGSHNWGTVKDELTDLDQSNVTEETPEGEEHHPVA-DTENKENEVEEV 259
Query: 492 XXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 260 KEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 299
>AK223138-1|BAD96858.1| 387|Homo sapiens PAI-1 mRNA-binding protein
variant protein.
Length = 387
Score = 65.3 bits (152), Expect = 2e-10
Identities = 35/101 (34%), Positives = 53/101 (52%)
Frame = -1
Query: 672 KTGVKSVDKREGAGPHXWGTIKDDLDELNKXXXXXXXXXEKAPEAGAGDGQXXXXXXXXX 493
++G+K DKR G+G H WGT+KD+L +L++ + A D +
Sbjct: 201 RSGLKHEDKRGGSGSHNWGTVKDELTDLDQSNVTEETPEGEEHHPVA-DTENKENEVEEV 259
Query: 492 XXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 260 KEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 299
>AK222955-1|BAD96675.1| 387|Homo sapiens PAI-1 mRNA-binding protein
variant protein.
Length = 387
Score = 65.3 bits (152), Expect = 2e-10
Identities = 35/101 (34%), Positives = 53/101 (52%)
Frame = -1
Query: 672 KTGVKSVDKREGAGPHXWGTIKDDLDELNKXXXXXXXXXEKAPEAGAGDGQXXXXXXXXX 493
++G+K DKR G+G H WGT+KD+L +L++ + A D +
Sbjct: 201 RSGLKHEDKRGGSGSHNWGTVKDELTDLDQSNVTEETPEGEEHHPVA-DTENKENEVEEV 259
Query: 492 XXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 260 KEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 299
>AY032853-1|AAK51130.1| 309|Homo sapiens CGI-55 protein.
Length = 309
Score = 64.5 bits (150), Expect = 3e-10
Identities = 35/100 (35%), Positives = 52/100 (52%)
Frame = -1
Query: 669 TGVKSVDKREGAGPHXWGTIKDDLDELNKXXXXXXXXXEKAPEAGAGDGQXXXXXXXXXX 490
+G+K DKR G+G H WGT+KD+L +L++ + A D +
Sbjct: 124 SGLKHEDKRGGSGSHNWGTVKDELTDLDQSNVTEETPEGEEHHPVA-DTENKENEVEEVK 182
Query: 489 XXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 183 EEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 221
>AL590559-1|CAH73326.1| 393|Homo sapiens PAI-1 mRNA-binding protein
(PAI-RBP1) protein.
Length = 393
Score = 64.5 bits (150), Expect = 3e-10
Identities = 35/100 (35%), Positives = 52/100 (52%)
Frame = -1
Query: 669 TGVKSVDKREGAGPHXWGTIKDDLDELNKXXXXXXXXXEKAPEAGAGDGQXXXXXXXXXX 490
+G+K DKR G+G H WGT+KD+L +L++ + A D +
Sbjct: 208 SGLKHEDKRGGSGSHNWGTVKDELTDLDQSNVTEETPEGEEHHPVA-DTENKENEVEEVK 266
Query: 489 XXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 267 EEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 305
>AF151813-1|AAD34050.1| 393|Homo sapiens CGI-55 protein protein.
Length = 393
Score = 64.5 bits (150), Expect = 3e-10
Identities = 35/100 (35%), Positives = 52/100 (52%)
Frame = -1
Query: 669 TGVKSVDKREGAGPHXWGTIKDDLDELNKXXXXXXXXXEKAPEAGAGDGQXXXXXXXXXX 490
+G+K DKR G+G H WGT+KD+L +L++ + A D +
Sbjct: 208 SGLKHEDKRGGSGSHNWGTVKDELTDLDQSNVTEETPEGEEHHPVA-DTENKENEVEEVK 266
Query: 489 XXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 267 EEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 305
>BC020555-1|AAH20555.1| 402|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 402
Score = 56.4 bits (130), Expect = 9e-08
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Frame = -1
Query: 672 KTGVKSVDKREGAGPHXWGTIKDDLDE----------LNKXXXXXXXXXEKAPEA----G 535
++G+K DKR G+G H WGT+KD+L E N E+ PE
Sbjct: 201 RSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHP 260
Query: 534 AGDGQXXXXXXXXXXXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
D + E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 261 VADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 314
>BC002488-1|AAH02488.1| 402|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 402
Score = 56.4 bits (130), Expect = 9e-08
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Frame = -1
Query: 672 KTGVKSVDKREGAGPHXWGTIKDDLDE----------LNKXXXXXXXXXEKAPEA----G 535
++G+K DKR G+G H WGT+KD+L E N E+ PE
Sbjct: 201 RSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHP 260
Query: 534 AGDGQXXXXXXXXXXXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
D + E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 261 VADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 314
>AL590559-2|CAH73324.1| 402|Homo sapiens PAI-1 mRNA-binding protein
(PAI-RBP1) protein.
