Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18l01
(855 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 28 0.095
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 8.3
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 8.3
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 8.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 8.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 8.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 8.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 8.3
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 8.3
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 8.3
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 8.3
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 8.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 8.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 8.3
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 8.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 8.3
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 8.3
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 8.3
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 8.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 8.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 8.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 8.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 8.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 8.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 8.3
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 8.3
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 8.3
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 8.3
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 8.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 8.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 8.3
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 8.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 8.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 8.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 8.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 8.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 8.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 8.3
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 28.3 bits (60), Expect = 0.095
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 472 DRRCLIISLLFEPAAGVAAQVEAPDLVV 555
DR CLII LF A +A + AP ++V
Sbjct: 527 DRMCLIIFTLFTIIATIAVLLSAPHIIV 554
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 3.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 594 WLPAIPFMLSIFIYDEIRRFYLRRNPGGW 508
WLP + L IY IRR L GGW
Sbjct: 546 WLPLLRNRLDTLIYPIIRR-KLGSALGGW 573
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 159 IGPSTPFP 166
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 159 IGPSTPFP 166
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 144 IGPSTPFP 151
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 144 IGPSTPFP 151
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 144 IGPSTPFP 151
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 144 IGPSTPFP 151
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 144 IGPSTPFP 151
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 155 IGPSTPFP 162
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 155 IGPSTPFP 162
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 155 IGPSTPFP 162
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 155 IGPSTPFP 162
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 147 IGPSTPFP 154
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 147 IGPSTPFP 154
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 147 IGPSTPFP 154
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 147 IGPSTPFP 154
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 152 IGPSTPFP 159
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 150 IGPSTPFP 157
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 150 IGPSTPFP 157
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 150 IGPSTPFP 157
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 150 IGPSTPFP 157
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 156 IGPSTPFP 163
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 367 IGPSTPFP 374
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 378 IGPSTPFP 385
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 384 IGPSTPFP 391
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 384 IGPSTPFP 391
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 395 IGPSTPFP 402
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 65 LGPSTPFP 88
+GPSTPFP
Sbjct: 380 IGPSTPFP 387
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 724 HSPGHAQLG 698
H PGHAQ+G
Sbjct: 213 HLPGHAQMG 221
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,795
Number of Sequences: 438
Number of extensions: 5598
Number of successful extensions: 54
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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