Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc18m04
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical pr...    31   0.75 
AL021501-2|CAA16415.2|  356|Caenorhabditis elegans Hypothetical ...    31   0.75 

>Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical
           protein K03D7.6 protein.
          Length = 352

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = -1

Query: 343 KSILTYLLVCYFFCTSMDIFICLVS--FFFL 257
           K++ T LL+ + FC  +D+F+C V   +FFL
Sbjct: 60  KNVKTSLLINHLFCALLDLFLCTVCTVYFFL 90


>AL021501-2|CAA16415.2|  356|Caenorhabditis elegans Hypothetical
           protein Y61B8A.2 protein.
          Length = 356

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = -1

Query: 343 KSILTYLLVCYFFCTSMDIFICLVS--FFFL 257
           K++ T LLV +FFC  +D+ +C +S  +FFL
Sbjct: 60  KNVRTPLLVNHFFCAFLDLTLCTLSTVYFFL 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,929,732
Number of Sequences: 27780
Number of extensions: 337342
Number of successful extensions: 825
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)