Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18k22
(863 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton... 66 2e-10
CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein. 66 2e-10
CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein. 66 2e-10
BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting... 66 2e-10
BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting... 66 2e-10
BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting... 66 2e-10
BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting... 66 2e-10
BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting... 66 2e-10
D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protei... 37 0.082
CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein. 37 0.082
BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting... 37 0.082
BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting... 37 0.082
BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting... 37 0.082
AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transportin... 37 0.082
>M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton
channel subunit protein.
Length = 155
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 861 VRGTAQQPRLFVGMILIXIFAEVLGLYGLIVAIYL 757
VRGTAQQPRLFVGMILI IFAEVLGLYGLIVA+ L
Sbjct: 118 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 861 VRGTAQQPRLFVGMILIXIFAEVLGLYGLIVAIYL 757
VRGTAQQPRLFVGMILI IFAEVLGLYGLIVA+ L
Sbjct: 118 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 861 VRGTAQQPRLFVGMILIXIFAEVLGLYGLIVAIYL 757
VRGTAQQPRLFVGMILI IFAEVLGLYGLIVA+ L
Sbjct: 118 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 861 VRGTAQQPRLFVGMILIXIFAEVLGLYGLIVAIYL 757
VRGTAQQPRLFVGMILI IFAEVLGLYGLIVA+ L
Sbjct: 118 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 861 VRGTAQQPRLFVGMILIXIFAEVLGLYGLIVAIYL 757
VRGTAQQPRLFVGMILI IFAEVLGLYGLIVA+ L
Sbjct: 118 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 861 VRGTAQQPRLFVGMILIXIFAEVLGLYGLIVAIYL 757
VRGTAQQPRLFVGMILI IFAEVLGLYGLIVA+ L
Sbjct: 118 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 861 VRGTAQQPRLFVGMILIXIFAEVLGLYGLIVAIYL 757
VRGTAQQPRLFVGMILI IFAEVLGLYGLIVA+ L
Sbjct: 118 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 861 VRGTAQQPRLFVGMILIXIFAEVLGLYGLIVAIYL 757
VRGTAQQPRLFVGMILI IFAEVLGLYGLIVA+ L
Sbjct: 118 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protein
protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.082
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -3
Query: 849 AQQPRLFVGMILIXIFAEVLGLYGLIVAI 763
AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 167 AQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
>CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.082
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -3
Query: 849 AQQPRLFVGMILIXIFAEVLGLYGLIVAI 763
AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 167 AQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
>BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit c'' protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.082
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -3
Query: 849 AQQPRLFVGMILIXIFAEVLGLYGLIVAI 763
AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 167 AQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
>BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.082
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -3
Query: 849 AQQPRLFVGMILIXIFAEVLGLYGLIVAI 763
AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 167 AQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
>BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.082
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -3
Query: 849 AQQPRLFVGMILIXIFAEVLGLYGLIVAI 763
AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 167 AQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
>AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.082
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -3
Query: 849 AQQPRLFVGMILIXIFAEVLGLYGLIVAI 763
AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 167 AQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,465,203
Number of Sequences: 237096
Number of extensions: 2660843
Number of successful extensions: 5287
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5287
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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