Length = 402
Score = 56.4 bits (130), Expect = 9e-08
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Frame = -1
Query: 672 KTGVKSVDKREGAGPHXWGTIKDDLDE----------LNKXXXXXXXXXEKAPEA----G 535
++G+K DKR G+G H WGT+KD+L E N E+ PE
Sbjct: 201 RSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHP 260
Query: 534 AGDGQXXXXXXXXXXXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
D + E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 261 VADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 314
>BC026916-1|AAH26916.1| 408|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 408
Score = 55.6 bits (128), Expect = 2e-07
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Frame = -1
Query: 669 TGVKSVDKREGAGPHXWGTIKDDLDE----------LNKXXXXXXXXXEKAPEAG----A 532
+G+K DKR G+G H WGT+KD+L E N E+ PE
Sbjct: 208 SGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPV 267
Query: 531 GDGQXXXXXXXXXXXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
D + E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 268 ADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 320
>BC019273-1|AAH19273.1| 408|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 408
Score = 55.6 bits (128), Expect = 2e-07
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Frame = -1
Query: 669 TGVKSVDKREGAGPHXWGTIKDDLDE----------LNKXXXXXXXXXEKAPEAG----A 532
+G+K DKR G+G H WGT+KD+L E N E+ PE
Sbjct: 208 SGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPV 267
Query: 531 GDGQXXXXXXXXXXXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
D + E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 268 ADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 320
>BC008045-1|AAH08045.1| 408|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 408
Score = 55.6 bits (128), Expect = 2e-07
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Frame = -1
Query: 669 TGVKSVDKREGAGPHXWGTIKDDLDE----------LNKXXXXXXXXXEKAPEAG----A 532
+G+K DKR G+G H WGT+KD+L E N E+ PE
Sbjct: 208 SGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPV 267
Query: 531 GDGQXXXXXXXXXXXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
D + E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 268 ADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 320
>BC003049-1|AAH03049.1| 408|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 408
Score = 55.6 bits (128), Expect = 2e-07
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Frame = -1
Query: 669 TGVKSVDKREGAGPHXWGTIKDDLDE----------LNKXXXXXXXXXEKAPEAG----A 532
+G+K DKR G+G H WGT+KD+L E N E+ PE
Sbjct: 208 SGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPV 267
Query: 531 GDGQXXXXXXXXXXXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
D + E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 268 ADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 320
>AL590559-3|CAH73323.1| 408|Homo sapiens PAI-1 mRNA-binding protein
(PAI-RBP1) protein.
Length = 408
Score = 55.6 bits (128), Expect = 2e-07
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Frame = -1
Query: 669 TGVKSVDKREGAGPHXWGTIKDDLDE----------LNKXXXXXXXXXEKAPEAG----A 532
+G+K DKR G+G H WGT+KD+L E N E+ PE
Sbjct: 208 SGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPV 267
Query: 531 GDGQXXXXXXXXXXXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
D + E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 268 ADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD-GQWK 320
>AK074970-1|BAC11324.1| 408|Homo sapiens protein ( Homo sapiens
cDNA FLJ90489 fis, clone NT2RP3003473, moderately
similar to PAI-1 mRNA-binding protein. ).
Length = 408
Score = 55.6 bits (128), Expect = 2e-07
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Frame = -1
Query: 669 TGVKSVDKREGAGPHXWGTIKDDLDE----------LNKXXXXXXXXXEKAPEAG----A 532
+G+K DKR G+G H WGT+KD+L E N E+ PE
Sbjct: 208 SGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPV 267
Query: 531 GDGQXXXXXXXXXXXXXXXELTLDEYKALRNAQRTAPQYNLRKAGEGEDLSQWK 370
D + E+TLDE+KA++N R ++N+RK EG D QWK
Sbjct: 268 ADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPSEGAD-GQWK 320
>AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated protein
4.5 protein.
Length = 186
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +3
Query: 348 CVPT--EPGFSTGSSLHPHLPSSNCTAERCVARCVKPCIHRVSTH 476
C PT P + S HP S+C C CV+P RVS H
Sbjct: 121 CQPTCCRPSYCISSCCHPSCCESSCCRPCC---CVRPVCGRVSCH 162
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,975,173
Number of Sequences: 237096
Number of extensions: 1279624
Number of successful extensions: 8604
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8522
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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