Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc18k12
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 332 1e-91
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 332 1e-91
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 332 1e-91
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 332 1e-91
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 332 1e-91
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 332 1e-91
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 332 2e-91
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 332 2e-91
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 332 2e-91
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 326 1e-89
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 312 1e-85
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 157 1e-38
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 148 5e-36
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 8e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 102 2e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 4e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 75 4e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.63
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.63
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.63
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 29 2.6
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 29 3.4
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.5
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 7.8
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 7.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 7.8
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 7.8
AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 332 bits (817), Expect = 1e-91
Identities = 156/162 (96%), Positives = 160/162 (98%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 334
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 332 bits (817), Expect = 1e-91
Identities = 156/162 (96%), Positives = 160/162 (98%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 334
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 332 bits (817), Expect = 1e-91
Identities = 156/162 (96%), Positives = 160/162 (98%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 334
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 332 bits (817), Expect = 1e-91
Identities = 156/162 (96%), Positives = 160/162 (98%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 171 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 230
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP
Sbjct: 231 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 290
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 291 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 332 bits (817), Expect = 1e-91
Identities = 156/162 (96%), Positives = 160/162 (98%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 201 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 260
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP
Sbjct: 261 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 320
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 321 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 332 bits (817), Expect = 1e-91
Identities = 156/162 (96%), Positives = 160/162 (98%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 334
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 332 bits (815), Expect = 2e-91
Identities = 155/162 (95%), Positives = 160/162 (98%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 334
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 332 bits (815), Expect = 2e-91
Identities = 155/162 (95%), Positives = 160/162 (98%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 334
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 332 bits (815), Expect = 2e-91
Identities = 155/162 (95%), Positives = 160/162 (98%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 334
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 326 bits (800), Expect = 1e-89
Identities = 154/162 (95%), Positives = 159/162 (98%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPP 333
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 312 bits (767), Expect = 1e-85
Identities = 147/162 (90%), Positives = 152/162 (93%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL YVA DFE E+A AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME G
Sbjct: 214 EKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAG 273
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
IHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPP
Sbjct: 274 IHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPP 333
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 157 bits (380), Expect = 1e-38
Identities = 76/162 (46%), Positives = 104/162 (64%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
E Y+ALD T ++S++ SY LPD I I N FR PE LF+P +G E G
Sbjct: 218 ENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPG 272
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 366
+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A
Sbjct: 273 MAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQ 332
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 240
ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 333 ERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 148 bits (358), Expect = 5e-36
Identities = 75/166 (45%), Positives = 101/166 (60%), Gaps = 13/166 (7%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 546
EKL Y+A D EQE A ++ L + Y LPDG+VI +G ERF PE LFQP + +E G
Sbjct: 218 EKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAG 277
Query: 545 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------AP 399
+ E + I D+D R D Y + VLSGGTTMYPG+ R++KE+ L A
Sbjct: 278 LSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAF 337
Query: 398 STMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 267
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 338 QKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (290), Expect = 8e-28
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -3
Query: 647 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 483
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 482 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 312
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 311 FQQMWISKQEYDESGPSIVHRKC 243
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 102 bits (245), Expect = 2e-22
Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 3/151 (1%)
Frame = -3
Query: 725 EKLXYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGME 555
E+ YV D+++E + + SL+ P Q I N RF C E LF+P G++
Sbjct: 389 EQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLD 448
Query: 554 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 375
G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ + P+T+ ++
Sbjct: 449 TKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVN 508
Query: 374 APPERKYSVWIGGSILASLSTFQQMWISKQE 282
P R + ++G I+AS STF+ IS Q+
Sbjct: 509 ISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 4e-19
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -3
Query: 623 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 447
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 446 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 315
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 314 TFQQMWISKQEYDESGPSI 258
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -3
Query: 623 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 444
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 443 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 273
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 272 SGPSIVHRKCF*T 234
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -3
Query: 623 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 444
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 443 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 273
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 272 SGPSIVHRKCF*T 234
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -3
Query: 521 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 357
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 356 ----YSVWIGGSILASL-STFQQMWISKQEY 279
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 345 PYGVLPLWRSNDLNLHCRWGESCD 416
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 345 PYGVLPLWRSNDLNLHCRWGESCD 416
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 345 PYGVLPLWRSNDLNLHCRWGESCD 416
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 492 LTDVHVALHDGVICGLVDAASFHTQERGLEESLWATESFVSDSDDLTVGKFVRLLEGAAG 671
+T +H A V+ G +DA + + R E + + D+LTV + +RL+ G
Sbjct: 497 ITGMHQATEGKVMIGGIDANANRAEAR---ELIGYCPQYNPIYDELTVWEHLRLVNALKG 553
Query: 672 CSGG-HFLLEVKSDVXQL 722
SGG F ++ +S + Q+
Sbjct: 554 RSGGSDFKMDAESLLKQI 571
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 657 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 538
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 657 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 538
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 615 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 502
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 615 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 502
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 615 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 502
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 615 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 502
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 615 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 502
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 181 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 273
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 284 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 183
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 181 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 273
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 365 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 204
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical
protein Y57A10B.1 protein.
Length = 470
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 588 LWATESFVSDSDDLTVGKFVRLLEGAAGCSGG 683
L++T SFVS + T + + + G +GC GG
Sbjct: 7 LFSTASFVSPATTSTTTRCMEQVGGGSGCGGG 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,688,464
Number of Sequences: 27780
Number of extensions: 359110
Number of successful extensions: 1091
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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